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The map label for this gene is paaE [C]

Identifier: 108798229

GI number: 108798229

Start: 1360391

End: 1361458

Strand: Direct

Name: paaE [C]

Synonym: Mmcs_1258

Alternate gene names: 108798229

Gene position: 1360391-1361458 (Clockwise)

Preceding gene: 108798226

Following gene: 108798230

Centisome position: 23.84

GC content: 72.28

Gene sequence:

>1068_bases
ATGTTCACTGAAACGCGCACACGGAGCCTGCGGGAGCGGGTGCTGCGCTCTCCGCTGCTCGACCTGCTGACCGGGCCGCA
CGGCGTGGACCGGTACACCGAGCTCGTGACCCCGACGTGGACGCTGGGCGAGGCCCGGGCCAGGGTCGTCGCGGTCCGTC
GGCAGACTGCCCGCAGCGTCACGCTGACGCTGGAACCGAATCAGGTGTTCACCGGGTTTCGCGCCGGCCAGCACATCAAC
CTCAGCGTCGAGATCGACGGCCGCCGTCGCACCCGGTGCTACTCACCCGCCAGCGCCGAGGGCGCGGCGCTGATCGAGCT
GACGGTCGGTCGCCACGACGGCGGCCTGGTGTCGACGTACCTGTCCGATCACGCCCGCCCCGGAATGGTCGTCGGCCTCG
ACTCGGTCGGCGGTGACTTCACCATGCCGACGACCCGGCCGCGGCGGATCCTGTTCGTCGCCGGTGGCAGCGGCATCACC
CCGGTGTTGTCGATGCTGCGGACTCTCCGGGCGGAGGGCTCCGACCGCGAGGTGGCATTCGTCCACTACGCCCGCAGCGC
CGCCGAAGCCTGCTACCGCGACGAGCTCGCCGCGATGTCGGGTGTGCGGGTGTTGCACGGCTACACCCGCGACACCACCG
GGTCCGACCTGACCGGCCGCTTCGACGCCGACCATCTCGCCGCCGCGATGCCCGACGCCGACGCGGTGTTCGTCTGCGGT
CCGCCCGATCTGGTCGACGCCGTGCGCCGGATCCGCCCGGACGCCCTGGCCGAGTCGTTCGTGCCGCCGACGTGGGACGC
GCCGGCCGAGGCATCGGGCGGGCAGGTCAGCTTCGCCGACAGCGGCGTCGCGGTGACCGACGACGGGCGCCCCCTGCTCG
AGCAGGCCGAGGCCGCCGGGCTCACCCCCGAGAGCGGGTGCCGAATGGGCATCTGCCACAGCTGCACCCGCCGCAAGACC
AGCGGCGTGGTCAAGAACCTCATCACCGGCGCGGTGTCGGGGGTCGACGAGGAGGACGTGCAGATCTGCGTGTCCGCACC
CGTCGGCGACGTCGAGATCGCGCTCTAG

Upstream 100 bases:

>100_bases
TGTGCGTGAACTGGGTGTACGACTGTTCACGATGTGAAACCTACCACAAGCTGGGTCGATAACCTTGACGGCATCCACCG
TAACCGCGGATGGTATACAT

Downstream 100 bases:

>100_bases
GAAAGGAATCAGCCATGACTTCCACCATCACCCCCGCACCCCCGCAACGGGGCGTCGAGAAGACCGTCGCCGGCCAGCCC
GTGCGCCTGTCCGCCGAACA

Product: oxidoreductase FAD-binding region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MFTETRTRSLRERVLRSPLLDLLTGPHGVDRYTELVTPTWTLGEARARVVAVRRQTARSVTLTLEPNQVFTGFRAGQHIN
LSVEIDGRRRTRCYSPASAEGAALIELTVGRHDGGLVSTYLSDHARPGMVVGLDSVGGDFTMPTTRPRRILFVAGGSGIT
PVLSMLRTLRAEGSDREVAFVHYARSAAEACYRDELAAMSGVRVLHGYTRDTTGSDLTGRFDADHLAAAMPDADAVFVCG
PPDLVDAVRRIRPDALAESFVPPTWDAPAEASGGQVSFADSGVAVTDDGRPLLEQAEAAGLTPESGCRMGICHSCTRRKT
SGVVKNLITGAVSGVDEEDVQICVSAPVGDVEIAL

Sequences:

>Translated_355_residues
MFTETRTRSLRERVLRSPLLDLLTGPHGVDRYTELVTPTWTLGEARARVVAVRRQTARSVTLTLEPNQVFTGFRAGQHIN
LSVEIDGRRRTRCYSPASAEGAALIELTVGRHDGGLVSTYLSDHARPGMVVGLDSVGGDFTMPTTRPRRILFVAGGSGIT
PVLSMLRTLRAEGSDREVAFVHYARSAAEACYRDELAAMSGVRVLHGYTRDTTGSDLTGRFDADHLAAAMPDADAVFVCG
PPDLVDAVRRIRPDALAESFVPPTWDAPAEASGGQVSFADSGVAVTDDGRPLLEQAEAAGLTPESGCRMGICHSCTRRKT
SGVVKNLITGAVSGVDEEDVQICVSAPVGDVEIAL
>Mature_355_residues
MFTETRTRSLRERVLRSPLLDLLTGPHGVDRYTELVTPTWTLGEARARVVAVRRQTARSVTLTLEPNQVFTGFRAGQHIN
LSVEIDGRRRTRCYSPASAEGAALIELTVGRHDGGLVSTYLSDHARPGMVVGLDSVGGDFTMPTTRPRRILFVAGGSGIT
PVLSMLRTLRAEGSDREVAFVHYARSAAEACYRDELAAMSGVRVLHGYTRDTTGSDLTGRFDADHLAAAMPDADAVFVCG
PPDLVDAVRRIRPDALAESFVPPTWDAPAEASGGQVSFADSGVAVTDDGRPLLEQAEAAGLTPESGCRMGICHSCTRRKT
SGVVKNLITGAVSGVDEEDVQICVSAPVGDVEIAL

Specific function: This is an electron transfer partner for desA3 [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787658, Length=308, Percent_Identity=26.9480519480519, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1787098, Length=318, Percent_Identity=26.4150943396226, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788903, Length=209, Percent_Identity=28.2296650717703, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37917; Mature: 37917

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTETRTRSLRERVLRSPLLDLLTGPHGVDRYTELVTPTWTLGEARARVVAVRRQTARSV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEECCHHHHHHHHHHHHCCCEE
TLTLEPNQVFTGFRAGQHINLSVEIDGRRRTRCYSPASAEGAALIELTVGRHDGGLVSTY
EEEECCCHHHHHCCCCCEEEEEEEECCCCCCEECCCCCCCCEEEEEEEECCCCCCCHHHH
LSDHARPGMVVGLDSVGGDFTMPTTRPRRILFVAGGSGITPVLSMLRTLRAEGSDREVAF
HHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEE
VHYARSAAEACYRDELAAMSGVRVLHGYTRDTTGSDLTGRFDADHLAAAMPDADAVFVCG
EEHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEC
PPDLVDAVRRIRPDALAESFVPPTWDAPAEASGGQVSFADSGVAVTDDGRPLLEQAEAAG
CHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHCC
LTPESGCRMGICHSCTRRKTSGVVKNLITGAVSGVDEEDVQICVSAPVGDVEIAL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEC
>Mature Secondary Structure
MFTETRTRSLRERVLRSPLLDLLTGPHGVDRYTELVTPTWTLGEARARVVAVRRQTARSV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEECCHHHHHHHHHHHHCCCEE
TLTLEPNQVFTGFRAGQHINLSVEIDGRRRTRCYSPASAEGAALIELTVGRHDGGLVSTY
EEEECCCHHHHHCCCCCEEEEEEEECCCCCCEECCCCCCCCEEEEEEEECCCCCCCHHHH
LSDHARPGMVVGLDSVGGDFTMPTTRPRRILFVAGGSGITPVLSMLRTLRAEGSDREVAF
HHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEE
VHYARSAAEACYRDELAAMSGVRVLHGYTRDTTGSDLTGRFDADHLAAAMPDADAVFVCG
EEHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEC
PPDLVDAVRRIRPDALAESFVPPTWDAPAEASGGQVSFADSGVAVTDDGRPLLEQAEAAG
CHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHCC
LTPESGCRMGICHSCTRRKTSGVVKNLITGAVSGVDEEDVQICVSAPVGDVEIAL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]