| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797500
Identifier: 108797500
GI number: 108797500
Start: 577484
End: 577957
Strand: Direct
Name: 108797500
Synonym: Mmcs_0520
Alternate gene names: NA
Gene position: 577484-577957 (Clockwise)
Preceding gene: 108797497
Following gene: 108797502
Centisome position: 10.12
GC content: 70.89
Gene sequence:
>474_bases GTGGCTGACGCCGACCGCGCCGCGCTCGAAGCGCTGATCGCCGCCGACGTGCGCGCGCTGTCGGCCGAGTCCGAACACAT CGGTCGCGTCTTCGCCGCGCGTCATTCCTTGTCCGCCAACGACTTCCGGGCGCTGCTGCACATCATGGTCGCCGAGACGG CCGGCCGGCCGCTGACCGCTGGCGACCTCCGCAGGCAGATGGGGATGTCCGGTGCGGCGATCACCTACCTCGTCGAACGG ATGATCACCTCCGGGCATCTGCGGCGTGACTCCGACCCCGCCGACCGACGCAAGGTGATCCTGCGGGTCGCCGAACACGG GATGGGCGTCGCCGGCCAGTTCTTCGCACCGCTCGCCGAGCACACCACCCGGGCGATGGTCGACATGCCCGACGACGACA TCGCCGTCGCGCACCGCACGCTCACCGCGCTGATCGATGCCATGGCCGCCTTCCGGCGCGACCTCGGCGACTGA
Upstream 100 bases:
>100_bases CACCACCAGCAACGCCACCACCCAGGAGAATCGACCTGCCATACCGACCACTATTCCCGATATTTCAGAAACTGAACATC TGCCGACCTATCCTCGTCGA
Downstream 100 bases:
>100_bases GGTGGGTCGGGCTATCGCCGGTTGAGCGTCGCCTCCTCGAGGTCGAGCCCGTGGAGCACCGAGCGCAGCACCTCGTCGTC GATGTGCCCGCTGTCGCGTT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR-Family Transcriptional Regulator; Regulatory Protein MarR; Regulatory Protein Marr; Marr Family Transcriptional Regulator
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MADADRAALEALIAADVRALSAESEHIGRVFAARHSLSANDFRALLHIMVAETAGRPLTAGDLRRQMGMSGAAITYLVER MITSGHLRRDSDPADRRKVILRVAEHGMGVAGQFFAPLAEHTTRAMVDMPDDDIAVAHRTLTALIDAMAAFRRDLGD
Sequences:
>Translated_157_residues MADADRAALEALIAADVRALSAESEHIGRVFAARHSLSANDFRALLHIMVAETAGRPLTAGDLRRQMGMSGAAITYLVER MITSGHLRRDSDPADRRKVILRVAEHGMGVAGQFFAPLAEHTTRAMVDMPDDDIAVAHRTLTALIDAMAAFRRDLGD >Mature_156_residues ADADRAALEALIAADVRALSAESEHIGRVFAARHSLSANDFRALLHIMVAETAGRPLTAGDLRRQMGMSGAAITYLVERM ITSGHLRRDSDPADRRKVILRVAEHGMGVAGQFFAPLAEHTTRAMVDMPDDDIAVAHRTLTALIDAMAAFRRDLGD
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17003; Mature: 16871
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADADRAALEALIAADVRALSAESEHIGRVFAARHSLSANDFRALLHIMVAETAGRPLTA CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCH GDLRRQMGMSGAAITYLVERMITSGHLRRDSDPADRRKVILRVAEHGMGVAGQFFAPLAE HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH HTTRAMVDMPDDDIAVAHRTLTALIDAMAAFRRDLGD HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADADRAALEALIAADVRALSAESEHIGRVFAARHSLSANDFRALLHIMVAETAGRPLTA CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCH GDLRRQMGMSGAAITYLVERMITSGHLRRDSDPADRRKVILRVAEHGMGVAGQFFAPLAE HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH HTTRAMVDMPDDDIAVAHRTLTALIDAMAAFRRDLGD HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA