| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yhhW [C]
Identifier: 108797115
GI number: 108797115
Start: 153034
End: 153798
Strand: Reverse
Name: yhhW [C]
Synonym: Mmcs_0135
Alternate gene names: 108797115
Gene position: 153798-153034 (Counterclockwise)
Preceding gene: 108797117
Following gene: 108797114
Centisome position: 2.7
GC content: 66.27
Gene sequence:
>765_bases ATGACGACTGCTGAACGCATCGACGTCCGGCGCGCCGGCGAGCGCCCCAGGACGCGGATCTCCTGGCTGGACTCCAAACA CTCGTTCTCGTTCGCCGACCACTACGACCCCGCCAACACCCACCACGGCCTGCTGCTGGTCAACAACGACGACACCGTCA CCCCCGGTAGCGGCTTCGAGACTCACCCCCACCGCGACATGGAGATCGTCACATGGGTGTTGCGCGGATCGCTCGTCCAC CAGGACTCGACGGGCAATTCGGGTGTGATCTATCCCGGTCTGGCGCAACGGATGTCGGCCGGCAGGGGCATTCTGCACTC GGAGAAGAACGACTCCTGGACCCTGACCGGCGAGGCGAGCCACCGCGAGCCCGTCCACTTCGTGCAGATGTGGGTGGTAC CCGACGAATCCGGTATCGCCCCGGGCTATCAGCAACTCGAGATCGACGACGAGCAGTTGCGCGGGAAGTTCGTGACGATC GCCTCGGGCATGCCCGAGCACCGCGACGACACCGCGATCACGATCCGCAATCGGTACGCGGCGCTGCACGGCGCCCGCCT CGAACCCGGCGACAACGTCGAACTGCCCCAGGCGCCGTATCTGCACCTGTTCGTCCCGCGCGGTGAGGTGACGCTCGAGG GTGCCGGTGCGCTGACAGAAGGCGATGCGGTGCGCTTCACGGCGTCCGGCGGCCAGCGCGTGACGGCCGTCGAACCGGCC GAGATCCTGGTCTGGGAAATGCATGCGAATCTGTCTGCCGTATAA
Upstream 100 bases:
>100_bases CCTCGTCGGACAACCACACGGAATACATGACACATCATGTGAGTTGTCGTGTCCAGATGCGCCACCTAGGCTGGCGCACG GTTTCGAGGAGACGAGTGAC
Downstream 100 bases:
>100_bases GGCATTCGGCGTTCTCGCCGTTGCGGCGCTGGCCGGGTGCTCGACGAGTGCACCCGACGAGACCGCGCCGTCGCCGTCCA CCTCGACGTCGGCACCTGCG
Product: Pirin-like protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein Rv0181c/MT0190 [H]
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTTAERIDVRRAGERPRTRISWLDSKHSFSFADHYDPANTHHGLLLVNNDDTVTPGSGFETHPHRDMEIVTWVLRGSLVH QDSTGNSGVIYPGLAQRMSAGRGILHSEKNDSWTLTGEASHREPVHFVQMWVVPDESGIAPGYQQLEIDDEQLRGKFVTI ASGMPEHRDDTAITIRNRYAALHGARLEPGDNVELPQAPYLHLFVPRGEVTLEGAGALTEGDAVRFTASGGQRVTAVEPA EILVWEMHANLSAV
Sequences:
>Translated_254_residues MTTAERIDVRRAGERPRTRISWLDSKHSFSFADHYDPANTHHGLLLVNNDDTVTPGSGFETHPHRDMEIVTWVLRGSLVH QDSTGNSGVIYPGLAQRMSAGRGILHSEKNDSWTLTGEASHREPVHFVQMWVVPDESGIAPGYQQLEIDDEQLRGKFVTI ASGMPEHRDDTAITIRNRYAALHGARLEPGDNVELPQAPYLHLFVPRGEVTLEGAGALTEGDAVRFTASGGQRVTAVEPA EILVWEMHANLSAV >Mature_253_residues TTAERIDVRRAGERPRTRISWLDSKHSFSFADHYDPANTHHGLLLVNNDDTVTPGSGFETHPHRDMEIVTWVLRGSLVHQ DSTGNSGVIYPGLAQRMSAGRGILHSEKNDSWTLTGEASHREPVHFVQMWVVPDESGIAPGYQQLEIDDEQLRGKFVTIA SGMPEHRDDTAITIRNRYAALHGARLEPGDNVELPQAPYLHLFVPRGEVTLEGAGALTEGDAVRFTASGGQRVTAVEPAE ILVWEMHANLSAV
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=126, Percent_Identity=38.8888888888889, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI4505823, Length=126, Percent_Identity=38.8888888888889, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1789847, Length=242, Percent_Identity=36.3636363636364, Blast_Score=136, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 28027; Mature: 27895
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAERIDVRRAGERPRTRISWLDSKHSFSFADHYDPANTHHGLLLVNNDDTVTPGSGFE CCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCC THPHRDMEIVTWVLRGSLVHQDSTGNSGVIYPGLAQRMSAGRGILHSEKNDSWTLTGEAS CCCCCCHHHEEEEHHCCEEECCCCCCCCEECCCHHHHHHCCCCCEECCCCCCEEEECCCC HREPVHFVQMWVVPDESGIAPGYQQLEIDDEQLRGKFVTIASGMPEHRDDTAITIRNRYA CCCCEEEEEEEEEECCCCCCCCCEEEECCHHHHCCEEEEEECCCCCCCCCCEEEEECCEE ALHGARLEPGDNVELPQAPYLHLFVPRGEVTLEGAGALTEGDAVRFTASGGQRVTAVEPA EEECCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCEECCCEEEEECCCCCEEEEECCC EILVWEMHANLSAV EEEEEEECCCCCCC >Mature Secondary Structure TTAERIDVRRAGERPRTRISWLDSKHSFSFADHYDPANTHHGLLLVNNDDTVTPGSGFE CCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCC THPHRDMEIVTWVLRGSLVHQDSTGNSGVIYPGLAQRMSAGRGILHSEKNDSWTLTGEAS CCCCCCHHHEEEEHHCCEEECCCCCCCCEECCCHHHHHHCCCCCEECCCCCCEEEECCCC HREPVHFVQMWVVPDESGIAPGYQQLEIDDEQLRGKFVTIASGMPEHRDDTAITIRNRYA CCCCEEEEEEEEEECCCCCCCCCEEEECCHHHHCCEEEEEECCCCCCCCCCEEEEECCEE ALHGARLEPGDNVELPQAPYLHLFVPRGEVTLEGAGALTEGDAVRFTASGGQRVTAVEPA EEECCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCEECCCEEEEECCCCCEEEEECCC EILVWEMHANLSAV EEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]