| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is lon
Identifier: 108763822
GI number: 108763822
Start: 4862103
End: 4864586
Strand: Direct
Name: lon
Synonym: MXAN_3993
Alternate gene names: 108763822
Gene position: 4862103-4864586 (Clockwise)
Preceding gene: 108762591
Following gene: 108760188
Centisome position: 53.2
GC content: 67.07
Gene sequence:
>2484_bases ATGTCCGATGAGAAGAAGAAGGGCTCCGCTGCGAGCGCTATGCCCACCGCGATGGCCCCTCCGGGGCTCATCAACAAGGA AGACATCCCGCAGGTGCTTCCCATCCTCCCCCTGCGCAACAGTGTCTTCTTCCCGGGCGGGGTGCTTCCGCTGGCCGTCG GCCGCCAGAAGACCATCGCCCTGATCAAGGACGCCGTGCGTGACGACCAGGTCATCGGTGTCGTCACCCAGCGCCGCGCC GAAGAAGAAGATCCGGGTGCCGCCGACCTCTACACCATGGGGACGGTCGCCCGCATCGTGAAGCTCCTGAAGATGGGCGA GGACAACTACTCGCTCGTGGTGCAGGGGCTCGCCCGCTTCCGCGTGGTGGAGCTGGTCCAGGAAGCGCCCTACCTCAAGG CCCGCGTGGACGCCGTGGAGGACAAGACCTCTTCGGAGAACGTGGAAGTCGAGGCGCTGGGCATCAACCTCAAGAAGCTG GCGCGCGAGGTCATCGAGCTGATGCCCGAGCTGCCCGCCGCCGCCACCGAGCTGGTGGAGAGCATCACCCACCCCGGCCA CCTGGCGGACCTGATCGCCGCCAACGTGGACGTGCCCATCGAGGAGAAGCAGGCCGTCCTGGAGACGGTGGACCTCAAGG CCCGGATGAAGCTCGTGCTGGAGCTGCTCAACCGGAAGCGGGAGATCCTCAAGCTCTCCAACAAGATCGACTCCGCCGTG AAGGGCGAGATGTCGAAGACCCAGCGCGAGTACTACCTGCGCCAGCAGCTCAAGGCCATCAAGGAAGAGCTGGGGGAGAT GGGCGAGGAGGAAGAGGAGCTCGACGAGCTGCAGGAGCGCCTGAAGAAGGCCGGCCTGCCGCCCGACGTGGAGAAGGTCG CCAACAAGGAGCTCAACCGCCTGAAGACCATTCCGGCGGCCTCCAGCGAGTACACCGTCGCGCGCACCTACCTGGATTGG ATCGCCGACCTGCCGTGGGCGAAGATCTCCGAGGACAACCTCGACATCGAGAACGCGCGCCAGCAGCTGGACAAGGATCA CTTCGGCATCAAGAAGGTGAAGAAGCGCATCCTGGAGTACCTGGCCGTCCGCAAGCTGAAGAACGACATGCGTGGCCCCA TCCTGTGCCTCGTCGGTCCGCCGGGCGTCGGCAAGACGTCGCTGGGCCAGAGCGTGGCCAAGGCCACGGGCCGCAAGTTC GTGCGCCTGTCGCTGGGCGGCGTGCGTGACGAGGCGGAGATCCGCGGCCACCGCCGGACCTATGTCGGCGCCCTCCCCGG CCGCTTCATCCAGAGCATGAAGAAGGCCGGCACGAAGAACCCGGTCATGATGCTGGACGAAATTGACAAGCTCGGCGCCG ACTTCCGTGGCGACCCGAGCGCGGCGCTCCTCGAGGTGCTGGATCCGGAGCAGAACAACACGTTCAGCGACCACTACCTC GACGTGCCCTTCGATTTGTCCAAGGTGATGTTCGTCGCCACGGCGAACCAGCTCGACCCCATCCCCGGTCCGCTGCGTGA CCGCATGGAGATCATCGAGCTGACGGGCTACACCTTCGAGGAGAAGCAGAGCATCGCCCGCATCCACCTGGTGCCCAAGC AGCTCAAGGAGCACGGGCTGAGCCCGGACCACATCGACATCACCGACGAGGCGCTGCTCACGCTGACCACCGCGTACACG CGCGAGGCCGGTGTGCGCAACCTGGAGCGCCGCATCGCGGACATCTGCCGCGCGGTGGCGGTGGAGGTGGCCGGCGGGAA GACGGAGAAGCAGACCATCAACGCCGACCGGGTGAAGGAGATCCTCGGGCCCGAGATGTTCTACTCCGAGGTCGCCGAGC GCACCGAGGTTCCGGGTGTGGCCACGGGCCTGGCCTGGACGGCGGCGGGTGGCGACCTGCTCTTCATCGAGGCGACGAAG ATGGCGGGCAAGGGCGGCATGACGCTCACCGGCCAGTTGGGCGACGTGATGAAGGAGAGCGCCACGGCGGCGCTGAGCTA CCTGCGCAGCAAGGCCGAGCAGCTCGGCATCAGCCCGAACTTCCTGGAGAAGACGGACCTGCACCTGCACTTCCCGGCGG GCTCCATTCCGAAGGACGGGCCTTCCGCGGGCGTCACCATCCTGACGGCGCTCACCAGCCTCCTGACGGGCATCCGCGTG CGTCACGACACGGCGATGACGGGCGAGGCCACGCTGCGTGGCCTGGTGCTGCCGGTGGGTGGCATCAAGGAGAAGGTGCT GGCGGCGCACCGAGCGGGCATCAAGCGGGTCATCCTGCCCGAGCGGTGCCGCAAGGACCTGATCGACGTGCCGGACCAGG CGCGCAACGAGCTGGAGTTCATCTTCGTCACCCACATGGACGACGTCCTGAAGGCGGCGCTGGAGACGCCTCCCGTCGGC GTGGCGGGAACCCCGGGCGGTGAGCCGGGCAAGGAGGCTCCGCTGCCGAAGCCGGCCGAGTCCGCCCCTGAGGTCCGCGC CTAG
Upstream 100 bases:
>100_bases CACTGCGTTTGCCATGTCCGTTTTGGTTGTTACGTTGGTTCATCCGCCGCAGAAAACCTGGAAATGTTCACTGGTTGTCG AAGAGAAAAGGCTGAATTTC
Downstream 100 bases:
>100_bases CGCACGGCCTTCCAGCCAATAGGAAGTGACACGGGCAGGTTCCCTTCTTCCGGGAACCTGCCCGTTGTCTTTGCGGGGCA GGTGGCGCTCAGAGCGAGAA
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La 2
Number of amino acids: Translated: 827; Mature: 826
Protein sequence:
>827_residues MSDEKKKGSAASAMPTAMAPPGLINKEDIPQVLPILPLRNSVFFPGGVLPLAVGRQKTIALIKDAVRDDQVIGVVTQRRA EEEDPGAADLYTMGTVARIVKLLKMGEDNYSLVVQGLARFRVVELVQEAPYLKARVDAVEDKTSSENVEVEALGINLKKL AREVIELMPELPAAATELVESITHPGHLADLIAANVDVPIEEKQAVLETVDLKARMKLVLELLNRKREILKLSNKIDSAV KGEMSKTQREYYLRQQLKAIKEELGEMGEEEEELDELQERLKKAGLPPDVEKVANKELNRLKTIPAASSEYTVARTYLDW IADLPWAKISEDNLDIENARQQLDKDHFGIKKVKKRILEYLAVRKLKNDMRGPILCLVGPPGVGKTSLGQSVAKATGRKF VRLSLGGVRDEAEIRGHRRTYVGALPGRFIQSMKKAGTKNPVMMLDEIDKLGADFRGDPSAALLEVLDPEQNNTFSDHYL DVPFDLSKVMFVATANQLDPIPGPLRDRMEIIELTGYTFEEKQSIARIHLVPKQLKEHGLSPDHIDITDEALLTLTTAYT REAGVRNLERRIADICRAVAVEVAGGKTEKQTINADRVKEILGPEMFYSEVAERTEVPGVATGLAWTAAGGDLLFIEATK MAGKGGMTLTGQLGDVMKESATAALSYLRSKAEQLGISPNFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTSLLTGIRV RHDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLIDVPDQARNELEFIFVTHMDDVLKAALETPPVG VAGTPGGEPGKEAPLPKPAESAPEVRA
Sequences:
>Translated_827_residues MSDEKKKGSAASAMPTAMAPPGLINKEDIPQVLPILPLRNSVFFPGGVLPLAVGRQKTIALIKDAVRDDQVIGVVTQRRA EEEDPGAADLYTMGTVARIVKLLKMGEDNYSLVVQGLARFRVVELVQEAPYLKARVDAVEDKTSSENVEVEALGINLKKL AREVIELMPELPAAATELVESITHPGHLADLIAANVDVPIEEKQAVLETVDLKARMKLVLELLNRKREILKLSNKIDSAV KGEMSKTQREYYLRQQLKAIKEELGEMGEEEEELDELQERLKKAGLPPDVEKVANKELNRLKTIPAASSEYTVARTYLDW IADLPWAKISEDNLDIENARQQLDKDHFGIKKVKKRILEYLAVRKLKNDMRGPILCLVGPPGVGKTSLGQSVAKATGRKF VRLSLGGVRDEAEIRGHRRTYVGALPGRFIQSMKKAGTKNPVMMLDEIDKLGADFRGDPSAALLEVLDPEQNNTFSDHYL DVPFDLSKVMFVATANQLDPIPGPLRDRMEIIELTGYTFEEKQSIARIHLVPKQLKEHGLSPDHIDITDEALLTLTTAYT REAGVRNLERRIADICRAVAVEVAGGKTEKQTINADRVKEILGPEMFYSEVAERTEVPGVATGLAWTAAGGDLLFIEATK MAGKGGMTLTGQLGDVMKESATAALSYLRSKAEQLGISPNFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTSLLTGIRV RHDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLIDVPDQARNELEFIFVTHMDDVLKAALETPPVG VAGTPGGEPGKEAPLPKPAESAPEVRA >Mature_826_residues SDEKKKGSAASAMPTAMAPPGLINKEDIPQVLPILPLRNSVFFPGGVLPLAVGRQKTIALIKDAVRDDQVIGVVTQRRAE EEDPGAADLYTMGTVARIVKLLKMGEDNYSLVVQGLARFRVVELVQEAPYLKARVDAVEDKTSSENVEVEALGINLKKLA REVIELMPELPAAATELVESITHPGHLADLIAANVDVPIEEKQAVLETVDLKARMKLVLELLNRKREILKLSNKIDSAVK GEMSKTQREYYLRQQLKAIKEELGEMGEEEEELDELQERLKKAGLPPDVEKVANKELNRLKTIPAASSEYTVARTYLDWI ADLPWAKISEDNLDIENARQQLDKDHFGIKKVKKRILEYLAVRKLKNDMRGPILCLVGPPGVGKTSLGQSVAKATGRKFV RLSLGGVRDEAEIRGHRRTYVGALPGRFIQSMKKAGTKNPVMMLDEIDKLGADFRGDPSAALLEVLDPEQNNTFSDHYLD VPFDLSKVMFVATANQLDPIPGPLRDRMEIIELTGYTFEEKQSIARIHLVPKQLKEHGLSPDHIDITDEALLTLTTAYTR EAGVRNLERRIADICRAVAVEVAGGKTEKQTINADRVKEILGPEMFYSEVAERTEVPGVATGLAWTAAGGDLLFIEATKM AGKGGMTLTGQLGDVMKESATAALSYLRSKAEQLGISPNFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTSLLTGIRVR HDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLIDVPDQARNELEFIFVTHMDDVLKAALETPPVGV AGTPGGEPGKEAPLPKPAESAPEVRA
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain
Homologues:
Organism=Homo sapiens, GI31377667, Length=835, Percent_Identity=44.4311377245509, Blast_Score=660, Evalue=0.0, Organism=Homo sapiens, GI21396489, Length=837, Percent_Identity=39.3070489844683, Blast_Score=568, Evalue=1e-161, Organism=Escherichia coli, GI1786643, Length=770, Percent_Identity=47.9220779220779, Blast_Score=727, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=659, Percent_Identity=42.0333839150228, Blast_Score=516, Evalue=1e-146, Organism=Caenorhabditis elegans, GI17556486, Length=794, Percent_Identity=36.0201511335013, Blast_Score=493, Evalue=1e-139, Organism=Saccharomyces cerevisiae, GI6319449, Length=696, Percent_Identity=41.5229885057471, Blast_Score=523, Evalue=1e-149, Organism=Drosophila melanogaster, GI221513036, Length=709, Percent_Identity=44.0056417489422, Blast_Score=578, Evalue=1e-165, Organism=Drosophila melanogaster, GI24666867, Length=709, Percent_Identity=44.0056417489422, Blast_Score=578, Evalue=1e-165,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): LON2_MYXXA (P36774)
Other databases:
- EMBL: D13204 - EMBL: L19301 - PIR: A36895 - ProteinModelPortal: P36774 - BRENDA: 3.4.21.53 - GO: GO:0005737 - GO: GO:0006508 - InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 - PRINTS: PR00830 - SMART: SM00382 - SMART: SM00464 - TIGRFAMs: TIGR00763
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C; SSF88697 PUA-like; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =3.4.21.53
Molecular weight: Translated: 90440; Mature: 90308
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS01046 LON_SER
Important sites: ACT_SITE 702-702 ACT_SITE 745-745
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEKKKGSAASAMPTAMAPPGLINKEDIPQVLPILPLRNSVFFPGGVLPLAVGRQKTIA CCCCCCCCCCHHCCCCCCCCCCCCCHHCCHHHHCCCCCCCCEECCCCCHHHCCCCHHHHH LIKDAVRDDQVIGVVTQRRAEEEDPGAADLYTMGTVARIVKLLKMGEDNYSLVVQGLARF HHHHHHCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RVVELVQEAPYLKARVDAVEDKTSSENVEVEALGINLKKLAREVIELMPELPAAATELVE HHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH SITHPGHLADLIAANVDVPIEEKQAVLETVDLKARMKLVLELLNRKREILKLSNKIDSAV HHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGEMSKTQREYYLRQQLKAIKEELGEMGEEEEELDELQERLKKAGLPPDVEKVANKELNR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LKTIPAASSEYTVARTYLDWIADLPWAKISEDNLDIENARQQLDKDHFGIKKVKKRILEY HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCHHCCCHHHHHHHHHHH LAVRKLKNDMRGPILCLVGPPGVGKTSLGQSVAKATGRKFVRLSLGGVRDEAEIRGHRRT HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCHHH YVGALPGRFIQSMKKAGTKNPVMMLDEIDKLGADFRGDPSAALLEVLDPEQNNTFSDHYL HHHCCCHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEE DVPFDLSKVMFVATANQLDPIPGPLRDRMEIIELTGYTFEEKQSIARIHLVPKQLKEHGL CCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHCCC SPDHIDITDEALLTLTTAYTREAGVRNLERRIADICRAVAVEVAGGKTEKQTINADRVKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHH ILGPEMFYSEVAERTEVPGVATGLAWTAAGGDLLFIEATKMAGKGGMTLTGQLGDVMKES HHCHHHHHHHHHHHHCCCCCHHCCEEEECCCCEEEEEEEHHCCCCCCEEECHHHHHHHHH ATAALSYLRSKAEQLGISPNFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTSLLTGIRV HHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHE RHDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLIDVPDQARNELEF ECCCCCCCHHHHHEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHCCCEEE IFVTHMDDVLKAALETPPVGVAGTPGGEPGKEAPLPKPAESAPEVRA EEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDEKKKGSAASAMPTAMAPPGLINKEDIPQVLPILPLRNSVFFPGGVLPLAVGRQKTIA CCCCCCCCCHHCCCCCCCCCCCCCHHCCHHHHCCCCCCCCEECCCCCHHHCCCCHHHHH LIKDAVRDDQVIGVVTQRRAEEEDPGAADLYTMGTVARIVKLLKMGEDNYSLVVQGLARF HHHHHHCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RVVELVQEAPYLKARVDAVEDKTSSENVEVEALGINLKKLAREVIELMPELPAAATELVE HHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH SITHPGHLADLIAANVDVPIEEKQAVLETVDLKARMKLVLELLNRKREILKLSNKIDSAV HHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGEMSKTQREYYLRQQLKAIKEELGEMGEEEEELDELQERLKKAGLPPDVEKVANKELNR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LKTIPAASSEYTVARTYLDWIADLPWAKISEDNLDIENARQQLDKDHFGIKKVKKRILEY HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCHHCCCHHHHHHHHHHH LAVRKLKNDMRGPILCLVGPPGVGKTSLGQSVAKATGRKFVRLSLGGVRDEAEIRGHRRT HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCHHH YVGALPGRFIQSMKKAGTKNPVMMLDEIDKLGADFRGDPSAALLEVLDPEQNNTFSDHYL HHHCCCHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEE DVPFDLSKVMFVATANQLDPIPGPLRDRMEIIELTGYTFEEKQSIARIHLVPKQLKEHGL CCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHCCC SPDHIDITDEALLTLTTAYTREAGVRNLERRIADICRAVAVEVAGGKTEKQTINADRVKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHH ILGPEMFYSEVAERTEVPGVATGLAWTAAGGDLLFIEATKMAGKGGMTLTGQLGDVMKES HHCHHHHHHHHHHHHCCCCCHHCCEEEECCCCEEEEEEEHHCCCCCCEEECHHHHHHHHH ATAALSYLRSKAEQLGISPNFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTSLLTGIRV HHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHE RHDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLIDVPDQARNELEF ECCCCCCCHHHHHEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHCCCEEE IFVTHMDDVLKAALETPPVGVAGTPGGEPGKEAPLPKPAESAPEVRA EEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8331083; 8331082