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The map label for this gene is yagA [C]

Identifier: 108798226

GI number: 108798226

Start: 1358242

End: 1359231

Strand: Direct

Name: yagA [C]

Synonym: Mmcs_1255

Alternate gene names: 108798226

Gene position: 1358242-1359231 (Clockwise)

Preceding gene: 108798224

Following gene: 108798229

Centisome position: 23.81

GC content: 65.45

Gene sequence:

>990_bases
GTGTCCCACCGTAATGCCCCGTTGTCCGAAACCGGTCGTCTGAGGCTGGCTCGCTGCGTCGTTGAGGAGGGCTGGCCGCT
GCGCCGGGCTGCTGAGCGGTACCAGGTCGCTGTGACCACTGCGGCCCGGTGGGCCAGCCGATACCGGGAGCTGGGTCCAG
CCGGCATGGTCGATCGCAGCTCCCGGCCGCACCGCAGTCCCAATCAGACGCCGACTCGCACCGAACGGCGGATCATCAAA
GTCCGGGTACTGCGCCGGTGGGGACCTGCTCGGATCGGCTATCTGTTGGGCATTCATCCCTCCACTGTCCATCGGGTCCT
GACCCGCTACGGGCTGGCCAAACTGTGCTGGTTAGACCGACCCACTGGCCGGGTTGTCCGACGCATCGAAACCTCCCGGT
GCGGGGAGCTGGTGCATGTCGATGTCAAGAAACTCGGCAAGATCCCCGCCGGTGGCGGCTGGCGAATGTTGGGCCGCACG
ATCGGCAACCGCAACTCCAAGGCCGATACGAGCTCGGGGCGTCGCAACAAGTACCGGACCCCGCTGCGCGGTCACCATTT
TCTGCACACCGCGATCGACGCCCACTCGCGGTTGGCCTACTCCGAACTCCTGGCCGATGAACGCAAAGAGACCTCGGCGG
GGTTCTGGTTACGGGCCAACGCCTGGTTCGCTGAGTGTGGCATCACTGTGCGGAAAGTGTTGACCGACAATGGCTCCTGC
TACCGATCCCACGCCTTCCGCGACGCACTTGGCGGCATCGAGCACCGGCGCACCCGCCCGTACCGGCCGCAGACCAACGG
CAAGGTGGAGAGATTTCACCGCACCCTGGCCGATGAATGGGCCTACGTCCGGCTCTACACCAGCGACTCCGAACGCTGCG
AGCAGTTCCCGATCTGGCTGCACACCTACAATCACCACCGCGGCCACACCGCACTCGGCGGTCAACCACCCGCCAGCCGC
GTACCTAACCTGTCAGGTCAGTACAGCTAG

Upstream 100 bases:

>100_bases
TGACCACGGACGTTGGTGACGGCGTGGCTTGGTGACATGACGAAGACCTCCGAGTGAAGTGCGAGCTGTCTAGGAACGCA
CTCATTCACCGGAGGTCTTC

Downstream 100 bases:

>100_bases
CCGCTCGTCGCCTTTCCGGTGAAAAGCCATACCGTGAGCCACACGGTGGCCGCCGCGACGAACAGCGCACCGGGAATGTG
GAGGTAGATGGTGGTGGTTT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Integrase Catalytic Region; Integrase Family Protein; Transposase For ISMyma; Integrase Catalytic Domain-Containing Protein; ISBm3 Transposase Programmed; Histidine Kinase; ISAca1 Transposase; Transposase ; Integrase; Transposase For Tn; Insertion Element ISCmi2 Transposase; Insertion Sequence Transposase Protein; Transposase Integrase Domain; Transposase Undefined; Insertion Element; Transposase Of; Transposase Integrase; LOW QUALITY PROTEIN Transposase ; ISBm3 Transposase Programmed Frameshift

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSHRNAPLSETGRLRLARCVVEEGWPLRRAAERYQVAVTTAARWASRYRELGPAGMVDRSSRPHRSPNQTPTRTERRIIK
VRVLRRWGPARIGYLLGIHPSTVHRVLTRYGLAKLCWLDRPTGRVVRRIETSRCGELVHVDVKKLGKIPAGGGWRMLGRT
IGNRNSKADTSSGRRNKYRTPLRGHHFLHTAIDAHSRLAYSELLADERKETSAGFWLRANAWFAECGITVRKVLTDNGSC
YRSHAFRDALGGIEHRRTRPYRPQTNGKVERFHRTLADEWAYVRLYTSDSERCEQFPIWLHTYNHHRGHTALGGQPPASR
VPNLSGQYS

Sequences:

>Translated_329_residues
MSHRNAPLSETGRLRLARCVVEEGWPLRRAAERYQVAVTTAARWASRYRELGPAGMVDRSSRPHRSPNQTPTRTERRIIK
VRVLRRWGPARIGYLLGIHPSTVHRVLTRYGLAKLCWLDRPTGRVVRRIETSRCGELVHVDVKKLGKIPAGGGWRMLGRT
IGNRNSKADTSSGRRNKYRTPLRGHHFLHTAIDAHSRLAYSELLADERKETSAGFWLRANAWFAECGITVRKVLTDNGSC
YRSHAFRDALGGIEHRRTRPYRPQTNGKVERFHRTLADEWAYVRLYTSDSERCEQFPIWLHTYNHHRGHTALGGQPPASR
VPNLSGQYS
>Mature_328_residues
SHRNAPLSETGRLRLARCVVEEGWPLRRAAERYQVAVTTAARWASRYRELGPAGMVDRSSRPHRSPNQTPTRTERRIIKV
RVLRRWGPARIGYLLGIHPSTVHRVLTRYGLAKLCWLDRPTGRVVRRIETSRCGELVHVDVKKLGKIPAGGGWRMLGRTI
GNRNSKADTSSGRRNKYRTPLRGHHFLHTAIDAHSRLAYSELLADERKETSAGFWLRANAWFAECGITVRKVLTDNGSCY
RSHAFRDALGGIEHRRTRPYRPQTNGKVERFHRTLADEWAYVRLYTSDSERCEQFPIWLHTYNHHRGHTALGGQPPASRV
PNLSGQYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786462, Length=343, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37707; Mature: 37576

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRNAPLSETGRLRLARCVVEEGWPLRRAAERYQVAVTTAARWASRYRELGPAGMVDRS
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEHHHHHHHHHHHHHHCCCCCCCCCC
SRPHRSPNQTPTRTERRIIKVRVLRRWGPARIGYLLGIHPSTVHRVLTRYGLAKLCWLDR
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHEEECCHHHHHHHHHHHHHHHHHHCCC
PTGRVVRRIETSRCGELVHVDVKKLGKIPAGGGWRMLGRTIGNRNSKADTSSGRRNKYRT
CHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
PLRGHHFLHTAIDAHSRLAYSELLADERKETSAGFWLRANAWFAECGITVRKVLTDNGSC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCHHHHHHHCCCCCH
YRSHAFRDALGGIEHRRTRPYRPQTNGKVERFHRTLADEWAYVRLYTSDSERCEQFPIWL
HHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHCCEEE
HTYNHHRGHTALGGQPPASRVPNLSGQYS
EECCCCCCCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure 
SHRNAPLSETGRLRLARCVVEEGWPLRRAAERYQVAVTTAARWASRYRELGPAGMVDRS
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEHHHHHHHHHHHHHHCCCCCCCCCC
SRPHRSPNQTPTRTERRIIKVRVLRRWGPARIGYLLGIHPSTVHRVLTRYGLAKLCWLDR
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHEEECCHHHHHHHHHHHHHHHHHHCCC
PTGRVVRRIETSRCGELVHVDVKKLGKIPAGGGWRMLGRTIGNRNSKADTSSGRRNKYRT
CHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
PLRGHHFLHTAIDAHSRLAYSELLADERKETSAGFWLRANAWFAECGITVRKVLTDNGSC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCHHHHHHHCCCCCH
YRSHAFRDALGGIEHRRTRPYRPQTNGKVERFHRTLADEWAYVRLYTSDSERCEQFPIWL
HHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHCCEEE
HTYNHHRGHTALGGQPPASRVPNLSGQYS
EECCCCCCCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA