| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is frgB [H]
Identifier: 108763723
GI number: 108763723
Start: 1313908
End: 1315440
Strand: Reverse
Name: frgB [H]
Synonym: MXAN_1129
Alternate gene names: 108763723
Gene position: 1315440-1313908 (Counterclockwise)
Preceding gene: 108759361
Following gene: 108758269
Centisome position: 14.39
GC content: 72.08
Gene sequence:
>1533_bases ATGACGGGTGGGATGTGGATCAGCCTCCTGGCCTGCGCGGGCCAGCTCGCCTTGGCGGGCCTTGCCCTGGTGCGCGTGGG CAAGAGTCCGTTGGCGCTGCCGCTGTCGCTGCTGTCCATCGCCCTGTCGACGTGGAACTTCTCCGGCTTCGCGCTGGTGC GCGCGGACGAGGACGGCTGGCGGCTGGTGGGCTTCACCGCGGGCTTGATGACGGTGCCGTGCGCGCTGCACTTCATCCTG TCCTTCGTGGGACGGCGACGAAGCCTCGCCTGGGCCATGTACGGGGCCTATGCCCTCTTCGGCGCGTTGGCGCTCGCCAT GCTGGTGGCGTTGGGCGCCCCCACGCTGGAGGCGCACCTGCTCACGCTGCGCTTCGGGCTGCTCGTCTCCGCGCTGGCCA TTCCCATCCTCGGTGGAGGCTTCGCGCTCCTGGGATTCCACGTGCTGCACTCGCGACACCCGGACGAGCGCGCCCGCGCG GGCCTGGTGCTGTTGGGGCTCACGCTGGTGGTGGCCCTGCTGATGACGGAGCTGGCGGCGGAGCTGGGCCTGGAGGTGGT GCGGCTCGGCCACGTGGGCACGCTCCTGGGCTTGCCGGTGATGGCCACCGCGGCGCTGCGCTTCGGCCTCTTCGGAGACG ACCCGGGTGCGCCCCGGCTCGCGCTGCACGCGGCGGGCATCGCGGGGCTGGGGGTGCTGGCCTATCTCGCCGTGGTGCGG CTCTTCGTCGCGCAGGCGGGCACGCTCATCATCTGCACCACGGCGGTGACGTTCGCCCTGGTGGCGGCGACCCGCCGGGG CGTCACCGCCTACGTCAGCCGAAGCGAGCGACTGGAGCGGCTCGCCACGCTGGGCCGCTTCTCCGCGCAGATGGCGCACG ACCTCAAGAACCCCATCGCCGCGATGAAGGGCGCCGCGCAGTACCTCAAGGAGGAGCACGCGCGCGGGCGTTCGTGGGAC GGGCAAGGCGAGTTCCTGGACCTGCTGCTGGAGCAGGTGGAGCGCCTGGACCGGGTGGTGGACACGTATCAGCGGCTGGC GCGCGTGGAGCCCCTGCCAAAGCCGGTGGACCTGCGCCGGCTGGTGGAGGGCGTGCTGTCGCTCCAGGTCTTCGCCAGCC CGGGCAAGGTCGTCATCATCCGGGAGCTGGCCGCCGGCCTGCCCCCCTGCGCGGGGGACCAGGACCTGCTGGCCAACGCC CTGGAGAACCTGGTGCGCAACGCCTGCGAAGCAATGCCGGGAGGTGGCACCCTCACCGTGCGCGCGCTGCGTGACGGTGC CGACGTGGCCATGGAGGTAGAGGACACCGGCGAGGGCATGGACGCTCGAACACGCGAGCGTGCCTTCGACGACTTCTTCA CCACCAAGGCCTCGGGCAGCGGCCTGGGGCTGGCCTTCGTCCGGCGCGTGGTGGAAGCGCATGGCGGCGAGGTGCTCCTG ACAAGCCGGGAGGGGCGCGGTACGGTGGTCCGGATGCGCCTGCCCGTCACGGACGCGAGCCTGGGCGGCGCAGGCGTGGG AGAAGCCGCGTGA
Upstream 100 bases:
>100_bases CGAGCGTGAACAGGCGGTGCGCCGCTGGGAGTCCGCGGCGGTGGAGCCGGCCAACGCGCGTCGGCTGGGCATGCTCTAGT CCCCTGCATCGGAGCGCCCC
Downstream 100 bases:
>100_bases ACGAATCATTGAGAGGCACGGTGCTGCTGGTCGACGACGACCCCGCCGTGGCCAAGGTGCTGGGCGCCCTGCTGACGCAG GCGGGCCTGACGACGCATGC
Product: sensor histidine kinase FrgB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MTGGMWISLLACAGQLALAGLALVRVGKSPLALPLSLLSIALSTWNFSGFALVRADEDGWRLVGFTAGLMTVPCALHFIL SFVGRRRSLAWAMYGAYALFGALALAMLVALGAPTLEAHLLTLRFGLLVSALAIPILGGGFALLGFHVLHSRHPDERARA GLVLLGLTLVVALLMTELAAELGLEVVRLGHVGTLLGLPVMATAALRFGLFGDDPGAPRLALHAAGIAGLGVLAYLAVVR LFVAQAGTLIICTTAVTFALVAATRRGVTAYVSRSERLERLATLGRFSAQMAHDLKNPIAAMKGAAQYLKEEHARGRSWD GQGEFLDLLLEQVERLDRVVDTYQRLARVEPLPKPVDLRRLVEGVLSLQVFASPGKVVIIRELAAGLPPCAGDQDLLANA LENLVRNACEAMPGGGTLTVRALRDGADVAMEVEDTGEGMDARTRERAFDDFFTTKASGSGLGLAFVRRVVEAHGGEVLL TSREGRGTVVRMRLPVTDASLGGAGVGEAA
Sequences:
>Translated_510_residues MTGGMWISLLACAGQLALAGLALVRVGKSPLALPLSLLSIALSTWNFSGFALVRADEDGWRLVGFTAGLMTVPCALHFIL SFVGRRRSLAWAMYGAYALFGALALAMLVALGAPTLEAHLLTLRFGLLVSALAIPILGGGFALLGFHVLHSRHPDERARA GLVLLGLTLVVALLMTELAAELGLEVVRLGHVGTLLGLPVMATAALRFGLFGDDPGAPRLALHAAGIAGLGVLAYLAVVR LFVAQAGTLIICTTAVTFALVAATRRGVTAYVSRSERLERLATLGRFSAQMAHDLKNPIAAMKGAAQYLKEEHARGRSWD GQGEFLDLLLEQVERLDRVVDTYQRLARVEPLPKPVDLRRLVEGVLSLQVFASPGKVVIIRELAAGLPPCAGDQDLLANA LENLVRNACEAMPGGGTLTVRALRDGADVAMEVEDTGEGMDARTRERAFDDFFTTKASGSGLGLAFVRRVVEAHGGEVLL TSREGRGTVVRMRLPVTDASLGGAGVGEAA >Mature_509_residues TGGMWISLLACAGQLALAGLALVRVGKSPLALPLSLLSIALSTWNFSGFALVRADEDGWRLVGFTAGLMTVPCALHFILS FVGRRRSLAWAMYGAYALFGALALAMLVALGAPTLEAHLLTLRFGLLVSALAIPILGGGFALLGFHVLHSRHPDERARAG LVLLGLTLVVALLMTELAAELGLEVVRLGHVGTLLGLPVMATAALRFGLFGDDPGAPRLALHAAGIAGLGVLAYLAVVRL FVAQAGTLIICTTAVTFALVAATRRGVTAYVSRSERLERLATLGRFSAQMAHDLKNPIAAMKGAAQYLKEEHARGRSWDG QGEFLDLLLEQVERLDRVVDTYQRLARVEPLPKPVDLRRLVEGVLSLQVFASPGKVVIIRELAAGLPPCAGDQDLLANAL ENLVRNACEAMPGGGTLTVRALRDGADVAMEVEDTGEGMDARTRERAFDDFFTTKASGSGLGLAFVRRVVEAHGGEVLLT SREGRGTVVRMRLPVTDASLGGAGVGEAA
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=225, Percent_Identity=35.5555555555556, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI1788549, Length=227, Percent_Identity=33.4801762114537, Blast_Score=125, Evalue=8e-30, Organism=Escherichia coli, GI1790300, Length=218, Percent_Identity=29.3577981651376, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1790861, Length=238, Percent_Identity=31.0924369747899, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1786600, Length=220, Percent_Identity=27.7272727272727, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1786783, Length=235, Percent_Identity=31.063829787234, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI87082128, Length=237, Percent_Identity=26.1603375527426, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI87081816, Length=218, Percent_Identity=28.8990825688073, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788393, Length=240, Percent_Identity=27.5, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53771; Mature: 53640
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGMWISLLACAGQLALAGLALVRVGKSPLALPLSLLSIALSTWNFSGFALVRADEDGW CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC RLVGFTAGLMTVPCALHFILSFVGRRRSLAWAMYGAYALFGALALAMLVALGAPTLEAHL EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LTLRFGLLVSALAIPILGGGFALLGFHVLHSRHPDERARAGLVLLGLTLVVALLMTELAA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELGLEVVRLGHVGTLLGLPVMATAALRFGLFGDDPGAPRLALHAAGIAGLGVLAYLAVVR HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHH LFVAQAGTLIICTTAVTFALVAATRRGVTAYVSRSERLERLATLGRFSAQMAHDLKNPIA HHHHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMKGAAQYLKEEHARGRSWDGQGEFLDLLLEQVERLDRVVDTYQRLARVEPLPKPVDLRR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LVEGVLSLQVFASPGKVVIIRELAAGLPPCAGDQDLLANALENLVRNACEAMPGGGTLTV HHHHHHHHHHEECCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE RALRDGADVAMEVEDTGEGMDARTRERAFDDFFTTKASGSGLGLAFVRRVVEAHGGEVLL EEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEE TSREGRGTVVRMRLPVTDASLGGAGVGEAA EECCCCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TGGMWISLLACAGQLALAGLALVRVGKSPLALPLSLLSIALSTWNFSGFALVRADEDGW CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC RLVGFTAGLMTVPCALHFILSFVGRRRSLAWAMYGAYALFGALALAMLVALGAPTLEAHL EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LTLRFGLLVSALAIPILGGGFALLGFHVLHSRHPDERARAGLVLLGLTLVVALLMTELAA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELGLEVVRLGHVGTLLGLPVMATAALRFGLFGDDPGAPRLALHAAGIAGLGVLAYLAVVR HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHH LFVAQAGTLIICTTAVTFALVAATRRGVTAYVSRSERLERLATLGRFSAQMAHDLKNPIA HHHHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMKGAAQYLKEEHARGRSWDGQGEFLDLLLEQVERLDRVVDTYQRLARVEPLPKPVDLRR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LVEGVLSLQVFASPGKVVIIRELAAGLPPCAGDQDLLANALENLVRNACEAMPGGGTLTV HHHHHHHHHHEECCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE RALRDGADVAMEVEDTGEGMDARTRERAFDDFFTTKASGSGLGLAFVRRVVEAHGGEVLL EEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEE TSREGRGTVVRMRLPVTDASLGGAGVGEAA EECCCCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]