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The map label for this gene is 108798443

Identifier: 108798443

GI number: 108798443

Start: 1603281

End: 1604132

Strand: Reverse

Name: 108798443

Synonym: Mmcs_1472

Alternate gene names: NA

Gene position: 1604132-1603281 (Counterclockwise)

Preceding gene: 108798444

Following gene: 108798439

Centisome position: 28.12

GC content: 57.98

Gene sequence:

>852_bases
GTGTCGGACCACCACTGCACAATGGGCTGTAGCCAGCACCCAGGAAGGCCTGACATGCCACAAGCGCAGTTCACTCGTTA
CGACCTTGGCCAGCAGAAGCGTGGTGCGGCTGCGGTAGTAACTTTGCGCGGCAATGCTGCGAACGTCCTCTTACTGGATG
CCTCGAACTTCAACTCGTACCGATCCGGCCGCAGTTATCGCTACGCCGCCGGAGGGCTGGTCACGAGGTCGCCATTTCGG
CTGGTGATTCCCAGTGACGGCCACTGGTACGTCACGGTCGATCTCCGCAGTCAGGGTCCCAGTGCCCGAGTCAATTCGAC
CATCTCGATGGAACCTGCGCCTCTCCCTATTGCCCGTTCAGCCGCTCCACCGTCGCTGCAGCAGATCGAGGTGAACCGGC
CTCCGGAAGGTGCATTGCGCGGTGGAGAAACGTGGGACGTATTTATCTCCCACGCCAGTGAAGACAAAGCCAGCGTCGCA
AGGCCGTTGTTTGAAAGTCTTCGAGATCTAGGCGTTTCTGTCTGGTTCGATGAAGCTGAACTTCGAATTGGTGACAGTTT
GCGCCGAAAAATTGACCAAGGCCTTGCTCGAAGCGCTTTTGGCGTCGTTATCTTCTCCGAAGCATTCTTCGCCAAAGGTT
GGCCGCAATACGGACTCGATGGCATTGTGACGCGCACTGTGGCCGGAGAGCAGAACCTGCTTCCAATCTGGCACAAAATA
TCCAAAGACGAAGTGCGCGCTCAAAGCCCATCACTCGCGGACAAGGTCGCGCGCTCGACCTCGGATCTCGGCATAGCCGA
GATCGCCGACGAAATTGCCCGACGAGTCCGACCCGACTTGTTCGAATCGTAG

Upstream 100 bases:

>100_bases
CTTCGGGGTTGCTGGTCTCGTCAAGCTAGGGCGTCGCTGGCCCTTCTCCGGCTTTCAAACCCGCATCGAACGCCGGCCGG
GATGGTCAGCGAACCTGTTC

Downstream 100 bases:

>100_bases
TGCCGCGTCATTCCGGAGCGTTAAAACGTTCCGAAGCGTTGGCCGCAGGAGTGCCAAGCACTCGTTTGCCCAGCCGGAGA
CAAGACCCTGCCCTTGGGCT

Product: Toll-interleukin receptor

Products: NA

Alternate protein names: Lipoprotein; Tir Protein

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSDHHCTMGCSQHPGRPDMPQAQFTRYDLGQQKRGAAAVVTLRGNAANVLLLDASNFNSYRSGRSYRYAAGGLVTRSPFR
LVIPSDGHWYVTVDLRSQGPSARVNSTISMEPAPLPIARSAAPPSLQQIEVNRPPEGALRGGETWDVFISHASEDKASVA
RPLFESLRDLGVSVWFDEAELRIGDSLRRKIDQGLARSAFGVVIFSEAFFAKGWPQYGLDGIVTRTVAGEQNLLPIWHKI
SKDEVRAQSPSLADKVARSTSDLGIAEIADEIARRVRPDLFES

Sequences:

>Translated_283_residues
MSDHHCTMGCSQHPGRPDMPQAQFTRYDLGQQKRGAAAVVTLRGNAANVLLLDASNFNSYRSGRSYRYAAGGLVTRSPFR
LVIPSDGHWYVTVDLRSQGPSARVNSTISMEPAPLPIARSAAPPSLQQIEVNRPPEGALRGGETWDVFISHASEDKASVA
RPLFESLRDLGVSVWFDEAELRIGDSLRRKIDQGLARSAFGVVIFSEAFFAKGWPQYGLDGIVTRTVAGEQNLLPIWHKI
SKDEVRAQSPSLADKVARSTSDLGIAEIADEIARRVRPDLFES
>Mature_282_residues
SDHHCTMGCSQHPGRPDMPQAQFTRYDLGQQKRGAAAVVTLRGNAANVLLLDASNFNSYRSGRSYRYAAGGLVTRSPFRL
VIPSDGHWYVTVDLRSQGPSARVNSTISMEPAPLPIARSAAPPSLQQIEVNRPPEGALRGGETWDVFISHASEDKASVAR
PLFESLRDLGVSVWFDEAELRIGDSLRRKIDQGLARSAFGVVIFSEAFFAKGWPQYGLDGIVTRTVAGEQNLLPIWHKIS
KDEVRAQSPSLADKVARSTSDLGIAEIADEIARRVRPDLFES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31029; Mature: 30898

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS50104 TIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDHHCTMGCSQHPGRPDMPQAQFTRYDLGQQKRGAAAVVTLRGNAANVLLLDASNFNSY
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHH
RSGRSYRYAAGGLVTRSPFRLVIPSDGHWYVTVDLRSQGPSARVNSTISMEPAPLPIARS
HCCCCEEEECCCEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCCC
AAPPSLQQIEVNRPPEGALRGGETWDVFISHASEDKASVARPLFESLRDLGVSVWFDEAE
CCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCC
LRIGDSLRRKIDQGLARSAFGVVIFSEAFFAKGWPQYGLDGIVTRTVAGEQNLLPIWHKI
EEECHHHHHHHHHHHHHHHHEEEEEEHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHC
SKDEVRAQSPSLADKVARSTSDLGIAEIADEIARRVRPDLFES
CHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
SDHHCTMGCSQHPGRPDMPQAQFTRYDLGQQKRGAAAVVTLRGNAANVLLLDASNFNSY
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHH
RSGRSYRYAAGGLVTRSPFRLVIPSDGHWYVTVDLRSQGPSARVNSTISMEPAPLPIARS
HCCCCEEEECCCEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCCC
AAPPSLQQIEVNRPPEGALRGGETWDVFISHASEDKASVARPLFESLRDLGVSVWFDEAE
CCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCC
LRIGDSLRRKIDQGLARSAFGVVIFSEAFFAKGWPQYGLDGIVTRTVAGEQNLLPIWHKI
EEECHHHHHHHHHHHHHHHHEEEEEEHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHC
SKDEVRAQSPSLADKVARSTSDLGIAEIADEIARRVRPDLFES
CHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA