| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is macB [H]
Identifier: 108759482
GI number: 108759482
Start: 2630996
End: 2633425
Strand: Direct
Name: macB [H]
Synonym: MXAN_2268
Alternate gene names: 108759482
Gene position: 2630996-2633425 (Clockwise)
Preceding gene: 108763743
Following gene: 108759626
Centisome position: 28.79
GC content: 72.84
Gene sequence:
>2430_bases ATGACCCTTGGCCAGGACCTCCGCTTCGCGCTGCGCCGGCTTCGTGGCAGTCCCACCTTCACGCTGGTCGCGGTGGCCAC GCTCGCGCTTGGGATTGGCGCCAACGTCTCCATCTTCAGCGTGGTGAATGCCGTGTTGCTGCGGCCGCTGCCCATGCACG ACGACGCCCGTCTGGTGCGCATGTACAGCCTGAGGACGCAGGGGCCGGGGCCCACCTCCGTGCTGGACTTCATGGACCTG CGGGAGCAGAGCCGCACGCTGAAGGGCCTGTCCGCGGTGGCGCCCGTGGCGGTGACGCTGGCGGCGGACAGCGCGGACAC CTTGCCGGAGAAGGTGCAGGCGGGGATGGTGACGGGCGACTTCTTCCCGATGCTGGGCGCTCGCGTGCAGTTGGGGCGCG CGCTTCACCCCGATGACGTCCGGCCCGGCGCTCCGAAGGTGGCGGTGATTTCCCATGCGCTGTGGCAGCGGCGCTTCGGC GGGAGCGCCGCCGTGCTGGGGCGCTCGGTGGACCTGGGCGCTCCGGAGCCGTGGACCGTGGTGGGGGTGATGGCGCCGGG CTTCGACTTCCCCGCACGCTCGGAGCTGTGGAGCCCGCTGCTCTGGGAAGAGGGCATGACGAAGCCCGAGGGGCGCGGGG CGCACTGGCTGGAGGTGTATGGCCGCCTGGGCCCGGACGTGGCGCTGGAGTCCGCGCGCACCGAGCTCTCCGCCATCGCC CACCGTCTCGCGGGGCAGTACCCCCAGACGAACGAGGGCAAGGATGCGCGCGTGGAGCCGCTGCGCGACGTGCTGGTGGG CAACGTCCGTCCGTCGCTCCTGTTGATGCTGGGCGCGGTGGGGTTGGTGTTGCTCATCGCGTGCGCGAACCTCACGCACC TGCTCCTGGCGCGGGCAGCCTCGCGTGAGGGGGAAGTCTCCGTGCGCATCGCCCTGGGCGCGAGCCGTGGCCGCATCGCG CGCGAGCTGTTGGTGGAGTGCGGCGTGCTCGCGGGTCTGGGCGCGGCTGTGGGGTTGCTGGTGGCGATGTGGGCGCTGGA TGCGCTGGCCACGTGGGGGCCTCAGGACATTCCCCGCATCGAAGAGGTGTCGCTGGATGGCCCGGTGCTGGCCTTCACCG CGGGACTGGCCGTGCTGACCACACTGCTGTTCGGGCTGGTGCCCGCGCTCCAGGCGGGGCGGCTGGACCTGGTTCGTGGG TTGAAGCGGGTGGTGGGCGGCGGGGGTGGCGGCGCGCAGGGGCACCGCACGCGCTCCGTGCTCGTCGTGGCGGAGACGGC GCTGGCGGTGCTGCTGCTGGTGTGCGCGGGGTTGTTGCTGCGCAGCTTCGTGCACCTGCAACGGGCCAAGCCCGGCTTCG ACCCCGAGGGCGTGCTGACGGTGAAGGTGGACCTGCCGCCGCTTCACTATGGCTTTGGCACCGCCGCGCCCGCGGCGTTC TATGACACGTTGCTCGAGCGGCTGCGGGCGCTGCCCGGCGTGGAGCAGGTTGGTGCCGTGAATGGGCTTCCACTGGATGG GGCCCGGTGGACCGTTCCCGTGAAGGACCCCATGCGGCCCGTTCCGGAGGGGACGGAGCCATGGCAGGCCAGCGTGCGCA TCGTGACGCCCGGGGCGCTGGAGGCCTTGCGCGTGAAGGTGCTTCAGGGCCGGGGAATCTCGGCGGCGGACCAGGGCGCG GGTGGGCGCGCGGTGCTGGTCAACGCGGCGGCGGCGCGCCGCTTCTGGCCTGGCGAAGAGCCCCTGGGGCGCACGCTGGA CACCGGCATGGACTGGGGCAGTGGTGCCATGGGTGGGCGCGTGGTGGGCGTGGTGGACGACGTGGCACTGGAAGGGCTTG GCGCGCCGTCCCTGCCGGAGGTGTACGTGCCCTACGTGCAGGCGCGGACCACGAGCATGGTGGTGCTGCTGCGGACGAAG GGGGCGCCGCTCGACCTGGCTCCCGCGGCTCGCGCGGAGATTCGTGCGTTGGATGCGAGCCTGGCGCCAGGCAGTGTCCG CACGCTGGCCTCGGTGGTTGACCGCACGGTGGCGCCGCTGCGCTTCTACCTGCTGCTGGCGGGGGCCTTCGCGGCGCTGG CGATGGTGCTGTCGGCGGTGGGCCTCTATGGCGTCGTGGCCTACGCGGTGCTCCAGCGCACCCGCGAGCTGGGCATCCGC ATGGCGCTGGGCGCGCGTCAGGCGCAGGTGCTGGGGCTGGTGCTCGGCCGCTACCTGGGGCTGACGGCGTGTGGGCTCCT CATTGGATTGGGGCTGGCGGTGGCCACCAGCCGCGGCCTCACGCACCTGCTGAGCGGCGTGCGGCCCACGGACCCACTGA CGTACGTGGCGGTGGCGGCGGTGCTGTTGGCGGTGGCCGTCCTGGCGGTGCTGCTGCCCGCGCGCCGGGCCGCACGAGTC TCCCCCGCGGTGGCGCTCCGGGCGGACTGA
Upstream 100 bases:
>100_bases ACTCCGATTCCCATTCCCGTGCAACCGGGCTTCTCGCTTCGTCCAGATGGCCTGTACGCCGGTGTGGCACGCGGCATGCT CGGGCGTCCTGGACATGACG
Downstream 100 bases:
>100_bases GCAGGCGTCCGGGGCCGCTGCGTTTCAACGGGGCGCGGCGGTCATCGTACCGCGAGGAGGGACGGACGAGCTTGGAGGTG CGTTCCAGGGGGCGGGTCGC
Product: putative permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 809; Mature: 808
Protein sequence:
>809_residues MTLGQDLRFALRRLRGSPTFTLVAVATLALGIGANVSIFSVVNAVLLRPLPMHDDARLVRMYSLRTQGPGPTSVLDFMDL REQSRTLKGLSAVAPVAVTLAADSADTLPEKVQAGMVTGDFFPMLGARVQLGRALHPDDVRPGAPKVAVISHALWQRRFG GSAAVLGRSVDLGAPEPWTVVGVMAPGFDFPARSELWSPLLWEEGMTKPEGRGAHWLEVYGRLGPDVALESARTELSAIA HRLAGQYPQTNEGKDARVEPLRDVLVGNVRPSLLLMLGAVGLVLLIACANLTHLLLARAASREGEVSVRIALGASRGRIA RELLVECGVLAGLGAAVGLLVAMWALDALATWGPQDIPRIEEVSLDGPVLAFTAGLAVLTTLLFGLVPALQAGRLDLVRG LKRVVGGGGGGAQGHRTRSVLVVAETALAVLLLVCAGLLLRSFVHLQRAKPGFDPEGVLTVKVDLPPLHYGFGTAAPAAF YDTLLERLRALPGVEQVGAVNGLPLDGARWTVPVKDPMRPVPEGTEPWQASVRIVTPGALEALRVKVLQGRGISAADQGA GGRAVLVNAAAARRFWPGEEPLGRTLDTGMDWGSGAMGGRVVGVVDDVALEGLGAPSLPEVYVPYVQARTTSMVVLLRTK GAPLDLAPAARAEIRALDASLAPGSVRTLASVVDRTVAPLRFYLLLAGAFAALAMVLSAVGLYGVVAYAVLQRTRELGIR MALGARQAQVLGLVLGRYLGLTACGLLIGLGLAVATSRGLTHLLSGVRPTDPLTYVAVAAVLLAVAVLAVLLPARRAARV SPAVALRAD
Sequences:
>Translated_809_residues MTLGQDLRFALRRLRGSPTFTLVAVATLALGIGANVSIFSVVNAVLLRPLPMHDDARLVRMYSLRTQGPGPTSVLDFMDL REQSRTLKGLSAVAPVAVTLAADSADTLPEKVQAGMVTGDFFPMLGARVQLGRALHPDDVRPGAPKVAVISHALWQRRFG GSAAVLGRSVDLGAPEPWTVVGVMAPGFDFPARSELWSPLLWEEGMTKPEGRGAHWLEVYGRLGPDVALESARTELSAIA HRLAGQYPQTNEGKDARVEPLRDVLVGNVRPSLLLMLGAVGLVLLIACANLTHLLLARAASREGEVSVRIALGASRGRIA RELLVECGVLAGLGAAVGLLVAMWALDALATWGPQDIPRIEEVSLDGPVLAFTAGLAVLTTLLFGLVPALQAGRLDLVRG LKRVVGGGGGGAQGHRTRSVLVVAETALAVLLLVCAGLLLRSFVHLQRAKPGFDPEGVLTVKVDLPPLHYGFGTAAPAAF YDTLLERLRALPGVEQVGAVNGLPLDGARWTVPVKDPMRPVPEGTEPWQASVRIVTPGALEALRVKVLQGRGISAADQGA GGRAVLVNAAAARRFWPGEEPLGRTLDTGMDWGSGAMGGRVVGVVDDVALEGLGAPSLPEVYVPYVQARTTSMVVLLRTK GAPLDLAPAARAEIRALDASLAPGSVRTLASVVDRTVAPLRFYLLLAGAFAALAMVLSAVGLYGVVAYAVLQRTRELGIR MALGARQAQVLGLVLGRYLGLTACGLLIGLGLAVATSRGLTHLLSGVRPTDPLTYVAVAAVLLAVAVLAVLLPARRAARV SPAVALRAD >Mature_808_residues TLGQDLRFALRRLRGSPTFTLVAVATLALGIGANVSIFSVVNAVLLRPLPMHDDARLVRMYSLRTQGPGPTSVLDFMDLR EQSRTLKGLSAVAPVAVTLAADSADTLPEKVQAGMVTGDFFPMLGARVQLGRALHPDDVRPGAPKVAVISHALWQRRFGG SAAVLGRSVDLGAPEPWTVVGVMAPGFDFPARSELWSPLLWEEGMTKPEGRGAHWLEVYGRLGPDVALESARTELSAIAH RLAGQYPQTNEGKDARVEPLRDVLVGNVRPSLLLMLGAVGLVLLIACANLTHLLLARAASREGEVSVRIALGASRGRIAR ELLVECGVLAGLGAAVGLLVAMWALDALATWGPQDIPRIEEVSLDGPVLAFTAGLAVLTTLLFGLVPALQAGRLDLVRGL KRVVGGGGGGAQGHRTRSVLVVAETALAVLLLVCAGLLLRSFVHLQRAKPGFDPEGVLTVKVDLPPLHYGFGTAAPAAFY DTLLERLRALPGVEQVGAVNGLPLDGARWTVPVKDPMRPVPEGTEPWQASVRIVTPGALEALRVKVLQGRGISAADQGAG GRAVLVNAAAARRFWPGEEPLGRTLDTGMDWGSGAMGGRVVGVVDDVALEGLGAPSLPEVYVPYVQARTTSMVVLLRTKG APLDLAPAARAEIRALDASLAPGSVRTLASVVDRTVAPLRFYLLLAGAFAALAMVLSAVGLYGVVAYAVLQRTRELGIRM ALGARQAQVLGLVLGRYLGLTACGLLIGLGLAVATSRGLTHLLSGVRPTDPLTYVAVAAVLLAVAVLAVLLPARRAARVS PAVALRAD
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 84632; Mature: 84501
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLGQDLRFALRRLRGSPTFTLVAVATLALGIGANVSIFSVVNAVLLRPLPMHDDARLVR CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHH MYSLRTQGPGPTSVLDFMDLREQSRTLKGLSAVAPVAVTLAADSADTLPEKVQAGMVTGD HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHCCCCCCC FFPMLGARVQLGRALHPDDVRPGAPKVAVISHALWQRRFGGSAAVLGRSVDLGAPEPWTV HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEE VGVMAPGFDFPARSELWSPLLWEEGMTKPEGRGAHWLEVYGRLGPDVALESARTELSAIA EEEECCCCCCCCHHHHCCCHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH HRLAGQYPQTNEGKDARVEPLRDVLVGNVRPSLLLMLGAVGLVLLIACANLTHLLLARAA HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SREGEVSVRIALGASRGRIARELLVECGVLAGLGAAVGLLVAMWALDALATWGPQDIPRI CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EEVSLDGPVLAFTAGLAVLTTLLFGLVPALQAGRLDLVRGLKRVVGGGGGGAQGHRTRSV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEE LVVAETALAVLLLVCAGLLLRSFVHLQRAKPGFDPEGVLTVKVDLPPLHYGFGTAAPAAF EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHH YDTLLERLRALPGVEQVGAVNGLPLDGARWTVPVKDPMRPVPEGTEPWQASVRIVTPGAL HHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCHH EALRVKVLQGRGISAADQGAGGRAVLVNAAAARRFWPGEEPLGRTLDTGMDWGSGAMGGR HHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCE VVGVVDDVALEGLGAPSLPEVYVPYVQARTTSMVVLLRTKGAPLDLAPAARAEIRALDAS EEEEHHHHHHHCCCCCCCCCHHHCHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCC LAPGSVRTLASVVDRTVAPLRFYLLLAGAFAALAMVLSAVGLYGVVAYAVLQRTRELGIR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH MALGARQAQVLGLVLGRYLGLTACGLLIGLGLAVATSRGLTHLLSGVRPTDPLTYVAVAA HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHH VLLAVAVLAVLLPARRAARVSPAVALRAD HHHHHHHHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure TLGQDLRFALRRLRGSPTFTLVAVATLALGIGANVSIFSVVNAVLLRPLPMHDDARLVR CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHH MYSLRTQGPGPTSVLDFMDLREQSRTLKGLSAVAPVAVTLAADSADTLPEKVQAGMVTGD HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHCCCCCCC FFPMLGARVQLGRALHPDDVRPGAPKVAVISHALWQRRFGGSAAVLGRSVDLGAPEPWTV HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEE VGVMAPGFDFPARSELWSPLLWEEGMTKPEGRGAHWLEVYGRLGPDVALESARTELSAIA EEEECCCCCCCCHHHHCCCHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH HRLAGQYPQTNEGKDARVEPLRDVLVGNVRPSLLLMLGAVGLVLLIACANLTHLLLARAA HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SREGEVSVRIALGASRGRIARELLVECGVLAGLGAAVGLLVAMWALDALATWGPQDIPRI CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EEVSLDGPVLAFTAGLAVLTTLLFGLVPALQAGRLDLVRGLKRVVGGGGGGAQGHRTRSV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEE LVVAETALAVLLLVCAGLLLRSFVHLQRAKPGFDPEGVLTVKVDLPPLHYGFGTAAPAAF EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHH YDTLLERLRALPGVEQVGAVNGLPLDGARWTVPVKDPMRPVPEGTEPWQASVRIVTPGAL HHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCHH EALRVKVLQGRGISAADQGAGGRAVLVNAAAARRFWPGEEPLGRTLDTGMDWGSGAMGGR HHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCE VVGVVDDVALEGLGAPSLPEVYVPYVQARTTSMVVLLRTKGAPLDLAPAARAEIRALDAS EEEEHHHHHHHCCCCCCCCCHHHCHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCC LAPGSVRTLASVVDRTVAPLRFYLLLAGAFAALAMVLSAVGLYGVVAYAVLQRTRELGIR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH MALGARQAQVLGLVLGRYLGLTACGLLIGLGLAVATSRGLTHLLSGVRPTDPLTYVAVAA HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHH VLLAVAVLAVLLPARRAARVSPAVALRAD HHHHHHHHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]