| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is recG [H]
Identifier: 108763623
GI number: 108763623
Start: 3958613
End: 3960622
Strand: Direct
Name: recG [H]
Synonym: MXAN_3406
Alternate gene names: 108763623
Gene position: 3958613-3960622 (Clockwise)
Preceding gene: 108763574
Following gene: 108762574
Centisome position: 43.31
GC content: 69.7
Gene sequence:
>2010_bases ATGGGCGACATCCTCTTCATGCTGCCGCGCTGCTACGAGGACCGCCGCCAGTTGCGCACCATCGCCGAACTGGAGCCCGG CGAGCGAGGCGTCACGGTGGGCATCGTCAAGGTGGCCGACTTCGTGCCGGGCCGTCAGGGCCGGCGCATGTTCCGCGCCG TCGTGGGGGACCGCTCGGGCAGCATCGCCGCCACGTACTTCAACGCGGGCCCCTGGTTGAAGAGCCGGTTCACCGTGGGC AAGCGCATCGTCCTCTCCGGCGAGGTCCGCGCCACCATGTCGGGCCGGGAGATGCCCCATCCGGAAATCGAACCGGCGGA GGACATCGAGTCCACGACGTCGGTCCACTTCAACCGCATCGTCCCCGTGTATCCGGGCTTCGAGCGCGGCGAGCAGCGCT CGTTCCGCGAGCTGACCTCCCGCGTGGGCGAGCAGTACGCGCACGAACTGGATGACCCGCTGCCCGCCGACCTGCGCCGC CGCTTGGACCTGATGGGCCTGCCGGACGCGCTGCGCTTCATCCACTTCCCGCCAGGGGACGCGGACCTGGAGGCGCTCGA TGCGCACCAGAGCCCCGCGCACCGGCGGCTCGCCTTCGACGAGCTGTTCTTCCTCCAACTGGGCATGGCGCTCAAGCGGC AGGGCGTGAAGGCGGAGGTCGGCATCTCCTTCGACGTGTCCGAGCCCCGGCTGGCGAAGGCGCGCAACGCGCTGCCGTTC CAGCTCACCGGCGCGCAGGCGCGGGTGGTGGAGGAGCTCTGCTGGGACATGGCGCGCCCGGAGCCCATGAACCGGCTGGT CCAGGGAGACGTGGGCAGCGGCAAGACGGCGGTGGCCATGGTCTCCGCCCTCATCGCGCTGCAGGCCGGCTACCAGGTGG CCGTCATGGCGCCCACGGAAATCCTCGCTGAGCAGCACGAGCGCAACTTCCGCAAGGTGATGGAGCCGCTGGGCTACCGC GTGGGCCTGGTGAGCGCGGCGGGCACGGCGAAGGCCAAGCGCCAGGTGCGCGAGGCCGTGGCCCGAGGCGAAGTTCATCT GGCCGTGGGCACGCACGCGCTCCTTCAGGCAGACGTCTCTTTCGACCGCCTGGGCCTGGTCGTCATCGACGAACAGCACC GCTTCGGCGTGCTCCAGCGCCACACGCTGATGAGCAAGGGGCCCAAGCCGGATGTGCTGGTGATGACGGCCACGCCCATT CCCCGCACGCTGGCCATGACGCTGTACGGCGACCTGGACTTGTCCGTCATCGACCAGCTTCCGCCGGGCCGCACGCCCAT TCAGACGCGGGTGTTCAACGACAAGCAGCGCGCGCTCGTCTATGAGTCCGTGGGCGCGCAACTGGCCAAGGGGCACCAGG CCTACGTCGTCTACCCGCTGGTGGAGGAGTCGGAGAAGCTGGACCTGGAGGACGCCACGCGCGGCGTGGAGAAGCTCCGG AAGGTGTTCCCCGACGCGAAGGTGGGGCTGCTGCACGGACGGATGAAGGCGGAGGAGAAGGACTCCGTCATGGAGGACTT CCGCGAGAAGCGCCTGCACCTGCTCGTCTGCACCACGGTGGTGGAGGTGGGCGTGGACGTGCCCAACGCCTCCGTGATGG TGGTGGAATCCGCCGAGCGCTTCGGCCTGTCACAGCTTCACCAGCTCCGGGGCCGGGTGGGGCGCGGCGCGGCGGCGAGT TTCTGCCACCTGGTGGCCGGAAGCGCCCGCTCCTGGGAGTCCGCCGAGCGCCTGACGGTGATGGAGCAGAGCAGCGACGG CTTCGTCATCGCGGAGAAGGACCTGGAGATTCGAGGCCCGGGTGAATTCCTGGGCACGCGCCAGAGTGGCCTGCCCGAGC TCGCGGTGGCCAACCTGGCGCGGGATGGCGACCTGCTCTCCATGGCGCAGTCCGAGGCCCGGCGCATCCTGGAGAAGGAC CCGGACATGAAGGCGAAGGAGAACCAGGGCCTCGTGAAGGCGCTCGAGGAACGCTGGGAAGGGCGGCTCGCGCTCGCACG GGTGGGGTAG
Upstream 100 bases:
>100_bases CGCGCCGCGCTCCGGGCCGCTGGCGTCGCCGCTGAAGACGCTGGGCAAGCGGCTGGGACCCAGGCTCGTCTCGGCGCTCG ACAAGAAGGGGCTGCGCCGC
Downstream 100 bases:
>100_bases GGCGCCTGCCATGATTAGGCTAGGGGCATGGGTGACTGGGGAAGGGCCGACTACCTGTCGCGGCACGGCATCAAGGACGC GCGAGTCCTGGAGGCCATCG
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 669; Mature: 668
Protein sequence:
>669_residues MGDILFMLPRCYEDRRQLRTIAELEPGERGVTVGIVKVADFVPGRQGRRMFRAVVGDRSGSIAATYFNAGPWLKSRFTVG KRIVLSGEVRATMSGREMPHPEIEPAEDIESTTSVHFNRIVPVYPGFERGEQRSFRELTSRVGEQYAHELDDPLPADLRR RLDLMGLPDALRFIHFPPGDADLEALDAHQSPAHRRLAFDELFFLQLGMALKRQGVKAEVGISFDVSEPRLAKARNALPF QLTGAQARVVEELCWDMARPEPMNRLVQGDVGSGKTAVAMVSALIALQAGYQVAVMAPTEILAEQHERNFRKVMEPLGYR VGLVSAAGTAKAKRQVREAVARGEVHLAVGTHALLQADVSFDRLGLVVIDEQHRFGVLQRHTLMSKGPKPDVLVMTATPI PRTLAMTLYGDLDLSVIDQLPPGRTPIQTRVFNDKQRALVYESVGAQLAKGHQAYVVYPLVEESEKLDLEDATRGVEKLR KVFPDAKVGLLHGRMKAEEKDSVMEDFREKRLHLLVCTTVVEVGVDVPNASVMVVESAERFGLSQLHQLRGRVGRGAAAS FCHLVAGSARSWESAERLTVMEQSSDGFVIAEKDLEIRGPGEFLGTRQSGLPELAVANLARDGDLLSMAQSEARRILEKD PDMKAKENQGLVKALEERWEGRLALARVG
Sequences:
>Translated_669_residues MGDILFMLPRCYEDRRQLRTIAELEPGERGVTVGIVKVADFVPGRQGRRMFRAVVGDRSGSIAATYFNAGPWLKSRFTVG KRIVLSGEVRATMSGREMPHPEIEPAEDIESTTSVHFNRIVPVYPGFERGEQRSFRELTSRVGEQYAHELDDPLPADLRR RLDLMGLPDALRFIHFPPGDADLEALDAHQSPAHRRLAFDELFFLQLGMALKRQGVKAEVGISFDVSEPRLAKARNALPF QLTGAQARVVEELCWDMARPEPMNRLVQGDVGSGKTAVAMVSALIALQAGYQVAVMAPTEILAEQHERNFRKVMEPLGYR VGLVSAAGTAKAKRQVREAVARGEVHLAVGTHALLQADVSFDRLGLVVIDEQHRFGVLQRHTLMSKGPKPDVLVMTATPI PRTLAMTLYGDLDLSVIDQLPPGRTPIQTRVFNDKQRALVYESVGAQLAKGHQAYVVYPLVEESEKLDLEDATRGVEKLR KVFPDAKVGLLHGRMKAEEKDSVMEDFREKRLHLLVCTTVVEVGVDVPNASVMVVESAERFGLSQLHQLRGRVGRGAAAS FCHLVAGSARSWESAERLTVMEQSSDGFVIAEKDLEIRGPGEFLGTRQSGLPELAVANLARDGDLLSMAQSEARRILEKD PDMKAKENQGLVKALEERWEGRLALARVG >Mature_668_residues GDILFMLPRCYEDRRQLRTIAELEPGERGVTVGIVKVADFVPGRQGRRMFRAVVGDRSGSIAATYFNAGPWLKSRFTVGK RIVLSGEVRATMSGREMPHPEIEPAEDIESTTSVHFNRIVPVYPGFERGEQRSFRELTSRVGEQYAHELDDPLPADLRRR LDLMGLPDALRFIHFPPGDADLEALDAHQSPAHRRLAFDELFFLQLGMALKRQGVKAEVGISFDVSEPRLAKARNALPFQ LTGAQARVVEELCWDMARPEPMNRLVQGDVGSGKTAVAMVSALIALQAGYQVAVMAPTEILAEQHERNFRKVMEPLGYRV GLVSAAGTAKAKRQVREAVARGEVHLAVGTHALLQADVSFDRLGLVVIDEQHRFGVLQRHTLMSKGPKPDVLVMTATPIP RTLAMTLYGDLDLSVIDQLPPGRTPIQTRVFNDKQRALVYESVGAQLAKGHQAYVVYPLVEESEKLDLEDATRGVEKLRK VFPDAKVGLLHGRMKAEEKDSVMEDFREKRLHLLVCTTVVEVGVDVPNASVMVVESAERFGLSQLHQLRGRVGRGAAASF CHLVAGSARSWESAERLTVMEQSSDGFVIAEKDLEIRGPGEFLGTRQSGLPELAVANLARDGDLLSMAQSEARRILEKDP DMKAKENQGLVKALEERWEGRLALARVG
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=663, Percent_Identity=47.3604826546003, Blast_Score=524, Evalue=1e-150, Organism=Escherichia coli, GI1787357, Length=398, Percent_Identity=38.9447236180905, Blast_Score=293, Evalue=3e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 73999; Mature: 73868
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDILFMLPRCYEDRRQLRTIAELEPGERGVTVGIVKVADFVPGRQGRRMFRAVVGDRSG CCCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHCCCCC SIAATYFNAGPWLKSRFTVGKRIVLSGEVRATMSGREMPHPEIEPAEDIESTTSVHFNRI CEEEEEECCCCCHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHEEEEEE VPVYPGFERGEQRSFRELTSRVGEQYAHELDDPLPADLRRRLDLMGLPDALRFIHFPPGD EECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHEEECCCCC ADLEALDAHQSPAHRRLAFDELFFLQLGMALKRQGVKAEVGISFDVSEPRLAKARNALPF CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHCCCCCE QLTGAQARVVEELCWDMARPEPMNRLVQGDVGSGKTAVAMVSALIALQAGYQVAVMAPTE EECCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHH ILAEQHERNFRKVMEPLGYRVGLVSAAGTAKAKRQVREAVARGEVHLAVGTHALLQADVS HHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCC FDRLGLVVIDEQHRFGVLQRHTLMSKGPKPDVLVMTATPIPRTLAMTLYGDLDLSVIDQL CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHCC PPGRTPIQTRVFNDKQRALVYESVGAQLAKGHQAYVVYPLVEESEKLDLEDATRGVEKLR CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH KVFPDAKVGLLHGRMKAEEKDSVMEDFREKRLHLLVCTTVVEVGVDVPNASVMVVESAER HHCCCCCEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHH FGLSQLHQLRGRVGRGAAASFCHLVAGSARSWESAERLTVMEQSSDGFVIAEKDLEIRGP CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHEEEEEECCCCEEEEECCEEECCC GEFLGTRQSGLPELAVANLARDGDLLSMAQSEARRILEKDPDMKAKENQGLVKALEERWE HHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC GRLALARVG CCEEEEECC >Mature Secondary Structure GDILFMLPRCYEDRRQLRTIAELEPGERGVTVGIVKVADFVPGRQGRRMFRAVVGDRSG CCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHCCCCC SIAATYFNAGPWLKSRFTVGKRIVLSGEVRATMSGREMPHPEIEPAEDIESTTSVHFNRI CEEEEEECCCCCHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHEEEEEE VPVYPGFERGEQRSFRELTSRVGEQYAHELDDPLPADLRRRLDLMGLPDALRFIHFPPGD EECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHEEECCCCC ADLEALDAHQSPAHRRLAFDELFFLQLGMALKRQGVKAEVGISFDVSEPRLAKARNALPF CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHCCCCCE QLTGAQARVVEELCWDMARPEPMNRLVQGDVGSGKTAVAMVSALIALQAGYQVAVMAPTE EECCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHH ILAEQHERNFRKVMEPLGYRVGLVSAAGTAKAKRQVREAVARGEVHLAVGTHALLQADVS HHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCC FDRLGLVVIDEQHRFGVLQRHTLMSKGPKPDVLVMTATPIPRTLAMTLYGDLDLSVIDQL CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHCC PPGRTPIQTRVFNDKQRALVYESVGAQLAKGHQAYVVYPLVEESEKLDLEDATRGVEKLR CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH KVFPDAKVGLLHGRMKAEEKDSVMEDFREKRLHLLVCTTVVEVGVDVPNASVMVVESAER HHCCCCCEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHH FGLSQLHQLRGRVGRGAAASFCHLVAGSARSWESAERLTVMEQSSDGFVIAEKDLEIRGP CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHEEEEEECCCCEEEEECCEEECCC GEFLGTRQSGLPELAVANLARDGDLLSMAQSEARRILEKDPDMKAKENQGLVKALEERWE HHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC GRLALARVG CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]