| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798394
Identifier: 108798394
GI number: 108798394
Start: 1546482
End: 1547291
Strand: Reverse
Name: 108798394
Synonym: Mmcs_1423
Alternate gene names: NA
Gene position: 1547291-1546482 (Counterclockwise)
Preceding gene: 108798401
Following gene: 108798393
Centisome position: 27.12
GC content: 61.23
Gene sequence:
>810_bases ATGAGCTGGGAAGCGCTCGAATGGGCTATCGCCATCGAGGCCTCGACACCCACAGAGCGCGTTGTCCTCATGCTGTTGGC GAACCGTGCAGACAAGAGTTTTACCTGCTACCCGTCAATCCGAAAGCTCGTGGTGGAGTCTTGTGCCGCGAAAAGCACGG TTATGAAGACGCTCAGAAGACTTGAGGACGGCGGATTCATTGTGCGTGTTGCTCGGCATCATGAATCCGGAGCCAGACGC TCAAATCGCTACCTGCTCAACCATCCTGATGCCCCGCACAGATACGCCAGTGCCGAAACCGGACTCCCCCGGTCCGACAA CGGGACTGGGCCCGTCCGATCCGTAGACAGGGAGGGTCCAACACCCACACATCAGCGGGTCCACGATTCGGACCCCTTGA ACCCTCCAGCAGAACCGTCATCCGAACCATCCTCAGCGGTGGTGCTGGGATCCCTTCCTCCACGGTGGAGAGTGAGCAAT GAGGATGCGAGAAAACTGTCGCCGGCAATCGAGGCGGCATTCGCAGCGGGCTGGACATCGCAGGCGTTGGCGACCCACCT TTCGTCTCACCCCGAGGGAGTCCGGAACCCCGCTGCTGTTCTCTCGCATCGCCTCACCGAGCTGCCAGCCCCGCCGCCGG CGCCGGCAAGGCGTAAGCCACCGTGGTGCGGGGAGTGCGAGGATCCCCAGTCGCGCACGATCTCAGTCACTCTCTCGGAT GGAACGCAGGCAGCGGCATTCTGCCCACGCTGCAGTCCACAGAAGAGTCGAGGCCAACGAGATTTCGGGGAGGTGAATCA CAATGAATAA
Upstream 100 bases:
>100_bases CAAGACGATTCACAACCGTCCAGCATTCGCCTATACGTCTTCAAGGAAGGTTGGAAGTCTCGATGGCCGATGATGCACCC AGAGACAGCGGGACGGCGCG
Downstream 100 bases:
>100_bases CACCGTGTTTGATGATCTGCCGTTGCTACTTGCCGTGCCGCGCGCGGCCAGAATTCTGGGTATCAGCCGCGCCGCCGCTT ACCGGCTCGCCGCGTCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSWEALEWAIAIEASTPTERVVLMLLANRADKSFTCYPSIRKLVVESCAAKSTVMKTLRRLEDGGFIVRVARHHESGARR SNRYLLNHPDAPHRYASAETGLPRSDNGTGPVRSVDREGPTPTHQRVHDSDPLNPPAEPSSEPSSAVVLGSLPPRWRVSN EDARKLSPAIEAAFAAGWTSQALATHLSSHPEGVRNPAAVLSHRLTELPAPPPAPARRKPPWCGECEDPQSRTISVTLSD GTQAAAFCPRCSPQKSRGQRDFGEVNHNE
Sequences:
>Translated_269_residues MSWEALEWAIAIEASTPTERVVLMLLANRADKSFTCYPSIRKLVVESCAAKSTVMKTLRRLEDGGFIVRVARHHESGARR SNRYLLNHPDAPHRYASAETGLPRSDNGTGPVRSVDREGPTPTHQRVHDSDPLNPPAEPSSEPSSAVVLGSLPPRWRVSN EDARKLSPAIEAAFAAGWTSQALATHLSSHPEGVRNPAAVLSHRLTELPAPPPAPARRKPPWCGECEDPQSRTISVTLSD GTQAAAFCPRCSPQKSRGQRDFGEVNHNE >Mature_268_residues SWEALEWAIAIEASTPTERVVLMLLANRADKSFTCYPSIRKLVVESCAAKSTVMKTLRRLEDGGFIVRVARHHESGARRS NRYLLNHPDAPHRYASAETGLPRSDNGTGPVRSVDREGPTPTHQRVHDSDPLNPPAEPSSEPSSAVVLGSLPPRWRVSNE DARKLSPAIEAAFAAGWTSQALATHLSSHPEGVRNPAAVLSHRLTELPAPPPAPARRKPPWCGECEDPQSRTISVTLSDG TQAAAFCPRCSPQKSRGQRDFGEVNHNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29335; Mature: 29204
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWEALEWAIAIEASTPTERVVLMLLANRADKSFTCYPSIRKLVVESCAAKSTVMKTLRR CCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHH LEDGGFIVRVARHHESGARRSNRYLLNHPDAPHRYASAETGLPRSDNGTGPVRSVDREGP HCCCCEEEEEECCCCCCCHHCCCEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC TPTHQRVHDSDPLNPPAEPSSEPSSAVVLGSLPPRWRVSNEDARKLSPAIEAAFAAGWTS CCHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH QALATHLSSHPEGVRNPAAVLSHRLTELPAPPPAPARRKPPWCGECEDPQSRTISVTLSD HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC GTQAAAFCPRCSPQKSRGQRDFGEVNHNE CCCHHHHCCCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure SWEALEWAIAIEASTPTERVVLMLLANRADKSFTCYPSIRKLVVESCAAKSTVMKTLRR CCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHH LEDGGFIVRVARHHESGARRSNRYLLNHPDAPHRYASAETGLPRSDNGTGPVRSVDREGP HCCCCEEEEEECCCCCCCHHCCCEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC TPTHQRVHDSDPLNPPAEPSSEPSSAVVLGSLPPRWRVSNEDARKLSPAIEAAFAAGWTS CCHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH QALATHLSSHPEGVRNPAAVLSHRLTELPAPPPAPARRKPPWCGECEDPQSRTISVTLSD HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC GTQAAAFCPRCSPQKSRGQRDFGEVNHNE CCCHHHHCCCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA