Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is ybbK [H]

Identifier: 108760414

GI number: 108760414

Start: 3150482

End: 3150919

Strand: Reverse

Name: ybbK [H]

Synonym: MXAN_2699

Alternate gene names: 108760414

Gene position: 3150919-3150482 (Counterclockwise)

Preceding gene: 108763836

Following gene: 108762619

Centisome position: 34.47

GC content: 71.92

Gene sequence:

>438_bases
GTGGTGCTGGTCAGTGCCTGCCTGCTGGGCGAGGCGTGTCGGTACGATGGCCGCTCCCAGCGCTCCGAGCGCGTCCTCGC
GGCGCTGGCGGACAAGGACGTCATCCCCGTGTGCCCGGAGGTGGCCTCGGGCCTGCCCGTGCCGCGCCCTCCCGTCGACC
TGCGAGGAGGCACCGGGGTAGACGTCTGGGCTGGGCGCGCAGTTGCAGTGGAGCGCGCCGCGGGCATCGACCGGACGGAG
GCCTTCCAACAGGGCGCCCGGCTCGCGCTTGAAGCGGCACAACGCTTCGGCGCGACGGTGGCGCTGCTGAAGGAGAAGAG
CCCCTCGTGCGGCAGCCAGCGAGTCTACGAGTCCGGCCAGCTCCGCGCGGGCGAAGGCATCACCACGGCGCTACTTCGCG
CGAAGGACATCACCGTCCTCAGCGACGAGGACCTCTAG

Upstream 100 bases:

>100_bases
CACCTGCCCCCTGGGCGACCCTGCGTCCCCTCGAGACGAGCAAGGTTCAACCGCCCTGCCCTCGCAGGCCGAACGAATCG
CCGCGCTCCAGGAAGCTCGC

Downstream 100 bases:

>100_bases
CAACAGCCCCTACCCGCGCGCCGGAACCTTCCACGTGTCGTGAAGCAGCGGCGCGAAGAGCGCCTCCACCATGCCTTCGG
TGACTTCCGCCAGCGTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MVLVSACLLGEACRYDGRSQRSERVLAALADKDVIPVCPEVASGLPVPRPPVDLRGGTGVDVWAGRAVAVERAAGIDRTE
AFQQGARLALEAAQRFGATVALLKEKSPSCGSQRVYESGQLRAGEGITTALLRAKDITVLSDEDL

Sequences:

>Translated_145_residues
MVLVSACLLGEACRYDGRSQRSERVLAALADKDVIPVCPEVASGLPVPRPPVDLRGGTGVDVWAGRAVAVERAAGIDRTE
AFQQGARLALEAAQRFGATVALLKEKSPSCGSQRVYESGQLRAGEGITTALLRAKDITVLSDEDL
>Mature_145_residues
MVLVSACLLGEACRYDGRSQRSERVLAALADKDVIPVCPEVASGLPVPRPPVDLRGGTGVDVWAGRAVAVERAAGIDRTE
AFQQGARLALEAAQRFGATVALLKEKSPSCGSQRVYESGQLRAGEGITTALLRAKDITVLSDEDL

Specific function: Unknown

COG id: COG1683

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007553 [H]

Pfam domain/function: PF04463 DUF523 [H]

EC number: NA

Molecular weight: Translated: 15276; Mature: 15276

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLVSACLLGEACRYDGRSQRSERVLAALADKDVIPVCPEVASGLPVPRPPVDLRGGTGV
CEEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
DVWAGRAVAVERAAGIDRTEAFQQGARLALEAAQRFGATVALLKEKSPSCGSQRVYESGQ
CHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCC
LRAGEGITTALLRAKDITVLSDEDL
EECCCCHHHHHHHHCCEEEECCCCC
>Mature Secondary Structure
MVLVSACLLGEACRYDGRSQRSERVLAALADKDVIPVCPEVASGLPVPRPPVDLRGGTGV
CEEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
DVWAGRAVAVERAAGIDRTEAFQQGARLALEAAQRFGATVALLKEKSPSCGSQRVYESGQ
CHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCC
LRAGEGITTALLRAKDITVLSDEDL
EECCCCHHHHHHHHCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]