| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is purN [H]
Identifier: 108763836
GI number: 108763836
Start: 3151150
End: 3151824
Strand: Reverse
Name: purN [H]
Synonym: MXAN_2700
Alternate gene names: 108763836
Gene position: 3151824-3151150 (Counterclockwise)
Preceding gene: 108763087
Following gene: 108760414
Centisome position: 34.48
GC content: 71.85
Gene sequence:
>675_bases ATGAGCGGCCAGCGAGTCCGCCTGGGCGTGCTCGTGTCCGGCAGCGGGAGCAACCTCCAGGCGCTGCTGGACGCCTGTGC GCGGGAGGACTTTCCCGCCGAGGTGGCCTGCGTGGTGTCCAACGTCTCCACCGCGTTCGCGCTGGAGCGGGCGCGCAAGG CGGGCGTGACGGCCAAGGTGGTGGACCACAAGGCCCACGCGACGAAGGAGGGCTTCGAGAAGGCCCTGCTGGACACGCTG CGCGCGGCGAACGTGGAGTGGGTGTGCCTTGCGGGGTTCATGCGCTTGTTGAGCGCGGACTTCCTGGGCCACTACGCGGG GCGGGTGCTGAACATCCACCCGTCGCTGCTGCCCGCCTTCCCGGGCCTGCATGCGCAGCGACAGGCGCTGGAGCGAGGCG TGAAAGTGGCCGGGTGCACGGTGCACTTCGTGGACGCGGGCACCGACACGGGGCCCATCATCGCGCAGGTGGCCGTGCCG GTGCTGCCGGATGACGACGAGAAGGCCCTGAGTTCGCGAATCCTCGCGGAGGAGCACCGGCTCTACCCGCTGGCCGTGCG GCTCGCCGTGACGGGCAAGGTGACGCTGGACGCGGCCCGCACGCGCGTGGAGGCGCGGGCCACGGTGGGCGAACTGGCGC TTCGGAATCCCGGCGCGACGGTCGACCCGGCGTGA
Upstream 100 bases:
>100_bases TCGCCCAGGCGCTGAGCGTGCTGAGCGGCCGGGGCGTGCAGGCCTTCGAGGTCGGCCGCGTGGAAGCGGGCCAGGGCGAG GCCACGGCGGTCATCGACCC
Downstream 100 bases:
>100_bases GCGGACCGAAGACGTTCGACCAGGAGCCGGAGTTCCCCAGCGCCACATCAGGGGATGACGGTGACGTTCAGCCACCGGAG GCCGCTTTGGGGCTGACCAA
Product: phosphoribosylglycinamide formyltransferase
Products: NA
Alternate protein names: 5'-phosphoribosylglycinamide transformylase; GAR transformylase; GART [H]
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSGQRVRLGVLVSGSGSNLQALLDACAREDFPAEVACVVSNVSTAFALERARKAGVTAKVVDHKAHATKEGFEKALLDTL RAANVEWVCLAGFMRLLSADFLGHYAGRVLNIHPSLLPAFPGLHAQRQALERGVKVAGCTVHFVDAGTDTGPIIAQVAVP VLPDDDEKALSSRILAEEHRLYPLAVRLAVTGKVTLDAARTRVEARATVGELALRNPGATVDPA
Sequences:
>Translated_224_residues MSGQRVRLGVLVSGSGSNLQALLDACAREDFPAEVACVVSNVSTAFALERARKAGVTAKVVDHKAHATKEGFEKALLDTL RAANVEWVCLAGFMRLLSADFLGHYAGRVLNIHPSLLPAFPGLHAQRQALERGVKVAGCTVHFVDAGTDTGPIIAQVAVP VLPDDDEKALSSRILAEEHRLYPLAVRLAVTGKVTLDAARTRVEARATVGELALRNPGATVDPA >Mature_223_residues SGQRVRLGVLVSGSGSNLQALLDACAREDFPAEVACVVSNVSTAFALERARKAGVTAKVVDHKAHATKEGFEKALLDTLR AANVEWVCLAGFMRLLSADFLGHYAGRVLNIHPSLLPAFPGLHAQRQALERGVKVAGCTVHFVDAGTDTGPIIAQVAVPV LPDDDEKALSSRILAEEHRLYPLAVRLAVTGKVTLDAARTRVEARATVGELALRNPGATVDPA
Specific function: De novo purine biosynthesis; third step. [C]
COG id: COG0299
COG function: function code F; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GART family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=193, Percent_Identity=44.559585492228, Blast_Score=175, Evalue=3e-44, Organism=Homo sapiens, GI209869995, Length=193, Percent_Identity=44.559585492228, Blast_Score=175, Evalue=3e-44, Organism=Homo sapiens, GI209869993, Length=193, Percent_Identity=44.559585492228, Blast_Score=175, Evalue=3e-44, Organism=Escherichia coli, GI1788846, Length=187, Percent_Identity=45.4545454545455, Blast_Score=178, Evalue=3e-46, Organism=Escherichia coli, GI1787483, Length=157, Percent_Identity=33.1210191082803, Blast_Score=93, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17567511, Length=191, Percent_Identity=41.8848167539267, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6320616, Length=198, Percent_Identity=30.3030303030303, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24582400, Length=194, Percent_Identity=52.0618556701031, Blast_Score=206, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR001555 - InterPro: IPR004607 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =2.1.2.2 [H]
Molecular weight: Translated: 23687; Mature: 23556
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGQRVRLGVLVSGSGSNLQALLDACAREDFPAEVACVVSNVSTAFALERARKAGVTAKV CCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE VDHKAHATKEGFEKALLDTLRAANVEWVCLAGFMRLLSADFLGHYAGRVLNIHPSLLPAF HHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHCC PGLHAQRQALERGVKVAGCTVHFVDAGTDTGPIIAQVAVPVLPDDDEKALSSRILAEEHR CCCHHHHHHHHCCCEEECEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC LYPLAVRLAVTGKVTLDAARTRVEARATVGELALRNPGATVDPA EEEEEEEEEEECEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SGQRVRLGVLVSGSGSNLQALLDACAREDFPAEVACVVSNVSTAFALERARKAGVTAKV CCCEEEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE VDHKAHATKEGFEKALLDTLRAANVEWVCLAGFMRLLSADFLGHYAGRVLNIHPSLLPAF HHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHCC PGLHAQRQALERGVKVAGCTVHFVDAGTDTGPIIAQVAVPVLPDDDEKALSSRILAEEHR CCCHHHHHHHHCCCEEECEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC LYPLAVRLAVTGKVTLDAARTRVEARATVGELALRNPGATVDPA EEEEEEEEEEECEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3301838; 9205837; 9278503; 10954745; 2204419; 1522592; 1631098; 9698564; 10606510 [H]