| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797546
Identifier: 108797546
GI number: 108797546
Start: 627123
End: 629882
Strand: Direct
Name: 108797546
Synonym: Mmcs_0566
Alternate gene names: NA
Gene position: 627123-629882 (Clockwise)
Preceding gene: 108797545
Following gene: 108797550
Centisome position: 10.99
GC content: 71.41
Gene sequence:
>2760_bases GTGCCCCTGCAGCTCATCAGCCGCGACGCGGAGTTGAGCGCTGTCGACGACCTGCTCTCCGCAGTGCCGACGGGTACCTG CGTGCTGGTGCTCGAAGGCGATGTCGGGATCGGTAAGAGCACCGTGTGGCGCGCAGGCATCGAACGCGCCCGGACCCGCG GCTTCCGGGTGCTCGCGGCGCACCCGGTGTCCAGCGAGTCGGTGGCCGCGTACTCATCGCTGGCCGAACTGCTCGCCGAT GTGGACACCGAGGTGCTGGACCACCTGCCCGCCCCGCAACGAGTCGCGATCGACCGGGTCCTCTCTCGCGCCGACGACAC GGGACCCGGCACCGATCAACGCGCGGTGGCCGCCGCCGTCCGGTCGGTGCTCGAACGGCTGGCCCACGACAGTCCCGTCC TCGTCGCGATCGACGATCTGCAGTGGCTCGACCCGCCGACCGCCGCCGTTCTCGCGTCGGTGGCCCGCCGGTCCGCGGGC GCCATCGGTTTCCTCGTGACCGTGCGCTCCGGCGCAGGCGACCACACCGAGACGCTGCTCGAACCGTCGCGTCCGGAGCG TCTGCACCGGGCCCGGGTGCATCCGATGACGGTCGGGGGCCTGCACGCCATGATCAGCCACCAGCTGGGCCGGTCGCTGA CCCGCCCGAGAATGGACTGGGTGTACGAGGTTTCGGCCGGAAACCCGCTCTACGCCCTCGAATTGGCGCGGGCACTGGAC CGGGACGCCACCGGTGTCGGGCCGCTGCCGGCCACCCTCGCCGATCTGGTGCGGACACGCATCTCCGGTTTGCCCGACCA CACCCGGGAGGTCCTCCTCGCCACCGCCTGTATCGCGTCGCCCACCGTGGACCTGGTGGCGCGCGCCGTCGGCGACAACG TCGAGTGGACCGTCGCGGCTCTCGAGGAGGCCGAACGGCACGGCGTCGTCGAGATCACCGGCTACAAGGTGACTTTCAGC CATCCCCTGTTGGCCCGTGGCGTGTACGCCGAGGCGTCCGCGGACGAACGGCGGTGGATGCACCGCCGGTTGGCCGACAT CGTCGAGAGCCCCGAGTCCCGGGCCCGGCACCGCGCCCTCTCGAGTGACGGCGCCGACGAGCAGACGGTCAAGGCGCTCG ACGAGGCGGCCGAATCGGTCCACCTGCGCGGCGCACCCGCGACCGCCGCCGAACTGCTCGACATGGCCCGTGCCCGCGGG GGTGACACCCCTGAACGCACGCTGCGTGCCGCGGCCTGCCACTTCGAGGCGGGTGATGCCGCGCGGGCACGAGTGTTGTT GGAACACGCCCTTTCCGAGATCCCGCCGGGTGAGCTGCGGGCCCGGGCGCTGCAGCTGCTCGGTCTGGTACGGCTCTACG CCAACAGTTCGTCCGAGGCGGTGCCGATGCTCGAACAGGCCATCGCCGAGCCGGGCGTCAACCCGGACCGCCGGGTGCAC ATGCTCGTCATGTTGGCGTTCATCGAGTTCAACGCGGGGCGCGCGGACCGGGCGGTGCAGCGCGCGGAAGAAGCCGTGAC ACAGGCGATGACACTGCATCGGCCGGATCTGATCACCCAGGCCAAGCCGATTCGCGCGCTGCTGCGGTTCCTGCTCGGCG AGGGTTTCGACGAGGCTGAACTCGACGGCGTGTTCGATTTCGACGAGCCCGAGGGCCTACCGCTGGCCGCGCAGCCGAGG ACCCTGCACGCCCTGCTGATGTTGTGGACCGACCGGCTCGACGAGGCCGCCGACCAGTTCAACGCGATCGCACAGCGCTG CATCGAACGGGGCGACGAAAGCGAGCGGGCGTTTGTCGACTTCCATCTCGGGCAGGTCAACGTCTGGCGGGCCGACCTCG CGGCCGCGGAACGGGTCGCCGAGGACAGCGTCGAGCGGGCGTTGCAGTCCCACGGTGACCTGCCGCTGTTCGTCGCGTTG ATCGTGCGGGTCATGGTGAGTGCCCACTTCGGCCGCGAGGACCAGACGCGCCGGTTCGCCGCCCAGGCGCGGACGGTCGG GGAGCGGTGTGAGTCCAGCCGTCTCGGGGTGTGGCTGACTACGAGCCTGGGTTTCCTCGAGTTGTCGCTGGGCGACCACC GGGCCGCGGTGGACGTGTTGAGTCCGGCGGTCGAGGGCTGGTCGTCGGCGGCGACCGGGATCCCGGCGCCCACCGAACTC GTCACGGCGCCGTTCCTGCCGGACGCGGCGGAGGCGCTCATCGGCATCGGCCGCCTCGATGAGGCGGAACGGCTCGTCGA GGCGTTGGAGGCCAACGGAACCCGCCTCGACCGGCCGTGGATGCTCGCCCTCGGTGCGCGCTGCCGGGCGCTGCTGCTCG CCGCACGCGGTGACCTGACCGCCGCCGTCAGGGCCGGTGAGCGCGCGTTGACCGAGCACGGCCGGCTGTCGATGCCGTTC GAACTCGCCCGCACCCAACTCGTGGTCGGCCGGTTGCAACACCGGCGGCGCCAGTACGACGCCGCCACCGCCACCGTCTC GACCGCTCTCGCGGCGTTCGAGCGCATCGGGGCGGAGCTGTGGGCGCGGCAGGCCCGCGCCGAACTCGACGCGCTGACCG GTAGGCAGACCGCGGCCGGCCTCGCCGAATCCGAGCGCCGCTTCGCCGATCTCGCCGTGCAGGGGATGACGAACCGTGAG ATCGCCGCGACGCTGTACGTGAGTGAGAAGACGGTGGAGGCCAACCTGTCGCGCGTCTACCGCAGGCTGGGCATCCGTTC CCGCGGCGAGCTCGCCAGGGTGCTCAACGCCGAATCCTGA
Upstream 100 bases:
>100_bases TGATCGGCGCGGTGGCGTCGCTGTTCAACGCTGGGCGTTACGCCGAGCAAACGTGATCATCCGGTGGGCGGCCCCCACGA TCTGCTGCGAAGATACGTAG
Downstream 100 bases:
>100_bases CAGGGAGATTCAGTCTCGCAGGTCCACCAACACCGGTGCGTGGTCGCTGGCGCCCTTGCCCTTGCGTTCCTCGCGGACGA TCTCGGCGTGGGTGACCCGA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Regulatory Protein LuxR; ATPase-Like Protein; Transcriptional Regulatory Protein; Transcriptional Regulator Luxr Family; LuxR Family ATP-Dependent Transcriptional Regulator; Response Regulator Receiver Protein; Luxr Family Transcriptional Regulator
Number of amino acids: Translated: 919; Mature: 918
Protein sequence:
>919_residues MPLQLISRDAELSAVDDLLSAVPTGTCVLVLEGDVGIGKSTVWRAGIERARTRGFRVLAAHPVSSESVAAYSSLAELLAD VDTEVLDHLPAPQRVAIDRVLSRADDTGPGTDQRAVAAAVRSVLERLAHDSPVLVAIDDLQWLDPPTAAVLASVARRSAG AIGFLVTVRSGAGDHTETLLEPSRPERLHRARVHPMTVGGLHAMISHQLGRSLTRPRMDWVYEVSAGNPLYALELARALD RDATGVGPLPATLADLVRTRISGLPDHTREVLLATACIASPTVDLVARAVGDNVEWTVAALEEAERHGVVEITGYKVTFS HPLLARGVYAEASADERRWMHRRLADIVESPESRARHRALSSDGADEQTVKALDEAAESVHLRGAPATAAELLDMARARG GDTPERTLRAAACHFEAGDAARARVLLEHALSEIPPGELRARALQLLGLVRLYANSSSEAVPMLEQAIAEPGVNPDRRVH MLVMLAFIEFNAGRADRAVQRAEEAVTQAMTLHRPDLITQAKPIRALLRFLLGEGFDEAELDGVFDFDEPEGLPLAAQPR TLHALLMLWTDRLDEAADQFNAIAQRCIERGDESERAFVDFHLGQVNVWRADLAAAERVAEDSVERALQSHGDLPLFVAL IVRVMVSAHFGREDQTRRFAAQARTVGERCESSRLGVWLTTSLGFLELSLGDHRAAVDVLSPAVEGWSSAATGIPAPTEL VTAPFLPDAAEALIGIGRLDEAERLVEALEANGTRLDRPWMLALGARCRALLLAARGDLTAAVRAGERALTEHGRLSMPF ELARTQLVVGRLQHRRRQYDAATATVSTALAAFERIGAELWARQARAELDALTGRQTAAGLAESERRFADLAVQGMTNRE IAATLYVSEKTVEANLSRVYRRLGIRSRGELARVLNAES
Sequences:
>Translated_919_residues MPLQLISRDAELSAVDDLLSAVPTGTCVLVLEGDVGIGKSTVWRAGIERARTRGFRVLAAHPVSSESVAAYSSLAELLAD VDTEVLDHLPAPQRVAIDRVLSRADDTGPGTDQRAVAAAVRSVLERLAHDSPVLVAIDDLQWLDPPTAAVLASVARRSAG AIGFLVTVRSGAGDHTETLLEPSRPERLHRARVHPMTVGGLHAMISHQLGRSLTRPRMDWVYEVSAGNPLYALELARALD RDATGVGPLPATLADLVRTRISGLPDHTREVLLATACIASPTVDLVARAVGDNVEWTVAALEEAERHGVVEITGYKVTFS HPLLARGVYAEASADERRWMHRRLADIVESPESRARHRALSSDGADEQTVKALDEAAESVHLRGAPATAAELLDMARARG GDTPERTLRAAACHFEAGDAARARVLLEHALSEIPPGELRARALQLLGLVRLYANSSSEAVPMLEQAIAEPGVNPDRRVH MLVMLAFIEFNAGRADRAVQRAEEAVTQAMTLHRPDLITQAKPIRALLRFLLGEGFDEAELDGVFDFDEPEGLPLAAQPR TLHALLMLWTDRLDEAADQFNAIAQRCIERGDESERAFVDFHLGQVNVWRADLAAAERVAEDSVERALQSHGDLPLFVAL IVRVMVSAHFGREDQTRRFAAQARTVGERCESSRLGVWLTTSLGFLELSLGDHRAAVDVLSPAVEGWSSAATGIPAPTEL VTAPFLPDAAEALIGIGRLDEAERLVEALEANGTRLDRPWMLALGARCRALLLAARGDLTAAVRAGERALTEHGRLSMPF ELARTQLVVGRLQHRRRQYDAATATVSTALAAFERIGAELWARQARAELDALTGRQTAAGLAESERRFADLAVQGMTNRE IAATLYVSEKTVEANLSRVYRRLGIRSRGELARVLNAES >Mature_918_residues PLQLISRDAELSAVDDLLSAVPTGTCVLVLEGDVGIGKSTVWRAGIERARTRGFRVLAAHPVSSESVAAYSSLAELLADV DTEVLDHLPAPQRVAIDRVLSRADDTGPGTDQRAVAAAVRSVLERLAHDSPVLVAIDDLQWLDPPTAAVLASVARRSAGA IGFLVTVRSGAGDHTETLLEPSRPERLHRARVHPMTVGGLHAMISHQLGRSLTRPRMDWVYEVSAGNPLYALELARALDR DATGVGPLPATLADLVRTRISGLPDHTREVLLATACIASPTVDLVARAVGDNVEWTVAALEEAERHGVVEITGYKVTFSH PLLARGVYAEASADERRWMHRRLADIVESPESRARHRALSSDGADEQTVKALDEAAESVHLRGAPATAAELLDMARARGG DTPERTLRAAACHFEAGDAARARVLLEHALSEIPPGELRARALQLLGLVRLYANSSSEAVPMLEQAIAEPGVNPDRRVHM LVMLAFIEFNAGRADRAVQRAEEAVTQAMTLHRPDLITQAKPIRALLRFLLGEGFDEAELDGVFDFDEPEGLPLAAQPRT LHALLMLWTDRLDEAADQFNAIAQRCIERGDESERAFVDFHLGQVNVWRADLAAAERVAEDSVERALQSHGDLPLFVALI VRVMVSAHFGREDQTRRFAAQARTVGERCESSRLGVWLTTSLGFLELSLGDHRAAVDVLSPAVEGWSSAATGIPAPTELV TAPFLPDAAEALIGIGRLDEAERLVEALEANGTRLDRPWMLALGARCRALLLAARGDLTAAVRAGERALTEHGRLSMPFE LARTQLVVGRLQHRRRQYDAATATVSTALAAFERIGAELWARQARAELDALTGRQTAAGLAESERRFADLAVQGMTNREI AATLYVSEKTVEANLSRVYRRLGIRSRGELARVLNAES
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99573; Mature: 99442
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLQLISRDAELSAVDDLLSAVPTGTCVLVLEGDVGIGKSTVWRAGIERARTRGFRVLAA CCCHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEE HPVSSESVAAYSSLAELLADVDTEVLDHLPAPQRVAIDRVLSRADDTGPGTDQRAVAAAV CCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH RSVLERLAHDSPVLVAIDDLQWLDPPTAAVLASVARRSAGAIGFLVTVRSGAGDHTETLL HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHC EPSRPERLHRARVHPMTVGGLHAMISHQLGRSLTRPRMDWVYEVSAGNPLYALELARALD CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHC RDATGVGPLPATLADLVRTRISGLPDHTREVLLATACIASPTVDLVARAVGDNVEWTVAA CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHH LEEAERHGVVEITGYKVTFSHPLLARGVYAEASADERRWMHRRLADIVESPESRARHRAL HHHHHHCCCEEEEEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHH SSDGADEQTVKALDEAAESVHLRGAPATAAELLDMARARGGDTPERTLRAAACHFEAGDA CCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCH ARARVLLEHALSEIPPGELRARALQLLGLVRLYANSSSEAVPMLEQAIAEPGVNPDRRVH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHH MLVMLAFIEFNAGRADRAVQRAEEAVTQAMTLHRPDLITQAKPIRALLRFLLGEGFDEAE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCCCC LDGVFDFDEPEGLPLAAQPRTLHALLMLWTDRLDEAADQFNAIAQRCIERGDESERAFVD CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE FHLGQVNVWRADLAAAERVAEDSVERALQSHGDLPLFVALIVRVMVSAHFGREDQTRRFA EECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH AQARTVGERCESSRLGVWLTTSLGFLELSLGDHRAAVDVLSPAVEGWSSAATGIPAPTEL HHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHCHHHCCCCCCCCHHH VTAPFLPDAAEALIGIGRLDEAERLVEALEANGTRLDRPWMLALGARCRALLLAARGDLT HCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHH AAVRAGERALTEHGRLSMPFELARTQLVVGRLQHRRRQYDAATATVSTALAAFERIGAEL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WARQARAELDALTGRQTAAGLAESERRFADLAVQGMTNREIAATLYVSEKTVEANLSRVY HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHH RRLGIRSRGELARVLNAES HHHCCCCCHHHHHHHCCCC >Mature Secondary Structure PLQLISRDAELSAVDDLLSAVPTGTCVLVLEGDVGIGKSTVWRAGIERARTRGFRVLAA CCHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEE HPVSSESVAAYSSLAELLADVDTEVLDHLPAPQRVAIDRVLSRADDTGPGTDQRAVAAAV CCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH RSVLERLAHDSPVLVAIDDLQWLDPPTAAVLASVARRSAGAIGFLVTVRSGAGDHTETLL HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHC EPSRPERLHRARVHPMTVGGLHAMISHQLGRSLTRPRMDWVYEVSAGNPLYALELARALD CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHC RDATGVGPLPATLADLVRTRISGLPDHTREVLLATACIASPTVDLVARAVGDNVEWTVAA CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHH LEEAERHGVVEITGYKVTFSHPLLARGVYAEASADERRWMHRRLADIVESPESRARHRAL HHHHHHCCCEEEEEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHH SSDGADEQTVKALDEAAESVHLRGAPATAAELLDMARARGGDTPERTLRAAACHFEAGDA CCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCH ARARVLLEHALSEIPPGELRARALQLLGLVRLYANSSSEAVPMLEQAIAEPGVNPDRRVH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHH MLVMLAFIEFNAGRADRAVQRAEEAVTQAMTLHRPDLITQAKPIRALLRFLLGEGFDEAE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCCCC LDGVFDFDEPEGLPLAAQPRTLHALLMLWTDRLDEAADQFNAIAQRCIERGDESERAFVD CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE FHLGQVNVWRADLAAAERVAEDSVERALQSHGDLPLFVALIVRVMVSAHFGREDQTRRFA EECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH AQARTVGERCESSRLGVWLTTSLGFLELSLGDHRAAVDVLSPAVEGWSSAATGIPAPTEL HHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHCHHHCCCCCCCCHHH VTAPFLPDAAEALIGIGRLDEAERLVEALEANGTRLDRPWMLALGARCRALLLAARGDLT HCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHH AAVRAGERALTEHGRLSMPFELARTQLVVGRLQHRRRQYDAATATVSTALAAFERIGAEL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WARQARAELDALTGRQTAAGLAESERRFADLAVQGMTNREIAATLYVSEKTVEANLSRVY HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHH RRLGIRSRGELARVLNAES HHHCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA