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The map label for this gene is abgA [C]

Identifier: 108798217

GI number: 108798217

Start: 1348994

End: 1350166

Strand: Direct

Name: abgA [C]

Synonym: Mmcs_1246

Alternate gene names: 108798217

Gene position: 1348994-1350166 (Clockwise)

Preceding gene: 108798216

Following gene: 108798220

Centisome position: 23.64

GC content: 71.01

Gene sequence:

>1173_bases
GTGAGCGTGCTCAGACATGCCGCCGCGCGCTGGCTGTCGGCCAACTACGACGAGCTCGTGGCCTGGCGCCGCCACATCCA
TGCCAACCCGGAACTGGGCCGTCAGGAGTTCGCGACGACGCAGTTCGTCGCCGCCCGTCTCGCCGACGCCGGGCTCAACC
CCAAGGTCATGCCCGGCGGGACGGGGTTGACCTGTGATTTCGGCCCCCAGCACGGCCCGCGGATCGCGCTGCGCGCCGAT
ATGGACGCACTGCCCATGGCCGAGCGGACGGGCCTGCCGTTCTCGTCGACCGTGCCGAACGTCGCGCACGCCTGCGGTCA
CGACGCGCACACCGCGATCCTGCTGGGTGCGGCAATGGCGATGGCGTCGGTGCCCGAACTACCCGTCGGCGTGCGGCTGA
TCTTCCAGGCCGCCGAGGAGTTAATGCCCGGCGGCGCGATCGACGCGATCGCGGCCGGCGCGCTGAGCGGGGTGTCGCGG
ATCTACGCGCTGCACTGCGATCCCCGGCTGGCCGTCGGCCGGGTGGCGGTGCGGCCCGGCCCGATCACGTCGGCTGCCGA
TCAGGTCGAGGTGACGCTGCACTCGCCCGGCGGGCACACCTCGCGTCCGCACCTGACCGGTGACCTCGTCTACGGGCTCG
GCACGCTGATCACCGGGGTTCCCGGTGTGCTCTCGCGCCGCATCGACCCGCGCAACAGCACCGTGATGGTGTGGGGTGCG
GTCAACGCCGGCGTCGCCGCCAACGCGATCCCGCAGACCGGCACGCTGGCCGGAACCATCCGCACCGCATCGCGGGAGAC
CTGGCTGACGCTGGAAGACATTGTGCGCGACATCGTTTCGTCATTACTGGCGCCGCTGAGGATCGAGCACAGCGTGCTGT
ACCGCCGCGGTGTGCCGCCGGTGGTCAACGAGGAGGTCTCCACCCGCATCCTCACCCACGCGATCGAGGCGATCGGCCCC
GAGGTGCTCGCCGACACCCGTCAGTCCGGCGGCGGTGAGGATTTCTCGTGGTACCTCGAAGAAGTGCCGGGGGCGATGGC
GCGGCTCGGGGTGTGGAGCGGCCGGGGGCCGCAGCTCGATCTGCACCAGCCGACGTTCGACCTCGACGAACGCGCGCTGG
GCGTGGGGGTGCGCGCGCTGGTCAACATCGTCGAACAGGCCGCCCTCCTCTAA

Upstream 100 bases:

>100_bases
TCGTCGAGGGTGCGATCATGTTGGCCCGCACTGTGGTTCGTCTCGCCGAGACGCCCGCGGAGCGGGACCGGGTGTTGCAG
CGGCAGGAGAGGCGGGCGTC

Downstream 100 bases:

>100_bases
CGAGTGCTCAGTCGTCGAGTTCGATCACCGGCATCGGCTGGGTCGGCACCTCCGCGACCGCCATCTTGGCCGCCGAATCC
GGTGGGATGACGTCGCGCGC

Product: peptidase M20D, amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSVLRHAAARWLSANYDELVAWRRHIHANPELGRQEFATTQFVAARLADAGLNPKVMPGGTGLTCDFGPQHGPRIALRAD
MDALPMAERTGLPFSSTVPNVAHACGHDAHTAILLGAAMAMASVPELPVGVRLIFQAAEELMPGGAIDAIAAGALSGVSR
IYALHCDPRLAVGRVAVRPGPITSAADQVEVTLHSPGGHTSRPHLTGDLVYGLGTLITGVPGVLSRRIDPRNSTVMVWGA
VNAGVAANAIPQTGTLAGTIRTASRETWLTLEDIVRDIVSSLLAPLRIEHSVLYRRGVPPVVNEEVSTRILTHAIEAIGP
EVLADTRQSGGGEDFSWYLEEVPGAMARLGVWSGRGPQLDLHQPTFDLDERALGVGVRALVNIVEQAALL

Sequences:

>Translated_390_residues
MSVLRHAAARWLSANYDELVAWRRHIHANPELGRQEFATTQFVAARLADAGLNPKVMPGGTGLTCDFGPQHGPRIALRAD
MDALPMAERTGLPFSSTVPNVAHACGHDAHTAILLGAAMAMASVPELPVGVRLIFQAAEELMPGGAIDAIAAGALSGVSR
IYALHCDPRLAVGRVAVRPGPITSAADQVEVTLHSPGGHTSRPHLTGDLVYGLGTLITGVPGVLSRRIDPRNSTVMVWGA
VNAGVAANAIPQTGTLAGTIRTASRETWLTLEDIVRDIVSSLLAPLRIEHSVLYRRGVPPVVNEEVSTRILTHAIEAIGP
EVLADTRQSGGGEDFSWYLEEVPGAMARLGVWSGRGPQLDLHQPTFDLDERALGVGVRALVNIVEQAALL
>Mature_389_residues
SVLRHAAARWLSANYDELVAWRRHIHANPELGRQEFATTQFVAARLADAGLNPKVMPGGTGLTCDFGPQHGPRIALRADM
DALPMAERTGLPFSSTVPNVAHACGHDAHTAILLGAAMAMASVPELPVGVRLIFQAAEELMPGGAIDAIAAGALSGVSRI
YALHCDPRLAVGRVAVRPGPITSAADQVEVTLHSPGGHTSRPHLTGDLVYGLGTLITGVPGVLSRRIDPRNSTVMVWGAV
NAGVAANAIPQTGTLAGTIRTASRETWLTLEDIVRDIVSSLLAPLRIEHSVLYRRGVPPVVNEEVSTRILTHAIEAIGPE
VLADTRQSGGGEDFSWYLEEVPGAMARLGVWSGRGPQLDLHQPTFDLDERALGVGVRALVNIVEQAALL

Specific function: ATP-dependent carboxylate-amine ligase [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the peptidase M20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011793
- InterPro:   IPR006336
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF04107 GCS2; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 41254; Mature: 41123

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLRHAAARWLSANYDELVAWRRHIHANPELGRQEFATTQFVAARLADAGLNPKVMPGG
CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
TGLTCDFGPQHGPRIALRADMDALPMAERTGLPFSSTVPNVAHACGHDAHTAILLGAAMA
CCCEECCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
MASVPELPVGVRLIFQAAEELMPGGAIDAIAAGALSGVSRIYALHCDPRLAVGRVAVRPG
HHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCCEECEEEECCC
PITSAADQVEVTLHSPGGHTSRPHLTGDLVYGLGTLITGVPGVLSRRIDPRNSTVMVWGA
CCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEC
VNAGVAANAIPQTGTLAGTIRTASRETWLTLEDIVRDIVSSLLAPLRIEHSVLYRRGVPP
CCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VVNEEVSTRILTHAIEAIGPEVLADTRQSGGGEDFSWYLEEVPGAMARLGVWSGRGPQLD
CCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCC
LHQPTFDLDERALGVGVRALVNIVEQAALL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVLRHAAARWLSANYDELVAWRRHIHANPELGRQEFATTQFVAARLADAGLNPKVMPGG
CHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
TGLTCDFGPQHGPRIALRADMDALPMAERTGLPFSSTVPNVAHACGHDAHTAILLGAAMA
CCCEECCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
MASVPELPVGVRLIFQAAEELMPGGAIDAIAAGALSGVSRIYALHCDPRLAVGRVAVRPG
HHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCCEECEEEECCC
PITSAADQVEVTLHSPGGHTSRPHLTGDLVYGLGTLITGVPGVLSRRIDPRNSTVMVWGA
CCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEC
VNAGVAANAIPQTGTLAGTIRTASRETWLTLEDIVRDIVSSLLAPLRIEHSVLYRRGVPP
CCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VVNEEVSTRILTHAIEAIGPEVLADTRQSGGGEDFSWYLEEVPGAMARLGVWSGRGPQLD
CCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCC
LHQPTFDLDERALGVGVRALVNIVEQAALL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA