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The map label for this gene is rutD [H]

Identifier: 108797729

GI number: 108797729

Start: 795539

End: 796384

Strand: Direct

Name: rutD [H]

Synonym: Mmcs_0750

Alternate gene names: 108797729

Gene position: 795539-796384 (Clockwise)

Preceding gene: 108797728

Following gene: 108797730

Centisome position: 13.94

GC content: 68.32

Gene sequence:

>846_bases
GTGCGCAGTCGCGCTGGGCGCGACCCACCACGCCGAAATCGCCGTCGAGTAGCGTCGGGACGCGTGAATCTCGCTTACGA
CGATCGCGGCACCGGCATCCCGGTGCTGTTCATCGCCGGTCGCGGCGGCGCCGGCCGCACCTGGCACCTGCACCAGGTCC
CGGAGTTCGTCCGCAACGGTTACCGGGCCATCACCTTCGACAACCGCGGCGTCGGCGCCACCGAGAACGCCGAGGGCTTC
GGCGTCGAGCAGATGGTCGCCGACACCGCAGCGCTCATCGAGAAACTGGGCGCCGCCCCCGTCCGCATCGTGGCGGTGTC
GATGGGCTCCTTCATCGCCCAGGAACTCATGCTGGCCCGCCCGGATCTGGTCCGGTCCGCGGTGCTGATGGCCACCCGCG
GCCGCCACGACCGGGCCCGCAACTTCTTCTCCGACGCCGAACGGGAACTGGTCGACGCCGGCATCACCCTGCCGCCACGA
TTTGACGCGAAGGTCCGTGTGCTGGAGAACTTCTCACCCAAGACGATCAACGACGACCGCGCGATCGGCGACTGGATCGA
GATGTTCACGATGTGGCCGACCAAGTACACGCCCGGTCTGCGGACCCAGGGGTCGGTGGGCCCGAAGGAGAACCGCCTGC
CCGCCTACCGCAGCATCCGCATCCCCACGCTGGTGATCGGGTTCGCCGACGACGTCCTGTTGCCCCCGCATCTGGGCAAG
GAGGTCGCCGACGCGATGCCGCACGGCCGCTATTTGGAGATCCCCGACGCCGGACACCTCGGCTTCATCGAGCGGCCGCA
GGAAGTCAACGCCGCGGCGCTGAAATTCTTCGCCGATATCCTGTAG

Upstream 100 bases:

>100_bases
GCGAAGAACTGGATCCCCAGCTACGCCGACTACGAGAAGCTGACCCAGGGGCGCACCATCCCGATCCTCGCGTTCACCGA
GACGACCGAGTGATTTCGGC

Downstream 100 bases:

>100_bases
CGATGAACCCCTCGACGGCACAGGCGCGGGTCGTCGTCGACGAACTCGTTCGCGGCGGCGTGCACGACGTCGTGCTGTGC
CCGGGGTCGCGTAACGCACC

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MRSRAGRDPPRRNRRRVASGRVNLAYDDRGTGIPVLFIAGRGGAGRTWHLHQVPEFVRNGYRAITFDNRGVGATENAEGF
GVEQMVADTAALIEKLGAAPVRIVAVSMGSFIAQELMLARPDLVRSAVLMATRGRHDRARNFFSDAERELVDAGITLPPR
FDAKVRVLENFSPKTINDDRAIGDWIEMFTMWPTKYTPGLRTQGSVGPKENRLPAYRSIRIPTLVIGFADDVLLPPHLGK
EVADAMPHGRYLEIPDAGHLGFIERPQEVNAAALKFFADIL

Sequences:

>Translated_281_residues
MRSRAGRDPPRRNRRRVASGRVNLAYDDRGTGIPVLFIAGRGGAGRTWHLHQVPEFVRNGYRAITFDNRGVGATENAEGF
GVEQMVADTAALIEKLGAAPVRIVAVSMGSFIAQELMLARPDLVRSAVLMATRGRHDRARNFFSDAERELVDAGITLPPR
FDAKVRVLENFSPKTINDDRAIGDWIEMFTMWPTKYTPGLRTQGSVGPKENRLPAYRSIRIPTLVIGFADDVLLPPHLGK
EVADAMPHGRYLEIPDAGHLGFIERPQEVNAAALKFFADIL
>Mature_281_residues
MRSRAGRDPPRRNRRRVASGRVNLAYDDRGTGIPVLFIAGRGGAGRTWHLHQVPEFVRNGYRAITFDNRGVGATENAEGF
GVEQMVADTAALIEKLGAAPVRIVAVSMGSFIAQELMLARPDLVRSAVLMATRGRHDRARNFFSDAERELVDAGITLPPR
FDAKVRVLENFSPKTINDDRAIGDWIEMFTMWPTKYTPGLRTQGSVGPKENRLPAYRSIRIPTLVIGFADDVLLPPHLGK
EVADAMPHGRYLEIPDAGHLGFIERPQEVNAAALKFFADIL

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 31094; Mature: 31094

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRAGRDPPRRNRRRVASGRVNLAYDDRGTGIPVLFIAGRGGAGRTWHLHQVPEFVRNG
CCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHCC
YRAITFDNRGVGATENAEGFGVEQMVADTAALIEKLGAAPVRIVAVSMGSFIAQELMLAR
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHC
PDLVRSAVLMATRGRHDRARNFFSDAERELVDAGITLPPRFDAKVRVLENFSPKTINDDR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCH
AIGDWIEMFTMWPTKYTPGLRTQGSVGPKENRLPAYRSIRIPTLVIGFADDVLLPPHLGK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCEEEEECCCCCCCCCCCCH
EVADAMPHGRYLEIPDAGHLGFIERPQEVNAAALKFFADIL
HHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSRAGRDPPRRNRRRVASGRVNLAYDDRGTGIPVLFIAGRGGAGRTWHLHQVPEFVRNG
CCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHCC
YRAITFDNRGVGATENAEGFGVEQMVADTAALIEKLGAAPVRIVAVSMGSFIAQELMLAR
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHC
PDLVRSAVLMATRGRHDRARNFFSDAERELVDAGITLPPRFDAKVRVLENFSPKTINDDR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCH
AIGDWIEMFTMWPTKYTPGLRTQGSVGPKENRLPAYRSIRIPTLVIGFADDVLLPPHLGK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCEEEEECCCCCCCCCCCCH
EVADAMPHGRYLEIPDAGHLGFIERPQEVNAAALKFFADIL
HHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA