| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is fgd1 [H]
Identifier: 108797512
GI number: 108797512
Start: 586437
End: 587447
Strand: Direct
Name: fgd1 [H]
Synonym: Mmcs_0532
Alternate gene names: 108797512
Gene position: 586437-587447 (Clockwise)
Preceding gene: 108797510
Following gene: 108797517
Centisome position: 10.28
GC content: 65.97
Gene sequence:
>1011_bases ATGGCTGAACTCAAACTCGGATACAAGGCGTCGGCGGAGCAGTTCGCGCCGCGGGAACTGGTCGAACTCGCGGTGGCGGC CGAAGAGCACGGTATGGACAGTGCGACGGTCAGCGACCACTTCCAGCCGTGGCGCCACGAGGGCGGACATGCGCCGTTCT CGCTGGCGTGGATGACCGCGGTGGGGGAGCGGACCAAGCGGTTGCAGTTGGGCACCTCGGTGCTCACACCGACGTTCCGC TACAACCCGGCGGTGATCGCGCAGGCGTTCGCGACGATGGCCTGTCTGTATCCGGACCGGATCTTCCTCGGTGTCGGCAC CGGTGAGGCGCTCAACGAGATCGCGACCGGTTACGAGGGCGACTGGCCGGACTTCAAGGAGCGGTTCGCGCGGCTGCGCG AGTCGGTGCGGTTGATGCGTGAGTTGTGGCTCGGCGACCGCGTCGACTTCGACGGCGAGTACTACCGCACCAAGGGTGCG TCGATCTACGACGTCCCCGAAGGCGGCGTCCCGGTGTACATCGCCGCGGGCGGGCCGGTGGTGGCGAAGTACGCCGGGCG CGCGGGGGACGGTTTCATCTGCACCTCCGGTAAGGGCGAGGAGCTGTACAAGGACAAGCTGCTGCCCGCGGTGGCCGAGG GCGCCGATGCGGCCGGGAAGAACGTCGACGATGTCGACAAGATGATCGAGATCAAGATCTCCTACGACACGGATCCCGAA CTGGCGCTGGAGAATACGCGATTCTGGGCGCCGCTGTCGTTGACCGCCGAACAGAAGCACAGCATCGACGACCCGATCGA GATGGAGAAGGCCGCCGACGAGTTGCCGATCGAGCAGGTCGCCAAACGGTGGATCGTCGCCTCGGATCCGGACGAGGCCG TCGAGAAGGTCAAGGACTACGTCGGGTGGGGCCTGAACCACCTGGTGTTCCACGCACCCGGCCACGACCAGCGTCGGTTC CTCGAGCTCTTCAAACGGGATCTGGAGCCACGACTGCGCAAGCTGGGCTGA
Upstream 100 bases:
>100_bases GGACCCGGTCGGTGACGGCCGTCAGGGCTGCTGCCATGCCGCGAGTGTAGGCAGGTGGAGTAGAAACGAGTCGTGCGCAC GCGAGGAGCAGGGAGACACC
Downstream 100 bases:
>100_bases GGCTCACCCCGCCGTCGGCGGCGCAGGCCGGCCGGTCACCCGGTAGACGCGGAAACGTTCGTCGCCGGTCGCGCCGTACA CCGAGTGCACGAGCGTGCCC
Product: luciferase-like protein
Products: NA
Alternate protein names: F420_G6P_DH [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MAELKLGYKASAEQFAPRELVELAVAAEEHGMDSATVSDHFQPWRHEGGHAPFSLAWMTAVGERTKRLQLGTSVLTPTFR YNPAVIAQAFATMACLYPDRIFLGVGTGEALNEIATGYEGDWPDFKERFARLRESVRLMRELWLGDRVDFDGEYYRTKGA SIYDVPEGGVPVYIAAGGPVVAKYAGRAGDGFICTSGKGEELYKDKLLPAVAEGADAAGKNVDDVDKMIEIKISYDTDPE LALENTRFWAPLSLTAEQKHSIDDPIEMEKAADELPIEQVAKRWIVASDPDEAVEKVKDYVGWGLNHLVFHAPGHDQRRF LELFKRDLEPRLRKLG
Sequences:
>Translated_336_residues MAELKLGYKASAEQFAPRELVELAVAAEEHGMDSATVSDHFQPWRHEGGHAPFSLAWMTAVGERTKRLQLGTSVLTPTFR YNPAVIAQAFATMACLYPDRIFLGVGTGEALNEIATGYEGDWPDFKERFARLRESVRLMRELWLGDRVDFDGEYYRTKGA SIYDVPEGGVPVYIAAGGPVVAKYAGRAGDGFICTSGKGEELYKDKLLPAVAEGADAAGKNVDDVDKMIEIKISYDTDPE LALENTRFWAPLSLTAEQKHSIDDPIEMEKAADELPIEQVAKRWIVASDPDEAVEKVKDYVGWGLNHLVFHAPGHDQRRF LELFKRDLEPRLRKLG >Mature_335_residues AELKLGYKASAEQFAPRELVELAVAAEEHGMDSATVSDHFQPWRHEGGHAPFSLAWMTAVGERTKRLQLGTSVLTPTFRY NPAVIAQAFATMACLYPDRIFLGVGTGEALNEIATGYEGDWPDFKERFARLRESVRLMRELWLGDRVDFDGEYYRTKGAS IYDVPEGGVPVYIAAGGPVVAKYAGRAGDGFICTSGKGEELYKDKLLPAVAEGADAAGKNVDDVDKMIEIKISYDTDPEL ALENTRFWAPLSLTAEQKHSIDDPIEMEKAADELPIEQVAKRWIVASDPDEAVEKVKDYVGWGLNHLVFHAPGHDQRRFL ELFKRDLEPRLRKLG
Specific function: Involved in the bioreductive activation of the prodrug PA-824 (nitroimidazo-oxazine) developed for anti-tuberculosis therapy against both replicating and persistent bacteria. It does not interact directly with PA-824 but, rather, provides reduced F420 to
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019945 - InterPro: IPR019944 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.1.99.34 [H]
Molecular weight: Translated: 37406; Mature: 37274
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELKLGYKASAEQFAPRELVELAVAAEEHGMDSATVSDHFQPWRHEGGHAPFSLAWMTA CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCCCHHHHHHHH VGERTKRLQLGTSVLTPTFRYNPAVIAQAFATMACLYPDRIFLGVGTGEALNEIATGYEG HHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCC DWPDFKERFARLRESVRLMRELWLGDRVDFDGEYYRTKGASIYDVPEGGVPVYIAAGGPV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEECCCCCEEEEEECCCCE VAKYAGRAGDGFICTSGKGEELYKDKLLPAVAEGADAAGKNVDDVDKMIEIKISYDTDPE EEHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCEEEEEEECCCCCC LALENTRFWAPLSLTAEQKHSIDDPIEMEKAADELPIEQVAKRWIVASDPDEAVEKVKDY EEECCCEEEEEEECCCHHHCCCCCCHHHHHHHHCCCHHHHHHHCEECCCHHHHHHHHHHH VGWGLNHLVFHAPGHDQRRFLELFKRDLEPRLRKLG HCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AELKLGYKASAEQFAPRELVELAVAAEEHGMDSATVSDHFQPWRHEGGHAPFSLAWMTA CCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCCCHHHHHHHH VGERTKRLQLGTSVLTPTFRYNPAVIAQAFATMACLYPDRIFLGVGTGEALNEIATGYEG HHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCC DWPDFKERFARLRESVRLMRELWLGDRVDFDGEYYRTKGASIYDVPEGGVPVYIAAGGPV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEECCCCCEEEEEECCCCE VAKYAGRAGDGFICTSGKGEELYKDKLLPAVAEGADAAGKNVDDVDKMIEIKISYDTDPE EEHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCEEEEEEECCCCCC LALENTRFWAPLSLTAEQKHSIDDPIEMEKAADELPIEQVAKRWIVASDPDEAVEKVKDY EEECCCEEEEEEECCCHHHCCCCCCHHHHHHHHCCCHHHHHHHCEECCCHHHHHHHHHHH VGWGLNHLVFHAPGHDQRRFLELFKRDLEPRLRKLG HCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]