| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ybaL [H]
Identifier: 108763743
GI number: 108763743
Start: 2617543
End: 2619294
Strand: Direct
Name: ybaL [H]
Synonym: MXAN_2260
Alternate gene names: 108763743
Gene position: 2617543-2619294 (Clockwise)
Preceding gene: 108763750
Following gene: 108759482
Centisome position: 28.64
GC content: 67.47
Gene sequence:
>1752_bases GTGCCTCACGACACCACGCTCATCGCCACCATCGCAGTTGGACTCGGACTGGCCTTCGTCGGTGGGTTCGTCGCACGGTG GCTGAAGCTGCCACCTTTGGTGGGCTATCTCCTGGCGGGCGTGGCCGTGGGGCCATTCACGCCGGGCTTCGTCGCGGATG GGGGCCTTGCCGGTCAGTTGGCGGAGATTGGCGTCATCCTGCTGATGTTCGGCGTGGGGATTCATTTCTCCATCAAGGAC CTGCTCGCCGTGCGCAATATCGCGGTGCCGGGCGCCGTCGTGCAGATCGCGGCGGCCACCGTGATGGGGACCGCGGTCTC GCACTGGTGGGGTTGGAGCCTGGGTGCGGGCCTGGTGTTCGGCCTCGCGCTGTCCACCGCCAGCACCGTGGTGCTGCTGC GCGCCTTGGAGGAGCGGGGCATCCTCGATTCGGTGAATGGCCGCATCGCGGTGGGTTGGCTGATTGTCGAGGACCTGGCG ATGGTGCTCGCCCTGGTCCTCCTCCCCGCGCTGGGCAACGTCCTTGGCTCCGCCGACACGCAGACGCCCGCGACGGCGGC CGCTGGAGACAGCCTCATCTGGACCCTGGCCTTCACGCTGGGGAAGGTGTGCCTCTTCGTGGCGCTGATGGTGGTCGCCG GCACGCGGCTGGTGCCCTGGCTGCTGACCCAGGTGGCCAAGACGGGCTCCCGCGAGCTGTTCACGTTGTCGGTGCTGGCG GTGTCGCTGGGGATTGCGTTCGGGGCCGCCGCGCTCTTCGGCGTCTCCTTCGCGCTGGGCGCCTTCTTCGCGGGCGTGGT GGTCAGTGAGTCGGAGCTCAGCCACCGGGTGGCGGAGGATTCGCTGCCGCTCCAGGACGCGTTCTCGGTGCTGTTCTTCG TGTCGGTGGGAATGCTCTTCGACCCGATGGTGATGGTGAAGCAGCCGCTCGAGGTCCTCGCCGTGCTGGGCATCATCGTC CTGGGCAAGTCGCTGGCCGCCTTCTTCATCGTGTTGGCGTTCCGCTACCCGGTGAACACCGCCCTCACGGTGTCCGCGAG CCTGGCGCAGATTGGGGAGTTCTCATTCATCCTGGTGGGATTGGGCGTCACGCTCGGGCTGCTGCCGAAAGAAGGGCAGA GCCTGGTGTTGTCGGGAGCCCTGCTGTCCATCACCCTCAATCCGCTCGTCTTCAAGACCATTGATCCGCTGCTGGCGTGG CTACGCCGGCACCCAAGGTTCGCCGCGCGCATGGACCCCGAGGAAGATGAGCTGTCCGACCTGCCCATTGGCATGGGGGA CGTGCAACTGCGCGAGCACGCGGTGTTGATTGGCTACGGGCGCGTGGGCGGCGTGATTGGCCAGAGCCTGACGGAGCAGA AGATTCCCTTCGTGGTCGTGGAGCAGAACCGCGAGTACGTGGAGCGCCTTCGTGAGGAGGGCGTGCCCGCCATCTACGGG GACGCCGCGGTGCCCGGCATCCTGGAGCACGCGCACCTGGATACGGCGTCCATCCTCATCGTCGCCACGCCGGACGCGCT GCAGGCCCGCGCCATCGTGGAGCAGGCCAAAGGCGTGAATCCGTCCCTTCCCGCGGTGGTGCGCACGCATGGGGACGAGG AGCGGGATTACTTGGTGTCATTGGGCGTGGACCGGGTGGTGATGGGCGAGCACGCGCTGGCACGGAGCATGTTGGACTAC GTGCTGGAGCGACTGTCCGCACTGAAGGCCGGGCCTCTGTTGCCGGCACCCGCGGACGCCGTGGTGCCTTGA
Upstream 100 bases:
>100_bases ATGCTCGAAAGGTGTTCGAGGGTTCCGCCCCCAGGGCCGGCTTCCTCGTTGCGCCGCTTTTTCATACCCCCATCCGCGTA GCGCCCAGGGAGATTCCGCC
Downstream 100 bases:
>100_bases GGCCCGCGGGAACTGCGGTGCGGCTCCCACTCGAGACGGCGTCGTCGTGACATGAAAAAGGCCGAGGCGCGGCAAGCGCC TCGGCCCGTGCGTTTCATCG
Product: potassium efflux system family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 582
Protein sequence:
>583_residues MPHDTTLIATIAVGLGLAFVGGFVARWLKLPPLVGYLLAGVAVGPFTPGFVADGGLAGQLAEIGVILLMFGVGIHFSIKD LLAVRNIAVPGAVVQIAAATVMGTAVSHWWGWSLGAGLVFGLALSTASTVVLLRALEERGILDSVNGRIAVGWLIVEDLA MVLALVLLPALGNVLGSADTQTPATAAAGDSLIWTLAFTLGKVCLFVALMVVAGTRLVPWLLTQVAKTGSRELFTLSVLA VSLGIAFGAAALFGVSFALGAFFAGVVVSESELSHRVAEDSLPLQDAFSVLFFVSVGMLFDPMVMVKQPLEVLAVLGIIV LGKSLAAFFIVLAFRYPVNTALTVSASLAQIGEFSFILVGLGVTLGLLPKEGQSLVLSGALLSITLNPLVFKTIDPLLAW LRRHPRFAARMDPEEDELSDLPIGMGDVQLREHAVLIGYGRVGGVIGQSLTEQKIPFVVVEQNREYVERLREEGVPAIYG DAAVPGILEHAHLDTASILIVATPDALQARAIVEQAKGVNPSLPAVVRTHGDEERDYLVSLGVDRVVMGEHALARSMLDY VLERLSALKAGPLLPAPADAVVP
Sequences:
>Translated_583_residues MPHDTTLIATIAVGLGLAFVGGFVARWLKLPPLVGYLLAGVAVGPFTPGFVADGGLAGQLAEIGVILLMFGVGIHFSIKD LLAVRNIAVPGAVVQIAAATVMGTAVSHWWGWSLGAGLVFGLALSTASTVVLLRALEERGILDSVNGRIAVGWLIVEDLA MVLALVLLPALGNVLGSADTQTPATAAAGDSLIWTLAFTLGKVCLFVALMVVAGTRLVPWLLTQVAKTGSRELFTLSVLA VSLGIAFGAAALFGVSFALGAFFAGVVVSESELSHRVAEDSLPLQDAFSVLFFVSVGMLFDPMVMVKQPLEVLAVLGIIV LGKSLAAFFIVLAFRYPVNTALTVSASLAQIGEFSFILVGLGVTLGLLPKEGQSLVLSGALLSITLNPLVFKTIDPLLAW LRRHPRFAARMDPEEDELSDLPIGMGDVQLREHAVLIGYGRVGGVIGQSLTEQKIPFVVVEQNREYVERLREEGVPAIYG DAAVPGILEHAHLDTASILIVATPDALQARAIVEQAKGVNPSLPAVVRTHGDEERDYLVSLGVDRVVMGEHALARSMLDY VLERLSALKAGPLLPAPADAVVP >Mature_582_residues PHDTTLIATIAVGLGLAFVGGFVARWLKLPPLVGYLLAGVAVGPFTPGFVADGGLAGQLAEIGVILLMFGVGIHFSIKDL LAVRNIAVPGAVVQIAAATVMGTAVSHWWGWSLGAGLVFGLALSTASTVVLLRALEERGILDSVNGRIAVGWLIVEDLAM VLALVLLPALGNVLGSADTQTPATAAAGDSLIWTLAFTLGKVCLFVALMVVAGTRLVPWLLTQVAKTGSRELFTLSVLAV SLGIAFGAAALFGVSFALGAFFAGVVVSESELSHRVAEDSLPLQDAFSVLFFVSVGMLFDPMVMVKQPLEVLAVLGIIVL GKSLAAFFIVLAFRYPVNTALTVSASLAQIGEFSFILVGLGVTLGLLPKEGQSLVLSGALLSITLNPLVFKTIDPLLAWL RRHPRFAARMDPEEDELSDLPIGMGDVQLREHAVLIGYGRVGGVIGQSLTEQKIPFVVVEQNREYVERLREEGVPAIYGD AAVPGILEHAHLDTASILIVATPDALQARAIVEQAKGVNPSLPAVVRTHGDEERDYLVSLGVDRVVMGEHALARSMLDYV LERLSALKAGPLLPAPADAVVP
Specific function: Unknown
COG id: COG4651
COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=391, Percent_Identity=25.3196930946292, Blast_Score=86, Evalue=7e-17, Organism=Escherichia coli, GI1786685, Length=559, Percent_Identity=55.9928443649374, Blast_Score=572, Evalue=1e-164, Organism=Escherichia coli, GI1789749, Length=580, Percent_Identity=28.9655172413793, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI1786232, Length=543, Percent_Identity=26.8876611418048, Blast_Score=152, Evalue=4e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 61202; Mature: 61071
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHDTTLIATIAVGLGLAFVGGFVARWLKLPPLVGYLLAGVAVGPFTPGFVADGGLAGQL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH AEIGVILLMFGVGIHFSIKDLLAVRNIAVPGAVVQIAAATVMGTAVSHWWGWSLGAGLVF HHHHHHHHHHHCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH GLALSTASTVVLLRALEERGILDSVNGRIAVGWLIVEDLAMVLALVLLPALGNVLGSADT HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QTPATAAAGDSLIWTLAFTLGKVCLFVALMVVAGTRLVPWLLTQVAKTGSRELFTLSVLA CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHH VSLGIAFGAAALFGVSFALGAFFAGVVVSESELSHRVAEDSLPLQDAFSVLFFVSVGMLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DPMVMVKQPLEVLAVLGIIVLGKSLAAFFIVLAFRYPVNTALTVSASLAQIGEFSFILVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCHHHHHHH LGVTLGLLPKEGQSLVLSGALLSITLNPLVFKTIDPLLAWLRRHPRFAARMDPEEDELSD HHHHHCCCCCCCCEEEEECEEEEEEECHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHC LPIGMGDVQLREHAVLIGYGRVGGVIGQSLTEQKIPFVVVEQNREYVERLREEGVPAIYG CCCCCCCCEEECCEEEEEECHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEC DAAVPGILEHAHLDTASILIVATPDALQARAIVEQAKGVNPSLPAVVRTHGDEERDYLVS CCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHH LGVDRVVMGEHALARSMLDYVLERLSALKAGPLLPAPADAVVP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PHDTTLIATIAVGLGLAFVGGFVARWLKLPPLVGYLLAGVAVGPFTPGFVADGGLAGQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH AEIGVILLMFGVGIHFSIKDLLAVRNIAVPGAVVQIAAATVMGTAVSHWWGWSLGAGLVF HHHHHHHHHHHCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH GLALSTASTVVLLRALEERGILDSVNGRIAVGWLIVEDLAMVLALVLLPALGNVLGSADT HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QTPATAAAGDSLIWTLAFTLGKVCLFVALMVVAGTRLVPWLLTQVAKTGSRELFTLSVLA CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHH VSLGIAFGAAALFGVSFALGAFFAGVVVSESELSHRVAEDSLPLQDAFSVLFFVSVGMLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DPMVMVKQPLEVLAVLGIIVLGKSLAAFFIVLAFRYPVNTALTVSASLAQIGEFSFILVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCHHHHHHH LGVTLGLLPKEGQSLVLSGALLSITLNPLVFKTIDPLLAWLRRHPRFAARMDPEEDELSD HHHHHCCCCCCCCEEEEECEEEEEEECHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHC LPIGMGDVQLREHAVLIGYGRVGGVIGQSLTEQKIPFVVVEQNREYVERLREEGVPAIYG CCCCCCCCEEECCEEEEEECHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEC DAAVPGILEHAHLDTASILIVATPDALQARAIVEQAKGVNPSLPAVVRTHGDEERDYLVS CCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHH LGVDRVVMGEHALARSMLDYVLERLSALKAGPLLPAPADAVVP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 7721718 [H]