| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108764076
Identifier: 108764076
GI number: 108764076
Start: 301574
End: 302950
Strand: Direct
Name: 108764076
Synonym: MXAN_0254
Alternate gene names: NA
Gene position: 301574-302950 (Clockwise)
Preceding gene: 108759907
Following gene: 108756884
Centisome position: 3.3
GC content: 69.86
Gene sequence:
>1377_bases ATGAGCTCATCCGCCGTCTCTACTCCTGTGGCTTCCGCGCCCGCGCGCCCCACCTCTCGCATCTGGGCGGGGCGGGTGCT GCTCTTCGTGGGCTTCTTCGCGGCGCTGGCGGCGTTCCCCGTCTACACGCCCTTCGACTCCAAGCTGACGCTCCCCACCA CGCTGTCTCTGTTGCGTGAAGGGAACCTCGACCTGGACGAATACGCCCCCACCTTCGAGTCGTACCGTCACGGCCTCTAC GAGCGTGACGGCCACCTCTACAACTACTTCCCCCTGGGCCCTTCCCTGGCCGCCGTGCCCATGGTGGTGCTGGTGGATGG CTTCGTGCGCCTCGCCACGCCCGTGGGCAAGCTGCACCCGGCCCTGGCGAAGCCCCTGGCGCACTGGCGTCACATCTACG ACGCCACCGGCGGCGTGGACCTGGACGCGTGGAACGGCCCTCAGCGCCTCTTCGCCTCCGCGCTGACCGCGCTCGCTGGC GTCGTCATGTTCATGCTGGGCACCGCGCTGCACCTGTCCCGCCAGCGCGCGCTGCTGCTCGCCGCCGTCTTCGTCTTCTG CACGCCGCTGCTCTCCACCGCCAGCCGCGCCCTGTGGCAGCACGGCCCTTCGCTGCTGTTCCTGACCCTGGTGCTCCTCT GCCTCGTCCGCGCGCGCGAGGCTCCGCGTCACGTGGCCTGGGCGGGCATTCCCCTGGCGCTCGCCTACGTCATGCGGCCC ACCAACAGCCTCTCCGTGCTGGTGCTGTCGCTCTACGTGCTGTGGACCTGGCCGCGTCAGGCCTGGAAGTTCTTCGCGGG CGCGCTCGCAGTGGCCATCCCGTGGGTGGCGGTGAACCTCATCCACTACGGCTCCGTGCTGGCGCCTTATTACGAACCGC AGCGCCTGGAGCTGTCCGCCTCTCGCGTGGCCGAGGCCCTTGCCGGAAACCTCGTGTCCCCCGCGCGGGGGCTGCTCGTG TTCACCCCCGTGCTCCTGATGAGTGCCTGGGGCCTGTGGATGGACCTGCGCGCCCGGACCTTCACCCGGCTGCATGCGGT GCTGGTCGCGGTGGTCGCGCTGCACTGGGCCGCCATCTCCACCTTCCCGCACTGGTGGGCGGGGCACTCGTATGGCCCGC GCTTCTTCTCGGACATGGTGCCCTACCTCGTCTTCTTCCTCGTCCCCGTGGTGCGCGCGCTCCAATGGAAAGGCCCCGAG GCCCGGCGCGGCTTGACGGCCACCTTCGCGGTGCTGGCCGTGCTGAGCCTGGTCCTCCATGTCCACGGCGCCAGCTCGCG CGCGGTGTACCGGTGGAACAGCTTGCCGCTCGACGTGGATGAACACCCGGAGCGGCTCTGGGATTGGTCCGACCCGCAGT TCCTCGGACGGCGCTGA
Upstream 100 bases:
>100_bases TCTGGCATTGCTCCTGCTCCTGGCTTTCGTGCTTCCGAGCCACTAAGACGGCGGCCCTCCAACGCGTCGCTGCCGGAGCG CGCGAGGTTGGTCCGCCGCG
Downstream 100 bases:
>100_bases GCCATCCGCCGCGTGCGTGCCGCGCCAGCGCGCGCGTCAGGTGCCTCGCCACGTCCGTGCCGCCGCGCGCGTCGAAGCCC AGGAACATCGCCGAGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MSSSAVSTPVASAPARPTSRIWAGRVLLFVGFFAALAAFPVYTPFDSKLTLPTTLSLLREGNLDLDEYAPTFESYRHGLY ERDGHLYNYFPLGPSLAAVPMVVLVDGFVRLATPVGKLHPALAKPLAHWRHIYDATGGVDLDAWNGPQRLFASALTALAG VVMFMLGTALHLSRQRALLLAAVFVFCTPLLSTASRALWQHGPSLLFLTLVLLCLVRAREAPRHVAWAGIPLALAYVMRP TNSLSVLVLSLYVLWTWPRQAWKFFAGALAVAIPWVAVNLIHYGSVLAPYYEPQRLELSASRVAEALAGNLVSPARGLLV FTPVLLMSAWGLWMDLRARTFTRLHAVLVAVVALHWAAISTFPHWWAGHSYGPRFFSDMVPYLVFFLVPVVRALQWKGPE ARRGLTATFAVLAVLSLVLHVHGASSRAVYRWNSLPLDVDEHPERLWDWSDPQFLGRR
Sequences:
>Translated_458_residues MSSSAVSTPVASAPARPTSRIWAGRVLLFVGFFAALAAFPVYTPFDSKLTLPTTLSLLREGNLDLDEYAPTFESYRHGLY ERDGHLYNYFPLGPSLAAVPMVVLVDGFVRLATPVGKLHPALAKPLAHWRHIYDATGGVDLDAWNGPQRLFASALTALAG VVMFMLGTALHLSRQRALLLAAVFVFCTPLLSTASRALWQHGPSLLFLTLVLLCLVRAREAPRHVAWAGIPLALAYVMRP TNSLSVLVLSLYVLWTWPRQAWKFFAGALAVAIPWVAVNLIHYGSVLAPYYEPQRLELSASRVAEALAGNLVSPARGLLV FTPVLLMSAWGLWMDLRARTFTRLHAVLVAVVALHWAAISTFPHWWAGHSYGPRFFSDMVPYLVFFLVPVVRALQWKGPE ARRGLTATFAVLAVLSLVLHVHGASSRAVYRWNSLPLDVDEHPERLWDWSDPQFLGRR >Mature_457_residues SSSAVSTPVASAPARPTSRIWAGRVLLFVGFFAALAAFPVYTPFDSKLTLPTTLSLLREGNLDLDEYAPTFESYRHGLYE RDGHLYNYFPLGPSLAAVPMVVLVDGFVRLATPVGKLHPALAKPLAHWRHIYDATGGVDLDAWNGPQRLFASALTALAGV VMFMLGTALHLSRQRALLLAAVFVFCTPLLSTASRALWQHGPSLLFLTLVLLCLVRAREAPRHVAWAGIPLALAYVMRPT NSLSVLVLSLYVLWTWPRQAWKFFAGALAVAIPWVAVNLIHYGSVLAPYYEPQRLELSASRVAEALAGNLVSPARGLLVF TPVLLMSAWGLWMDLRARTFTRLHAVLVAVVALHWAAISTFPHWWAGHSYGPRFFSDMVPYLVFFLVPVVRALQWKGPEA RRGLTATFAVLAVLSLVLHVHGASSRAVYRWNSLPLDVDEHPERLWDWSDPQFLGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50727; Mature: 50596
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSAVSTPVASAPARPTSRIWAGRVLLFVGFFAALAAFPVYTPFDSKLTLPTTLSLLRE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC GNLDLDEYAPTFESYRHGLYERDGHLYNYFPLGPSLAAVPMVVLVDGFVRLATPVGKLHP CCCCHHHHCCCHHHHHCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHH ALAKPLAHWRHIYDATGGVDLDAWNGPQRLFASALTALAGVVMFMLGTALHLSRQRALLL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVFVFCTPLLSTASRALWQHGPSLLFLTLVLLCLVRAREAPRHVAWAGIPLALAYVMRP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC TNSLSVLVLSLYVLWTWPRQAWKFFAGALAVAIPWVAVNLIHYGSVLAPYYEPQRLELSA CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH SRVAEALAGNLVSPARGLLVFTPVLLMSAWGLWMDLRARTFTRLHAVLVAVVALHWAAIS HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFPHWWAGHSYGPRFFSDMVPYLVFFLVPVVRALQWKGPEARRGLTATFAVLAVLSLVLH CCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH VHGASSRAVYRWNSLPLDVDEHPERLWDWSDPQFLGRR HCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCHHCCCC >Mature Secondary Structure SSSAVSTPVASAPARPTSRIWAGRVLLFVGFFAALAAFPVYTPFDSKLTLPTTLSLLRE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC GNLDLDEYAPTFESYRHGLYERDGHLYNYFPLGPSLAAVPMVVLVDGFVRLATPVGKLHP CCCCHHHHCCCHHHHHCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHH ALAKPLAHWRHIYDATGGVDLDAWNGPQRLFASALTALAGVVMFMLGTALHLSRQRALLL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVFVFCTPLLSTASRALWQHGPSLLFLTLVLLCLVRAREAPRHVAWAGIPLALAYVMRP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC TNSLSVLVLSLYVLWTWPRQAWKFFAGALAVAIPWVAVNLIHYGSVLAPYYEPQRLELSA CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH SRVAEALAGNLVSPARGLLVFTPVLLMSAWGLWMDLRARTFTRLHAVLVAVVALHWAAIS HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFPHWWAGHSYGPRFFSDMVPYLVFFLVPVVRALQWKGPEARRGLTATFAVLAVLSLVLH CCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH VHGASSRAVYRWNSLPLDVDEHPERLWDWSDPQFLGRR HCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA