| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is argH [H]
Identifier: 108763718
GI number: 108763718
Start: 6380844
End: 6382193
Strand: Direct
Name: argH [H]
Synonym: MXAN_5107
Alternate gene names: 108763718
Gene position: 6380844-6382193 (Clockwise)
Preceding gene: 108759253
Following gene: 108757976
Centisome position: 69.81
GC content: 72.44
Gene sequence:
>1350_bases GTGGCTGACACGCTGTGGGGCAAGGGCCTTCCCCTGGACGCGGCCATCCATCGATTCACGGTGGGCAACGACCCGGTGGT GGACTTGGCGCTGGCGCCGCATGACGCGCTCGGCTCGGCCGCGCACGCGCGGATGCTGGCGCGCGTGGGCCTGCTGAAGG ACGCGGAGGCCAAGTCCCTGGTGACGGCGCTCAAGGCGCTGCACGACGAGGCCCGCGCGGGCACGTTCGTCATCCGTCCC GAGCAGGAGGACGGCCACACCGCCCTGGAGGCGGCGCTGGTGGAGCGCGTGGGCGAGCCGGGCAAGCGCATCCACCTGGG GCGTTCTCGCAACGACCAGGTGCAGTTGGCCCTGCGCCTGCTGCTGCGTGAAGAAGTGCTCACGCTGGGCGCGCGGGCGG CGGAGCTGGCGGGGGCCTTCCTGGACTTCGCGCAGGCGCACAAGGACGTGGCGCTGCCGGGCTACACGCACCTGCGCCGG GCCATGCCTTCCACCTTCGGTCTGTGGGGCATGGCGTTCGCGGAAGGGCTGCTGGAGGAACTCGAGGCGCTGCGCGGCGT GTGGGCTCGGCTGGACCGCTGCCCGCTGGGCGCGGCGGCGGGCTTCGGCGTGCCGCTGCCCATCGACCGGGAGTACGTGG CGGCGCTGCTGGGTTTCTCGCGCGTGCAGCGCAGCCCCATCGACGTGCAGAACGGACGCGGCCGTCACGAGTCCGCGGTG CTGGGCTGGGCCTGCTCGGTGGCGGGCACGCTGGAGAAGTGGCTGTGGGACGTGCAGCTCTACAGCATGGACGAGTTCGG CTTCCTCGGACTGCCGGACGCGTACACCACGGGCTCGTCCATCATGCCGCAGAAGAAGAACCCGGACGTCGTGGAGCTGG CCCGGGGCCGCTGCCGCGAGCTGCGCGGACTGGCGCATCAGGTGGAGGCCGTCGCGGGCGGACTGCCCTCCAGCTACCAC CGCGACTTCCAACTGCTGAAGTCCCCCACCCTGACGGCGCTGGGCTCCACGCGGGAGCTGCTGGACGTGCTCACCCGGTT GGTGCCCGCGCTCCAGGTGAAGGCGGACGCGGCGGCGCGTGCCAGCGACGACACGCTGTACGCGGCGCACCATGCCTATG CGCTGGTGGCCCAGGGACAGGCCTTCCGTGACGCCTACAAGCAGGTGGGCCGCGAGCTGGTGGAAGGAACGTTCCGTCCA GACCGCGGCGCCCTGACGGCCACCCACCTGGGTGGCGCCGGCAACCTGGGCCTGCCCCAGGCCCGGGAAGAGCTGGCCGC CTCGCGCGCCTGGCTCGATGAGACGCACCGCCTGGTGGCCGATGCCGCCGGGCGCGTCTGGACGGTTTGA
Upstream 100 bases:
>100_bases CGCAGCCACCTGGCGGACGAATTCATCACCCGGGCGGAGCTGGAAGCCGGCGCCGCCTTCTACACGCAACTGGTTCGGGG TTACTTCGAGGAGGCGGCTC
Downstream 100 bases:
>100_bases ACCGCATCCCCGCGAGGAGCGAATCATGAGCAACAAGAAGAACGTGGTGCTGGCCTTCTCCGGCGGACTCGATACCGCTT TCTGTGCCGTCTACCTGCGA
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase [H]
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MADTLWGKGLPLDAAIHRFTVGNDPVVDLALAPHDALGSAAHARMLARVGLLKDAEAKSLVTALKALHDEARAGTFVIRP EQEDGHTALEAALVERVGEPGKRIHLGRSRNDQVQLALRLLLREEVLTLGARAAELAGAFLDFAQAHKDVALPGYTHLRR AMPSTFGLWGMAFAEGLLEELEALRGVWARLDRCPLGAAAGFGVPLPIDREYVAALLGFSRVQRSPIDVQNGRGRHESAV LGWACSVAGTLEKWLWDVQLYSMDEFGFLGLPDAYTTGSSIMPQKKNPDVVELARGRCRELRGLAHQVEAVAGGLPSSYH RDFQLLKSPTLTALGSTRELLDVLTRLVPALQVKADAAARASDDTLYAAHHAYALVAQGQAFRDAYKQVGRELVEGTFRP DRGALTATHLGGAGNLGLPQAREELAASRAWLDETHRLVADAAGRVWTV
Sequences:
>Translated_449_residues MADTLWGKGLPLDAAIHRFTVGNDPVVDLALAPHDALGSAAHARMLARVGLLKDAEAKSLVTALKALHDEARAGTFVIRP EQEDGHTALEAALVERVGEPGKRIHLGRSRNDQVQLALRLLLREEVLTLGARAAELAGAFLDFAQAHKDVALPGYTHLRR AMPSTFGLWGMAFAEGLLEELEALRGVWARLDRCPLGAAAGFGVPLPIDREYVAALLGFSRVQRSPIDVQNGRGRHESAV LGWACSVAGTLEKWLWDVQLYSMDEFGFLGLPDAYTTGSSIMPQKKNPDVVELARGRCRELRGLAHQVEAVAGGLPSSYH RDFQLLKSPTLTALGSTRELLDVLTRLVPALQVKADAAARASDDTLYAAHHAYALVAQGQAFRDAYKQVGRELVEGTFRP DRGALTATHLGGAGNLGLPQAREELAASRAWLDETHRLVADAAGRVWTV >Mature_448_residues ADTLWGKGLPLDAAIHRFTVGNDPVVDLALAPHDALGSAAHARMLARVGLLKDAEAKSLVTALKALHDEARAGTFVIRPE QEDGHTALEAALVERVGEPGKRIHLGRSRNDQVQLALRLLLREEVLTLGARAAELAGAFLDFAQAHKDVALPGYTHLRRA MPSTFGLWGMAFAEGLLEELEALRGVWARLDRCPLGAAAGFGVPLPIDREYVAALLGFSRVQRSPIDVQNGRGRHESAVL GWACSVAGTLEKWLWDVQLYSMDEFGFLGLPDAYTTGSSIMPQKKNPDVVELARGRCRELRGLAHQVEAVAGGLPSSYHR DFQLLKSPTLTALGSTRELLDVLTRLVPALQVKADAAARASDDTLYAAHHAYALVAQGQAFRDAYKQVGRELVEGTFRPD RGALTATHLGGAGNLGLPQAREELAASRAWLDETHRLVADAAGRVWTV
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=383, Percent_Identity=36.0313315926893, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI68303542, Length=383, Percent_Identity=36.0313315926893, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI68303547, Length=383, Percent_Identity=35.7702349869452, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI68303549, Length=383, Percent_Identity=34.2036553524804, Blast_Score=196, Evalue=5e-50, Organism=Escherichia coli, GI1790398, Length=399, Percent_Identity=37.0927318295739, Blast_Score=220, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6321806, Length=384, Percent_Identity=33.0729166666667, Blast_Score=184, Evalue=2e-47, Organism=Drosophila melanogaster, GI221473854, Length=386, Percent_Identity=35.2331606217617, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI78706858, Length=386, Percent_Identity=35.2331606217617, Blast_Score=200, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 48467; Mature: 48336
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTLWGKGLPLDAAIHRFTVGNDPVVDLALAPHDALGSAAHARMLARVGLLKDAEAKSL CCCCCCCCCCCHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHH VTALKALHDEARAGTFVIRPEQEDGHTALEAALVERVGEPGKRIHLGRSRNDQVQLALRL HHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHH LLREEVLTLGARAAELAGAFLDFAQAHKDVALPGYTHLRRAMPSTFGLWGMAFAEGLLEE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH LEALRGVWARLDRCPLGAAAGFGVPLPIDREYVAALLGFSRVQRSPIDVQNGRGRHESAV HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH LGWACSVAGTLEKWLWDVQLYSMDEFGFLGLPDAYTTGSSIMPQKKNPDVVELARGRCRE HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LRGLAHQVEAVAGGLPSSYHRDFQLLKSPTLTALGSTRELLDVLTRLVPALQVKADAAAR HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC ASDDTLYAAHHAYALVAQGQAFRDAYKQVGRELVEGTFRPDRGALTATHLGGAGNLGLPQ CCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCH AREELAASRAWLDETHRLVADAAGRVWTV HHHHHHHHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure ADTLWGKGLPLDAAIHRFTVGNDPVVDLALAPHDALGSAAHARMLARVGLLKDAEAKSL CCCCCCCCCCHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHH VTALKALHDEARAGTFVIRPEQEDGHTALEAALVERVGEPGKRIHLGRSRNDQVQLALRL HHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHH LLREEVLTLGARAAELAGAFLDFAQAHKDVALPGYTHLRRAMPSTFGLWGMAFAEGLLEE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH LEALRGVWARLDRCPLGAAAGFGVPLPIDREYVAALLGFSRVQRSPIDVQNGRGRHESAV HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH LGWACSVAGTLEKWLWDVQLYSMDEFGFLGLPDAYTTGSSIMPQKKNPDVVELARGRCRE HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LRGLAHQVEAVAGGLPSSYHRDFQLLKSPTLTALGSTRELLDVLTRLVPALQVKADAAAR HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC ASDDTLYAAHHAYALVAQGQAFRDAYKQVGRELVEGTFRPDRGALTATHLGGAGNLGLPQ CCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCH AREELAASRAWLDETHRLVADAAGRVWTV HHHHHHHHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA