| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is yyaJ [H]
Identifier: 108763885
GI number: 108763885
Start: 4661468
End: 4662733
Strand: Direct
Name: yyaJ [H]
Synonym: MXAN_3880
Alternate gene names: 108763885
Gene position: 4661468-4662733 (Clockwise)
Preceding gene: 108758219
Following gene: 108757385
Centisome position: 51.0
GC content: 67.22
Gene sequence:
>1266_bases ATGAAATTCCTGAGAGAGCTCCGCTCGGTCCTCAACCTGACCGTGCTGGTGGCCGGGCTCGGCTACTTCGTCGACCTCTT CGACATCACGCTGTTCGGCGTGGTGCGTGTCGCATCGCTCAAGGACATCGGCGTCACCGACCCGGCCGACATCCTCCAGA GCGGCCTGCTCATCTACAACGCGCAGATGGTGGGCATGATGGTGGGCGGCCTGCTGTGGGGCGTGCTCGCCGACAAGCGC GGACGCCTGTCGGTGATGTTCGGCTCCATCCTGCTCTACTCCTTCGCGAACCTGGCCAACGCCTTCGCCTGGGACGTCAC CAGCTACGCCGTTCTCCGCTTCCTCGGAGGCGTGGGGCTCGCGGGTGAGCTGGGCGCGGCCATTACCCTGGTGGCGGAGT CCCTGCCCAAGGAGAAGCGCGGCCTGGGGACCACCATCGTCGCCACGCTGGGCATGCTCGGCATCGTCGCCGCGGCCTTC CTGGGCCAGCACATGCACTGGAAGACGGCCTACCTCACCGGCGGCTTCATGGGCCTCGCGCTGCTCTTCGCGCGCTTCAA GGTGTCGGAGTCGGAGCTGTTCAGCAAGAAGATGGACCCCGCGCGCGCCAACCCGCTGCTGCTCCTCACCGGCGGCCGGT TCATCAAGTACATCTGCTGCATCCTCATCGGCGTGCCCATCTACTTCACCACGGGCATCCTCTTCACCTTCGCGCCCGAG CTGACGGCCGGCCTCAACGTCCAGGGCACCGTGACGGCCGGCAACGCCATCCTCTATGGCTCCATCGGCCTGACGCTGGG TGACTTGCTGGCGGGCGTCTTCAGCCAGTGGCTCAAGAGCCGCAAGCGCGCGGTGGCGATGAACCTCACCGCGGGCTTCG TGCTGATGCTCGTCTACGGCCTCACCCCGGGCCTCACCAGCACCATGGTGTACGGGCTGAGCTTCCTGATTGGCATCACC GTGGGCTACTGGGCCGTGCTGGTGACCATGGCCGCCGAGCAGTTCGGCACCAACATCCGCGGCACCGTGGCCACCACCGT CCCCAACTTCGTGCGTGGCTCGGCGGCGCTCGCGGCCAGCGGCTTCGCCTACCTGAAGGGCGAGATGTCGGTGTCCACCG CGGCGCTCATCGTCGGTAGCATCTGCTTCGGCCTGGCGCTGCTGGCCCTCACCCGGCTGGAAGAGACGTTCCACCGGGAC CTGGATTACGAAGAGACGGCGAACGGCCCGCAGCCGGCCGCCCAGCCCTCCCAGTCCGGCACCTGA
Upstream 100 bases:
>100_bases GGCCATGGCCTGAAGGTGAATTCAGGTTCATGCAGTGCGTCATGCATGCCCCTGCGCGGGGCGCTTGCTCCTCGCGCGCC AAAGTCCGTTAATCGGGCGT
Downstream 100 bases:
>100_bases CGCACGGCGCGGCGCTCACGGGGCGCCGCGCTTTGAATCGGACGTTCGCCCCGGCAGCCGTTGCTCCGGGGCCGACGGGA TGCATACAGCGCGCACATGG
Product: major facilitator family transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MKFLRELRSVLNLTVLVAGLGYFVDLFDITLFGVVRVASLKDIGVTDPADILQSGLLIYNAQMVGMMVGGLLWGVLADKR GRLSVMFGSILLYSFANLANAFAWDVTSYAVLRFLGGVGLAGELGAAITLVAESLPKEKRGLGTTIVATLGMLGIVAAAF LGQHMHWKTAYLTGGFMGLALLFARFKVSESELFSKKMDPARANPLLLLTGGRFIKYICCILIGVPIYFTTGILFTFAPE LTAGLNVQGTVTAGNAILYGSIGLTLGDLLAGVFSQWLKSRKRAVAMNLTAGFVLMLVYGLTPGLTSTMVYGLSFLIGIT VGYWAVLVTMAAEQFGTNIRGTVATTVPNFVRGSAALAASGFAYLKGEMSVSTAALIVGSICFGLALLALTRLEETFHRD LDYEETANGPQPAAQPSQSGT
Sequences:
>Translated_421_residues MKFLRELRSVLNLTVLVAGLGYFVDLFDITLFGVVRVASLKDIGVTDPADILQSGLLIYNAQMVGMMVGGLLWGVLADKR GRLSVMFGSILLYSFANLANAFAWDVTSYAVLRFLGGVGLAGELGAAITLVAESLPKEKRGLGTTIVATLGMLGIVAAAF LGQHMHWKTAYLTGGFMGLALLFARFKVSESELFSKKMDPARANPLLLLTGGRFIKYICCILIGVPIYFTTGILFTFAPE LTAGLNVQGTVTAGNAILYGSIGLTLGDLLAGVFSQWLKSRKRAVAMNLTAGFVLMLVYGLTPGLTSTMVYGLSFLIGIT VGYWAVLVTMAAEQFGTNIRGTVATTVPNFVRGSAALAASGFAYLKGEMSVSTAALIVGSICFGLALLALTRLEETFHRD LDYEETANGPQPAAQPSQSGT >Mature_421_residues MKFLRELRSVLNLTVLVAGLGYFVDLFDITLFGVVRVASLKDIGVTDPADILQSGLLIYNAQMVGMMVGGLLWGVLADKR GRLSVMFGSILLYSFANLANAFAWDVTSYAVLRFLGGVGLAGELGAAITLVAESLPKEKRGLGTTIVATLGMLGIVAAAF LGQHMHWKTAYLTGGFMGLALLFARFKVSESELFSKKMDPARANPLLLLTGGRFIKYICCILIGVPIYFTTGILFTFAPE LTAGLNVQGTVTAGNAILYGSIGLTLGDLLAGVFSQWLKSRKRAVAMNLTAGFVLMLVYGLTPGLTSTMVYGLSFLIGIT VGYWAVLVTMAAEQFGTNIRGTVATTVPNFVRGSAALAASGFAYLKGEMSVSTAALIVGSICFGLALLALTRLEETFHRD LDYEETANGPQPAAQPSQSGT
Specific function: Could Be A Transporter For 3-Phenylpropionate (Hydrocinnamic Acid). [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI87081723, Length=170, Percent_Identity=32.9411764705882, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI87082231, Length=248, Percent_Identity=28.2258064516129, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082404, Length=179, Percent_Identity=29.608938547486, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 44628; Mature: 44628
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLRELRSVLNLTVLVAGLGYFVDLFDITLFGVVRVASLKDIGVTDPADILQSGLLIYN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHH AQMVGMMVGGLLWGVLADKRGRLSVMFGSILLYSFANLANAFAWDVTSYAVLRFLGGVGL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGELGAAITLVAESLPKEKRGLGTTIVATLGMLGIVAAAFLGQHMHWKTAYLTGGFMGLA CHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LLFARFKVSESELFSKKMDPARANPLLLLTGGRFIKYICCILIGVPIYFTTGILFTFAPE HHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHH LTAGLNVQGTVTAGNAILYGSIGLTLGDLLAGVFSQWLKSRKRAVAMNLTAGFVLMLVYG HHCCCCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHH LTPGLTSTMVYGLSFLIGITVGYWAVLVTMAAEQFGTNIRGTVATTVPNFVRGSAALAAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHCCCHHHHHC GFAYLKGEMSVSTAALIVGSICFGLALLALTRLEETFHRDLDYEETANGPQPAAQPSQSG CHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCC T C >Mature Secondary Structure MKFLRELRSVLNLTVLVAGLGYFVDLFDITLFGVVRVASLKDIGVTDPADILQSGLLIYN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHH AQMVGMMVGGLLWGVLADKRGRLSVMFGSILLYSFANLANAFAWDVTSYAVLRFLGGVGL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGELGAAITLVAESLPKEKRGLGTTIVATLGMLGIVAAAFLGQHMHWKTAYLTGGFMGLA CHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LLFARFKVSESELFSKKMDPARANPLLLLTGGRFIKYICCILIGVPIYFTTGILFTFAPE HHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHH LTAGLNVQGTVTAGNAILYGSIGLTLGDLLAGVFSQWLKSRKRAVAMNLTAGFVLMLVYG HHCCCCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHH LTPGLTSTMVYGLSFLIGITVGYWAVLVTMAAEQFGTNIRGTVATTVPNFVRGSAALAAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHCCCHHHHHC GFAYLKGEMSVSTAALIVGSICFGLALLALTRLEETFHRDLDYEETANGPQPAAQPSQSG CHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 8011666; 9384377 [H]