| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is mshA [H]
Identifier: 108798249
GI number: 108798249
Start: 1385599
End: 1386825
Strand: Direct
Name: mshA [H]
Synonym: Mmcs_1278
Alternate gene names: 108798249
Gene position: 1385599-1386825 (Clockwise)
Preceding gene: 108798246
Following gene: 108798251
Centisome position: 24.29
GC content: 70.25
Gene sequence:
>1227_bases ATGAAGATCGCAATGGTTTCGGAACACGCCAGCCCACTGGCGGCGCTCGGCGGGGTGGACGTCGGCGGACAGAACGTCCG TGTGGCCGAACTGTCGGCCGCCATGGCGCGCCGTGGCCACGACGTCACCGTCTACACCCGCCGCGACGATCCGGATCTGC CCGAACGTGTCAGCACGCCACAGGGTTACACCGTGGTGCATGTGCCCGCCGGGCCCGCGTGCCGACTGCCCGAGGACGAA CTGCTGGTCCACACGGGTCCGTTCGCGCAGCACCTCGACCAACAGTGGAGTGCCGATCGGCCCGACGTGGCCCACGCGCA TTTCTGGATGTCGGGCATCGCCACCCAGTTGGCCGCCCGGCATCTCGATCTGCCTGCGGTGCAGACCTTTCACGCCCTCG GTGTGGTCGAACGCCGCCACCAGGGTTCGCACGACACCAGTCCCGAGGACCGGCTCAAGCTGGAGGCGATGGTGGCCCGC ACCGCCACCTGGGTAGCGGCCACGTGCACCGACGAGGTGTTCGAGCTCATGCGGCTCGGCCGGTCACGCAGCCGGATCTC GGTGGTGCCGTGCGGGGTCGACCTCGACCTCTTCACCCCGGACGGTCCGCGTGCCGAACGCGGTGCGCGGCACCGCATCG TCAGCGTCGGAAGGCTCCTGCCCCGCAAGGGTTTCGACGTGGTCGTGCGCGCACTGACGGCGATTCCGGAGGCAGAACTC ATCCTGGTCGGAGGACCCGAACGCAGCGAGGTGGAGGCGGACCCCGAGGCCCGCCGGCTGCGTGAGCTCGCCGAGCGGCT CGGTGTCGGTGACCGGGTGGTCTTCCAGGGTGCCGTGGCTCGCGCGGACATGCCCGCTCTGCTGCGGTCGGCCGACGTGG TCGCCTGTACCCCATGGTACGAACCGTTCGGCATCGTCCCGTTGGAGGCGATGGCGTCGGGTGTGCCCGTGGTGGCCGCA GCGGTCGGCGCGATGCTCGACACCGTCGTTCAGGACGTCACCGGGCGGCTGGTCGCCGCGAGGCGCCCGGGGGAGGTCGC CGATGCCATCAACACCCTGCTGCACGACGAATTCCTCGGACAGAGCCTCGGTGCCGCCGGACGCGACCGCGCCCGGGCCC GATACTCGTGGGACCGCATCGCCGAAGACACCCTGCGCATCTACGACCGCCTGGTGCCCGCCGCCTCTCGGCCGCAGGCA GCGAGGACGTCCGTTTCGTCAGTATGA
Upstream 100 bases:
>100_bases ATCGCAGTCGGCGACGTGCATCCGCCGGCCGACCGTTCCTGCGCGATTGGAACAGGTTGATCGCCGACTGCTCCAGTCGA CATCGCGGGAGGGGAAGCCA
Downstream 100 bases:
>100_bases GGGCGTCAGCGGACCCGTGGGCCGAATCATGTTGGGGCAACGCTAATCCCGCGGTCCATGGCACCGTCGTCGACGGCACG GGTCGATCTCGACTACCGAC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MKIAMVSEHASPLAALGGVDVGGQNVRVAELSAAMARRGHDVTVYTRRDDPDLPERVSTPQGYTVVHVPAGPACRLPEDE LLVHTGPFAQHLDQQWSADRPDVAHAHFWMSGIATQLAARHLDLPAVQTFHALGVVERRHQGSHDTSPEDRLKLEAMVAR TATWVAATCTDEVFELMRLGRSRSRISVVPCGVDLDLFTPDGPRAERGARHRIVSVGRLLPRKGFDVVVRALTAIPEAEL ILVGGPERSEVEADPEARRLRELAERLGVGDRVVFQGAVARADMPALLRSADVVACTPWYEPFGIVPLEAMASGVPVVAA AVGAMLDTVVQDVTGRLVAARRPGEVADAINTLLHDEFLGQSLGAAGRDRARARYSWDRIAEDTLRIYDRLVPAASRPQA ARTSVSSV
Sequences:
>Translated_408_residues MKIAMVSEHASPLAALGGVDVGGQNVRVAELSAAMARRGHDVTVYTRRDDPDLPERVSTPQGYTVVHVPAGPACRLPEDE LLVHTGPFAQHLDQQWSADRPDVAHAHFWMSGIATQLAARHLDLPAVQTFHALGVVERRHQGSHDTSPEDRLKLEAMVAR TATWVAATCTDEVFELMRLGRSRSRISVVPCGVDLDLFTPDGPRAERGARHRIVSVGRLLPRKGFDVVVRALTAIPEAEL ILVGGPERSEVEADPEARRLRELAERLGVGDRVVFQGAVARADMPALLRSADVVACTPWYEPFGIVPLEAMASGVPVVAA AVGAMLDTVVQDVTGRLVAARRPGEVADAINTLLHDEFLGQSLGAAGRDRARARYSWDRIAEDTLRIYDRLVPAASRPQA ARTSVSSV >Mature_408_residues MKIAMVSEHASPLAALGGVDVGGQNVRVAELSAAMARRGHDVTVYTRRDDPDLPERVSTPQGYTVVHVPAGPACRLPEDE LLVHTGPFAQHLDQQWSADRPDVAHAHFWMSGIATQLAARHLDLPAVQTFHALGVVERRHQGSHDTSPEDRLKLEAMVAR TATWVAATCTDEVFELMRLGRSRSRISVVPCGVDLDLFTPDGPRAERGARHRIVSVGRLLPRKGFDVVVRALTAIPEAEL ILVGGPERSEVEADPEARRLRELAERLGVGDRVVFQGAVARADMPALLRSADVVACTPWYEPFGIVPLEAMASGVPVVAA AVGAMLDTVVQDVTGRLVAARRPGEVADAINTLLHDEFLGQSLGAAGRDRARARYSWDRIAEDTLRIYDRLVPAASRPQA ARTSVSSV
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
Organism=Homo sapiens, GI11863130, Length=411, Percent_Identity=24.5742092457421, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI14861836, Length=195, Percent_Identity=27.1794871794872, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI21357469, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 44141; Mature: 44141
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAMVSEHASPLAALGGVDVGGQNVRVAELSAAMARRGHDVTVYTRRDDPDLPERVSTP CEEEEECCCCCCHHHHCCCCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCC QGYTVVHVPAGPACRLPEDELLVHTGPFAQHLDQQWSADRPDVAHAHFWMSGIATQLAAR CCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH HLDLPAVQTFHALGVVERRHQGSHDTSPEDRLKLEAMVARTATWVAATCTDEVFELMRLG HCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RSRSRISVVPCGVDLDLFTPDGPRAERGARHRIVSVGRLLPRKGFDVVVRALTAIPEAEL CCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCE ILVGGPERSEVEADPEARRLRELAERLGVGDRVVFQGAVARADMPALLRSADVVACTPWY EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHCCCEEEECCCC EPFGIVPLEAMASGVPVVAAAVGAMLDTVVQDVTGRLVAARRPGEVADAINTLLHDEFLG CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH QSLGAAGRDRARARYSWDRIAEDTLRIYDRLVPAASRPQAARTSVSSV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC >Mature Secondary Structure MKIAMVSEHASPLAALGGVDVGGQNVRVAELSAAMARRGHDVTVYTRRDDPDLPERVSTP CEEEEECCCCCCHHHHCCCCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCC QGYTVVHVPAGPACRLPEDELLVHTGPFAQHLDQQWSADRPDVAHAHFWMSGIATQLAAR CCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH HLDLPAVQTFHALGVVERRHQGSHDTSPEDRLKLEAMVARTATWVAATCTDEVFELMRLG HCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RSRSRISVVPCGVDLDLFTPDGPRAERGARHRIVSVGRLLPRKGFDVVVRALTAIPEAEL CCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCE ILVGGPERSEVEADPEARRLRELAERLGVGDRVVFQGAVARADMPALLRSADVVACTPWY EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHCCCEEEECCCC EPFGIVPLEAMASGVPVVAAAVGAMLDTVVQDVTGRLVAARRPGEVADAINTLLHDEFLG CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH QSLGAAGRDRARARYSWDRIAEDTLRIYDRLVPAASRPQAARTSVSSV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA