| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is puuP [H]
Identifier: 108797493
GI number: 108797493
Start: 569127
End: 570605
Strand: Direct
Name: puuP [H]
Synonym: Mmcs_0513
Alternate gene names: 108797493
Gene position: 569127-570605 (Clockwise)
Preceding gene: 108797492
Following gene: 108797495
Centisome position: 9.98
GC content: 67.28
Gene sequence:
>1479_bases GTGGCCGATTCCAGCGAGACACGCAGTTACGGCGACGTCGGATCCGCGCCGCACGGCGAGCTCACCCCGGAGCAGGAACG GGGTCTGCGCCGCGGCGCGATCAACTGGAGACAGGTGGCCGTCCTCTCGGTCGCCGGCTGCGGGCCCGCGTCGGTCATCG CGCTCAACCTGCAGTTCATGGGCCAGTTCGCCGGTGCCGCACTGGTTCTGGCATTCGTCCTGGTGTGGCCGGGAATCCTG TTGCTGGTCAACACGTTCGCGGAGTTCTCCAAGAGACTGCCGACCTCCGGCGGGCTCTACACATGGAACTCCAAGGCGTG GGGGCCCAATGTCGGGTTCGTCTACGGCTGGACGTTCATCGGCGCGTACCTGGTGTTCTCCGCCGCCGGGTTCGCGGTGT TCGGCGGATGGGTGCAGGAATGGCTGCAGACCCAGTTCGGCATCTCGGTGCCGTGGTGGTTGTTCACCTTCGCGGCGCTG GCCTACGTATGCGTGCTGGCCTACCTGGGAATCACCCAATCCCTGCATGCCGCACTGGGATTGCTGGCATTCGAGATCAT CGTGCTGCTGGCCCTGGCGGCGTGGATCTTCATCACCGGGCCGCAGTCCGGCAGCGGATTCGGGGTCGCGCCGTTCCAGG TGTCCTCGGCCGGGGCGCTCGCCCTCGGCGGTGTCGGGTTGGCGATGACGTACGGCGTGCTGTCACACGTGGGCATCGAG GAGGGCGCCACCCTGGGCCAGGAGGTCAAGGACCCGAAACGCCAGATCCCGCGGGGGCTCTGGGTGGCGGCCGTCGTGGT GCCGGTCTTCTACATCGTCGTCGCCTACGCGATGGTCTACGGCTACGGCATCGACGACATGACGGCGTTCGGCGAGGATC CCGCACCGCTGCAGACGATCGCCCAGACATACTGGGGGCAGGTCGGTCTCACGGTCATCGTGCTGGCCACGCTGAGCAGC ATCCTGGCGTTCAGCCAGACAGCGTTCCTGGCGGGCGCCCGCGTGCTCTACACGCTCGGCCGGGAGGGCGTGCTGCCCAC CCGCCTCGGCGCGGTGTCGCGGCGGCAGACGCCGGCGGTGGGGATCGCGGTGATGGGTGTGCTGTCGATGCTGCTCGGGG TGCCCCTGGCGTTCCTCGTCGGACCGTTCAACGTATGGGGCTACTTCGGGTTCCTCATCTCGATCGCCTTCCTGGTGTCC TACATCTTCACCAACATCGGCCTGGTGCGGTACATGCTGCGCATCGGGGTGTTCCACTGGTTCCGGCACGGCGTGCTCGG CGCCCTGGGGTCGCTGGTGTTCCTCTATCCGCTGTACAAGACCGTGTGGCCGCTGCAGACCGGCATCTACGGGGCGCTGC CGTTCGTGTACCTGGCATGGATCGTGCTGGGCATCGGGTTGCTGATCTACACGCTGCGCCGGCGTCCCGAGGTGATGTCG CGCATCGGCACCTCGCTGGCCGACGACGACGTCAGCTGA
Upstream 100 bases:
>100_bases GAAGCGCGCAGAGATCGCGGCCCAGTCGGTGGCGGTCACCGACTGGGAGGTCGCCCGGTACCTCGAGGCGATGTAACCGG TAACCCAGAAGGGAACTCCC
Downstream 100 bases:
>100_bases CCCGCAGCCAGCCCTCGGTGTGGCGGTAGAACGTCGACCGTTTCACCTCGCGGGTGCCCTCGACGCCGTCGCGGACCACC CGCGCACCCGTCGTCCCCAG
Product: amino acid permease-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MADSSETRSYGDVGSAPHGELTPEQERGLRRGAINWRQVAVLSVAGCGPASVIALNLQFMGQFAGAALVLAFVLVWPGIL LLVNTFAEFSKRLPTSGGLYTWNSKAWGPNVGFVYGWTFIGAYLVFSAAGFAVFGGWVQEWLQTQFGISVPWWLFTFAAL AYVCVLAYLGITQSLHAALGLLAFEIIVLLALAAWIFITGPQSGSGFGVAPFQVSSAGALALGGVGLAMTYGVLSHVGIE EGATLGQEVKDPKRQIPRGLWVAAVVVPVFYIVVAYAMVYGYGIDDMTAFGEDPAPLQTIAQTYWGQVGLTVIVLATLSS ILAFSQTAFLAGARVLYTLGREGVLPTRLGAVSRRQTPAVGIAVMGVLSMLLGVPLAFLVGPFNVWGYFGFLISIAFLVS YIFTNIGLVRYMLRIGVFHWFRHGVLGALGSLVFLYPLYKTVWPLQTGIYGALPFVYLAWIVLGIGLLIYTLRRRPEVMS RIGTSLADDDVS
Sequences:
>Translated_492_residues MADSSETRSYGDVGSAPHGELTPEQERGLRRGAINWRQVAVLSVAGCGPASVIALNLQFMGQFAGAALVLAFVLVWPGIL LLVNTFAEFSKRLPTSGGLYTWNSKAWGPNVGFVYGWTFIGAYLVFSAAGFAVFGGWVQEWLQTQFGISVPWWLFTFAAL AYVCVLAYLGITQSLHAALGLLAFEIIVLLALAAWIFITGPQSGSGFGVAPFQVSSAGALALGGVGLAMTYGVLSHVGIE EGATLGQEVKDPKRQIPRGLWVAAVVVPVFYIVVAYAMVYGYGIDDMTAFGEDPAPLQTIAQTYWGQVGLTVIVLATLSS ILAFSQTAFLAGARVLYTLGREGVLPTRLGAVSRRQTPAVGIAVMGVLSMLLGVPLAFLVGPFNVWGYFGFLISIAFLVS YIFTNIGLVRYMLRIGVFHWFRHGVLGALGSLVFLYPLYKTVWPLQTGIYGALPFVYLAWIVLGIGLLIYTLRRRPEVMS RIGTSLADDDVS >Mature_491_residues ADSSETRSYGDVGSAPHGELTPEQERGLRRGAINWRQVAVLSVAGCGPASVIALNLQFMGQFAGAALVLAFVLVWPGILL LVNTFAEFSKRLPTSGGLYTWNSKAWGPNVGFVYGWTFIGAYLVFSAAGFAVFGGWVQEWLQTQFGISVPWWLFTFAALA YVCVLAYLGITQSLHAALGLLAFEIIVLLALAAWIFITGPQSGSGFGVAPFQVSSAGALALGGVGLAMTYGVLSHVGIEE GATLGQEVKDPKRQIPRGLWVAAVVVPVFYIVVAYAMVYGYGIDDMTAFGEDPAPLQTIAQTYWGQVGLTVIVLATLSSI LAFSQTAFLAGARVLYTLGREGVLPTRLGAVSRRQTPAVGIAVMGVLSMLLGVPLAFLVGPFNVWGYFGFLISIAFLVSY IFTNIGLVRYMLRIGVFHWFRHGVLGALGSLVFLYPLYKTVWPLQTGIYGALPFVYLAWIVLGIGLLIYTLRRRPEVMSR IGTSLADDDVS
Specific function: Imports putrescine [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI187423910, Length=338, Percent_Identity=26.3313609467456, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI7657591, Length=338, Percent_Identity=26.3313609467456, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI258645169, Length=353, Percent_Identity=24.0793201133144, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI87081869, Length=355, Percent_Identity=23.6619718309859, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI87082023, Length=361, Percent_Identity=22.4376731301939, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786789, Length=409, Percent_Identity=23.2273838630807, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1786302, Length=407, Percent_Identity=21.8673218673219, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789017, Length=404, Percent_Identity=24.5049504950495, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1786602, Length=382, Percent_Identity=22.7748691099476, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI24667468, Length=371, Percent_Identity=23.7196765498652, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 52873; Mature: 52741
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSSETRSYGDVGSAPHGELTPEQERGLRRGAINWRQVAVLSVAGCGPASVIALNLQFM CCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCHHHHHHHEECCCCCHHHHHHHHHHH GQFAGAALVLAFVLVWPGILLLVNTFAEFSKRLPTSGGLYTWNSKAWGPNVGFVYGWTFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHH GAYLVFSAAGFAVFGGWVQEWLQTQFGISVPWWLFTFAALAYVCVLAYLGITQSLHAALG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAFEIIVLLALAAWIFITGPQSGSGFGVAPFQVSSAGALALGGVGLAMTYGVLSHVGIE HHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCC EGATLGQEVKDPKRQIPRGLWVAAVVVPVFYIVVAYAMVYGYGIDDMTAFGEDPAPLQTI CCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHH AQTYWGQVGLTVIVLATLSSILAFSQTAFLAGARVLYTLGREGVLPTRLGAVSRRQTPAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHH GIAVMGVLSMLLGVPLAFLVGPFNVWGYFGFLISIAFLVSYIFTNIGLVRYMLRIGVFHW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRHGVLGALGSLVFLYPLYKTVWPLQTGIYGALPFVYLAWIVLGIGLLIYTLRRRPEVMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RIGTSLADDDVS HHCCCCCCCCCC >Mature Secondary Structure ADSSETRSYGDVGSAPHGELTPEQERGLRRGAINWRQVAVLSVAGCGPASVIALNLQFM CCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCHHHHHHHEECCCCCHHHHHHHHHHH GQFAGAALVLAFVLVWPGILLLVNTFAEFSKRLPTSGGLYTWNSKAWGPNVGFVYGWTFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHH GAYLVFSAAGFAVFGGWVQEWLQTQFGISVPWWLFTFAALAYVCVLAYLGITQSLHAALG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAFEIIVLLALAAWIFITGPQSGSGFGVAPFQVSSAGALALGGVGLAMTYGVLSHVGIE HHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCC EGATLGQEVKDPKRQIPRGLWVAAVVVPVFYIVVAYAMVYGYGIDDMTAFGEDPAPLQTI CCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHH AQTYWGQVGLTVIVLATLSSILAFSQTAFLAGARVLYTLGREGVLPTRLGAVSRRQTPAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHH GIAVMGVLSMLLGVPLAFLVGPFNVWGYFGFLISIAFLVSYIFTNIGLVRYMLRIGVFHW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRHGVLGALGSLVFLYPLYKTVWPLQTGIYGALPFVYLAWIVLGIGLLIYTLRRRPEVMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RIGTSLADDDVS HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]