| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pgl [H]
Identifier: 108763790
GI number: 108763790
Start: 1093919
End: 1094590
Strand: Reverse
Name: pgl [H]
Synonym: MXAN_0952
Alternate gene names: 108763790
Gene position: 1094590-1093919 (Counterclockwise)
Preceding gene: 108761123
Following gene: 108762961
Centisome position: 11.98
GC content: 73.36
Gene sequence:
>672_bases ATGAGCGCCACGCGCACGCACGTCGTGCCCACCGAGTCCCTGCCCCGGGAAGCCGCGACGTGGATGGCGCGCGCGCTCCA GGACACGCTCGCCACCCAGCGTCGCGTCAGCCTGGCCCTGTCGGGCGGCAGCACGCCGGGGCCCGCGTACCGGGCGCTGG CGGCGCAGGTACTTCCCTGGGAGCGCGTGGACGTCTACTTCGTGGACGAGCGCTTCGTGCCGCCCGACCACGCGGACAGC AACTACCGGATGGTGGAGGACACACTGCTGCGTCCTCTTCGGCTGTCGCCGTCGCAGGTGTTCCGCATGGAGGGTGAGCG CGAGGACCGGGACGCCGCCGCGAAGGACTACGCGGCGAAGCTGCCTGCTTCCCTGGACGTGGTGCTGCTGGGCATGGGGG AGGACGGGCACACGGCCAGCCTCTTCCCCGGCCACCCCGCGCTGGAGGAATCCGAGCAGCGCGTCCTGGCGGTGGTGGGG CCCAAGCCGCCGCCCTGGCGGATGACGTTGACGCTGCCGGTATTGCGGTCCGCGCGGCACGTGCTGACCCTCGTATCGGG GGCGGGCAAGCAGGACACGGTGCGCCGGGCGCTGGCGGGGGACCTGAGCCTCCCCGCCGCCCGGGTGACGAATTCGGAGT GGATGCTGGACCCCGCCGCCGCCGGGCGGTGA
Upstream 100 bases:
>100_bases CCGGCGAGGGCGGACCGGCGCACGGCTACCCCGGTGGCAGCGCGGGCCCGGATGCCGCGGCCGCGCTGCTGGCCCGCGAT GGCCGCCGGTGGACCGGCCT
Downstream 100 bases:
>100_bases GGGCTCCCAGTCGCGAACCTTCCAGGAGGAACCAACGATGAGTGAGTCAGCGGGCGCGCAGTTCGGCGTGGCGGGAATGG GCGTCATGGGGGCGAGCCTC
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSATRTHVVPTESLPREAATWMARALQDTLATQRRVSLALSGGSTPGPAYRALAAQVLPWERVDVYFVDERFVPPDHADS NYRMVEDTLLRPLRLSPSQVFRMEGEREDRDAAAKDYAAKLPASLDVVLLGMGEDGHTASLFPGHPALEESEQRVLAVVG PKPPPWRMTLTLPVLRSARHVLTLVSGAGKQDTVRRALAGDLSLPAARVTNSEWMLDPAAAGR
Sequences:
>Translated_223_residues MSATRTHVVPTESLPREAATWMARALQDTLATQRRVSLALSGGSTPGPAYRALAAQVLPWERVDVYFVDERFVPPDHADS NYRMVEDTLLRPLRLSPSQVFRMEGEREDRDAAAKDYAAKLPASLDVVLLGMGEDGHTASLFPGHPALEESEQRVLAVVG PKPPPWRMTLTLPVLRSARHVLTLVSGAGKQDTVRRALAGDLSLPAARVTNSEWMLDPAAAGR >Mature_222_residues SATRTHVVPTESLPREAATWMARALQDTLATQRRVSLALSGGSTPGPAYRALAAQVLPWERVDVYFVDERFVPPDHADSN YRMVEDTLLRPLRLSPSQVFRMEGEREDRDAAAKDYAAKLPASLDVVLLGMGEDGHTASLFPGHPALEESEQRVLAVVGP KPPPWRMTLTLPVLRSARHVLTLVSGAGKQDTVRRALAGDLSLPAARVTNSEWMLDPAAAGR
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=207, Percent_Identity=42.0289855072464, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI52145310, Length=171, Percent_Identity=36.8421052631579, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI115533058, Length=208, Percent_Identity=34.1346153846154, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI115533060, Length=208, Percent_Identity=34.1346153846154, Blast_Score=97, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17554876, Length=205, Percent_Identity=24.8780487804878, Blast_Score=74, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6321687, Length=212, Percent_Identity=36.3207547169811, Blast_Score=108, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6321957, Length=233, Percent_Identity=32.618025751073, Blast_Score=107, Evalue=1e-24, Organism=Drosophila melanogaster, GI24641119, Length=219, Percent_Identity=36.0730593607306, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 24323; Mature: 24192
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATRTHVVPTESLPREAATWMARALQDTLATQRRVSLALSGGSTPGPAYRALAAQVLPW CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCC ERVDVYFVDERFVPPDHADSNYRMVEDTLLRPLRLSPSQVFRMEGEREDRDAAAKDYAAK CCEEEEEECCCCCCCCCCCCCCEEHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH LPASLDVVLLGMGEDGHTASLFPGHPALEESEQRVLAVVGPKPPPWRMTLTLPVLRSARH CCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEHHHHHHHHH VLTLVSGAGKQDTVRRALAGDLSLPAARVTNSEWMLDPAAAGR HHHHHCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEECCCCCCC >Mature Secondary Structure SATRTHVVPTESLPREAATWMARALQDTLATQRRVSLALSGGSTPGPAYRALAAQVLPW CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCC ERVDVYFVDERFVPPDHADSNYRMVEDTLLRPLRLSPSQVFRMEGEREDRDAAAKDYAAK CCEEEEEECCCCCCCCCCCCCCEEHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH LPASLDVVLLGMGEDGHTASLFPGHPALEESEQRVLAVVGPKPPPWRMTLTLPVLRSARH CCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEHHHHHHHHH VLTLVSGAGKQDTVRRALAGDLSLPAARVTNSEWMLDPAAAGR HHHHHCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231; 9298645 [H]