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The map label for this gene is 108796986

Identifier: 108796986

GI number: 108796986

Start: 5380

End: 5952

Strand: Direct

Name: 108796986

Synonym: Mmcs_0005

Alternate gene names: NA

Gene position: 5380-5952 (Clockwise)

Preceding gene: 108796985

Following gene: 108796987

Centisome position: 0.09

GC content: 72.08

Gene sequence:

>573_bases
ATGAGCGACGACGACCGGGATGGCGACGGCGACCCGATCGGTCCCCCGGCGCACCTGTCCGAGCTCAAGGGAATGGATCT
GGTGCGGCGCACCCTCGAAGAAGCCCGCGGGGCGGCGCGCAGCCAGGGTAAGGACGTGGGCCGGGGTCGGACCTCGCCGG
CCCGCCGGGTGGCGGGTACGGGACGGCGCCGCAGCTGGTCGGGACCGGGTCCGGATTCCCGCGACCCCCAGACACTCGGT
GCGGCGACGCGGGATCTGGCCCGTACCCGGGGCTGGTCACCCAAGGTCGCCGAGGGTGCGGTGTTCGGACAGTGGTCGAC
GGTGGTCGGCGAACAGATCGCCGAACACGCCACCCCGAGTTCGTTGCGCGAGGGCGTCCTGACGGTCGCCGCCGAATCGA
CCGCCTGGGCCACCCAACTCCGGATGGTGCAGTCGCAGCTTCTGGCGAAGATCGCCGCGGCGGTCGGCGACGGTGTGGTC
ACGTCGCTGAAGATCACCGGACCGACGGCGCCGTCGTGGCGGAAAGGCCGTTACCACATCGCGGGCCGCGGCCCGCGCGA
TACGTACGGATGA

Upstream 100 bases:

>100_bases
CCGCGGCGGTCGCCGAGGACATCCCCGCCGACTGGGATGCGCGGCGGATCATGATCCGGATGCAGGACGACGACGATGGG
CGCGTATCGATGGTGGAGTC

Downstream 100 bases:

>100_bases
GTCCTCACAACTGTGCGCTCAGAGGCGCGTGGGGTTCCCGGGGCCGTCCCTTCGGCGTCCCGACGCACCGAAGTTCGAGA
AATTCCGCGCACGGCGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSDDDRDGDGDPIGPPAHLSELKGMDLVRRTLEEARGAARSQGKDVGRGRTSPARRVAGTGRRRSWSGPGPDSRDPQTLG
AATRDLARTRGWSPKVAEGAVFGQWSTVVGEQIAEHATPSSLREGVLTVAAESTAWATQLRMVQSQLLAKIAAAVGDGVV
TSLKITGPTAPSWRKGRYHIAGRGPRDTYG

Sequences:

>Translated_190_residues
MSDDDRDGDGDPIGPPAHLSELKGMDLVRRTLEEARGAARSQGKDVGRGRTSPARRVAGTGRRRSWSGPGPDSRDPQTLG
AATRDLARTRGWSPKVAEGAVFGQWSTVVGEQIAEHATPSSLREGVLTVAAESTAWATQLRMVQSQLLAKIAAAVGDGVV
TSLKITGPTAPSWRKGRYHIAGRGPRDTYG
>Mature_189_residues
SDDDRDGDGDPIGPPAHLSELKGMDLVRRTLEEARGAARSQGKDVGRGRTSPARRVAGTGRRRSWSGPGPDSRDPQTLGA
ATRDLARTRGWSPKVAEGAVFGQWSTVVGEQIAEHATPSSLREGVLTVAAESTAWATQLRMVQSQLLAKIAAAVGDGVVT
SLKITGPTAPSWRKGRYHIAGRGPRDTYG

Specific function: Unknown

COG id: COG5512

COG function: function code R; Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0232 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007922
- InterPro:   IPR023007 [H]

Pfam domain/function: PF05258 DUF721 [H]

EC number: NA

Molecular weight: Translated: 20121; Mature: 19989

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDDRDGDGDPIGPPAHLSELKGMDLVRRTLEEARGAARSQGKDVGRGRTSPARRVAGT
CCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC
GRRRSWSGPGPDSRDPQTLGAATRDLARTRGWSPKVAEGAVFGQWSTVVGEQIAEHATPS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHHHHHCCHH
SLREGVLTVAAESTAWATQLRMVQSQLLAKIAAAVGDGVVTSLKITGPTAPSWRKGRYHI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEE
AGRGPRDTYG
CCCCCCCCCC
>Mature Secondary Structure 
SDDDRDGDGDPIGPPAHLSELKGMDLVRRTLEEARGAARSQGKDVGRGRTSPARRVAGT
CCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC
GRRRSWSGPGPDSRDPQTLGAATRDLARTRGWSPKVAEGAVFGQWSTVVGEQIAEHATPS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHHHHHCCHH
SLREGVLTVAAESTAWATQLRMVQSQLLAKIAAAVGDGVVTSLKITGPTAPSWRKGRYHI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEE
AGRGPRDTYG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8878580 [H]