Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

Click here to switch to the map view.

The map label for this gene is 108797497

Identifier: 108797497

GI number: 108797497

Start: 573344

End: 573988

Strand: Direct

Name: 108797497

Synonym: Mmcs_0517

Alternate gene names: NA

Gene position: 573344-573988 (Clockwise)

Preceding gene: 108797496

Following gene: 108797500

Centisome position: 10.05

GC content: 67.75

Gene sequence:

>645_bases
ATGTCGACGCCCAGGGCCGCGGCGCTGGCCGGAGTCGTCTTCGCGCTGCTGTTCGGCGCGGCGCTCATCCTGATCCGCAC
GTCGCTTCCGGAGGGCGCCGAACCCGGCTCTCAGTGGATCGACGGCGGCAGTGACCGGTTACAAGTGGCAGCGGTGCTCA
TGCCGTTCGCCGGCATCGCGTTCCTCTGGTTCATCGGCGTGATCCGCGACGGGTTCGGCCGGTACGAGGACAAGTTCTTC
GCCACGGTGTTCCTCGGCAGCGGCCTGCTGTTCCTGGCGATGATGTTCGTCGCCGCCGGGGTGGGCGCGGGCCTGGAGTC
GATGAGCGGGCACCCCGCAGAATCCGTCTCCGGTGTGGCCCTGCTGGGGCAGACGGTGCTGCTGTCGATCTCGAAGACGT
ACGCGCTGCGGATGGCCGCGGTGTTCATGATGTCCCTGGCCACGATCTGGCTGCGCACCGGCCTGATGCCCCGGCCGTTG
GTCTACGTCACCTATCTCGTGGCGGTGGCGCTGATCGTGGCGGCGGAGGTCAGCATGTGGCTCGTGTTGACCTTTCCCGC
CTGGGTGTTGGTCGTCAGCGCACTGATCTACAGCCGCGAAGTCACTCCGAGGCCACCCGCAGCGCCGTCGCCGGACACAG
CTTGA

Upstream 100 bases:

>100_bases
ACTGCTGTCAGATCACGGTTTCGCCTCGGGCGGTGATCTGGCAGCAGCCTCGGGGAGTCGGTGCGACGATGACCGCGTGG
CCGGACCTCAACCGCACCCG

Downstream 100 bases:

>100_bases
CCGCTTCGCGGGCGTGCTCGTGCTCGATCTCGGGCACCGGGTCGGCCAGCAACACGACGATGCCGTCGTCGTCCTGGTCG
AACACCTCCGGCGCGGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSTPRAAALAGVVFALLFGAALILIRTSLPEGAEPGSQWIDGGSDRLQVAAVLMPFAGIAFLWFIGVIRDGFGRYEDKFF
ATVFLGSGLLFLAMMFVAAGVGAGLESMSGHPAESVSGVALLGQTVLLSISKTYALRMAAVFMMSLATIWLRTGLMPRPL
VYVTYLVAVALIVAAEVSMWLVLTFPAWVLVVSALIYSREVTPRPPAAPSPDTA

Sequences:

>Translated_214_residues
MSTPRAAALAGVVFALLFGAALILIRTSLPEGAEPGSQWIDGGSDRLQVAAVLMPFAGIAFLWFIGVIRDGFGRYEDKFF
ATVFLGSGLLFLAMMFVAAGVGAGLESMSGHPAESVSGVALLGQTVLLSISKTYALRMAAVFMMSLATIWLRTGLMPRPL
VYVTYLVAVALIVAAEVSMWLVLTFPAWVLVVSALIYSREVTPRPPAAPSPDTA
>Mature_213_residues
STPRAAALAGVVFALLFGAALILIRTSLPEGAEPGSQWIDGGSDRLQVAAVLMPFAGIAFLWFIGVIRDGFGRYEDKFFA
TVFLGSGLLFLAMMFVAAGVGAGLESMSGHPAESVSGVALLGQTVLLSISKTYALRMAAVFMMSLATIWLRTGLMPRPLV
YVTYLVAVALIVAAEVSMWLVLTFPAWVLVVSALIYSREVTPRPPAAPSPDTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22629; Mature: 22498

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPRAAALAGVVFALLFGAALILIRTSLPEGAEPGSQWIDGGSDRLQVAAVLMPFAGIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH
FLWFIGVIRDGFGRYEDKFFATVFLGSGLLFLAMMFVAAGVGAGLESMSGHPAESVSGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHH
LLGQTVLLSISKTYALRMAAVFMMSLATIWLRTGLMPRPLVYVTYLVAVALIVAAEVSMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LVLTFPAWVLVVSALIYSREVTPRPPAAPSPDTA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STPRAAALAGVVFALLFGAALILIRTSLPEGAEPGSQWIDGGSDRLQVAAVLMPFAGIA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH
FLWFIGVIRDGFGRYEDKFFATVFLGSGLLFLAMMFVAAGVGAGLESMSGHPAESVSGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHH
LLGQTVLLSISKTYALRMAAVFMMSLATIWLRTGLMPRPLVYVTYLVAVALIVAAEVSMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LVLTFPAWVLVVSALIYSREVTPRPPAAPSPDTA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA