| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is actA [H]
Identifier: 108763553
GI number: 108763553
Start: 3762733
End: 3763761
Strand: Direct
Name: actA [H]
Synonym: MXAN_3213
Alternate gene names: 108763553
Gene position: 3762733-3763761 (Clockwise)
Preceding gene: 108761345
Following gene: 108762849
Centisome position: 41.17
GC content: 71.04
Gene sequence:
>1029_bases ATGGGGTTCGAGGCTGTAAATCCGGGGTGGGCCTCGAAAAGCGGCGGAGAAAAGTTCACGCGGGAAGGTGGAACGGTGGG TGTGCGAAGGAAGCGAGTGGGCAAGGCCGGACAGCCGCCCACCGTGCTCGTCGTCGAGCCACGAGCAGCAGACCTGGAGC GGACCCGGCTGCTCCTGGCGGAGGCCGGCTTCCGGGTGGTGCCCGTGACACGCTTCGACGCGGCGGTGCCGCTCTTCGAG GTCATCCGCCCGGCCGCGGTGTTGCTGGCCGCGCAGGCGCCTGACTTCGCGGCCGTCCAGGTCGCGCGCCGGTTGCGGCA GCTCAGCCATGGCGCGGTGCCGCTGCTCTACCTGGTGGATGAGCGGGACGCCGAGGCCCGGCGGTACTGCCTGGAGCGGG GGCAGTGCGTGGACCTGGTGCCCCGTTCGGGCAGTGGCTCGGAGCTGGCGACGAAGCTTCACGCGCAACTGAAGCTGAAG GACGCGGTGCTGCGGGCGGCCGCGGGGGAGGAGGCCGGCACGGCCCAGGCGCTGCATGACCCGGTGACGGGGCTCTACAA CCGGCCCTTCCTGCTGGAGTTCATCAGCCTGGAGGCGCGGCGGGCGGAGCGCTACGGCGGCGGATTCTCCGTGGTGGCGG CGGAAGTGGGGGGCTGGTCGGCCTTTCGCAAGGAGTTTGGGCGCGGCATGGCGGAGCGTCTGCTGGTGTACAGCGCGGTG GTGTTGGGGCAGACGGTGCGCGACGCGGACGCGGTGGCACGGGTGGGGGACTGTCAATTCGCGCTGATGCTCCCGGGAAC GCCCGCGGAGTCGGTTCCGGAGGTGGTATCCCGCGTGGCGGCGCGCTTCGACACGGCCCGCTTCCAGGTGGAGGGGAAGG TGGTGCGCACGTCGCTGGAGCTGGGAACGGTGAGCTTCCCGGATTCGGTGGGCACGCCCACGCAGCTGTTGAGCGCGGCG CAGCAGGACATGCGACGCGCGCGTGAGTTTCGCCGGATGGTCGGGAGCACGTCCCGGTTGTCGGTGTGA
Upstream 100 bases:
>100_bases GCATGAGGTCAAAGGTGGCACAACCATTGCTAAATCCGCTGCCCAGCATGGGTAGCCAGCTTCCCTTCTCTAGTAAATCC GAGGGGATGAGGAAGTCAGG
Downstream 100 bases:
>100_bases GGGTGGGTCGGACTTCGATGCAGCGGGCGAGTGGAGGCGAGGGGATGGACCGGATCGCGGTGCTGGTGGTGGATGACGAA GAGGCGGTGCGCACGTTTCT
Product: C-signal regulator ActA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MGFEAVNPGWASKSGGEKFTREGGTVGVRRKRVGKAGQPPTVLVVEPRAADLERTRLLLAEAGFRVVPVTRFDAAVPLFE VIRPAAVLLAAQAPDFAAVQVARRLRQLSHGAVPLLYLVDERDAEARRYCLERGQCVDLVPRSGSGSELATKLHAQLKLK DAVLRAAAGEEAGTAQALHDPVTGLYNRPFLLEFISLEARRAERYGGGFSVVAAEVGGWSAFRKEFGRGMAERLLVYSAV VLGQTVRDADAVARVGDCQFALMLPGTPAESVPEVVSRVAARFDTARFQVEGKVVRTSLELGTVSFPDSVGTPTQLLSAA QQDMRRAREFRRMVGSTSRLSV
Sequences:
>Translated_342_residues MGFEAVNPGWASKSGGEKFTREGGTVGVRRKRVGKAGQPPTVLVVEPRAADLERTRLLLAEAGFRVVPVTRFDAAVPLFE VIRPAAVLLAAQAPDFAAVQVARRLRQLSHGAVPLLYLVDERDAEARRYCLERGQCVDLVPRSGSGSELATKLHAQLKLK DAVLRAAAGEEAGTAQALHDPVTGLYNRPFLLEFISLEARRAERYGGGFSVVAAEVGGWSAFRKEFGRGMAERLLVYSAV VLGQTVRDADAVARVGDCQFALMLPGTPAESVPEVVSRVAARFDTARFQVEGKVVRTSLELGTVSFPDSVGTPTQLLSAA QQDMRRAREFRRMVGSTSRLSV >Mature_341_residues GFEAVNPGWASKSGGEKFTREGGTVGVRRKRVGKAGQPPTVLVVEPRAADLERTRLLLAEAGFRVVPVTRFDAAVPLFEV IRPAAVLLAAQAPDFAAVQVARRLRQLSHGAVPLLYLVDERDAEARRYCLERGQCVDLVPRSGSGSELATKLHAQLKLKD AVLRAAAGEEAGTAQALHDPVTGLYNRPFLLEFISLEARRAERYGGGFSVVAAEVGGWSAFRKEFGRGMAERLLVYSAVV LGQTVRDADAVARVGDCQFALMLPGTPAESVPEVVSRVAARFDTARFQVEGKVVRTSLELGTVSFPDSVGTPTQLLSAAQ QDMRRAREFRRMVGSTSRLSV
Specific function: Unknown
COG id: COG3706
COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GGDEF domain [H]
Homologues:
Organism=Escherichia coli, GI87082007, Length=131, Percent_Identity=29.0076335877863, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 [H]
Pfam domain/function: PF00990 GGDEF [H]
EC number: NA
Molecular weight: Translated: 36915; Mature: 36784
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFEAVNPGWASKSGGEKFTREGGTVGVRRKRVGKAGQPPTVLVVEPRAADLERTRLLLA CCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHH EAGFRVVPVTRFDAAVPLFEVIRPAAVLLAAQAPDFAAVQVARRLRQLSHGAVPLLYLVD HCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC ERDAEARRYCLERGQCVDLVPRSGSGSELATKLHAQLKLKDAVLRAAAGEEAGTAQALHD CCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC PVTGLYNRPFLLEFISLEARRAERYGGGFSVVAAEVGGWSAFRKEFGRGMAERLLVYSAV CHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHCCCHHHHHHHHHHH VLGQTVRDADAVARVGDCQFALMLPGTPAESVPEVVSRVAARFDTARFQVEGKVVRTSLE HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECEEEEEEEE LGTVSFPDSVGTPTQLLSAAQQDMRRAREFRRMVGSTSRLSV ECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GFEAVNPGWASKSGGEKFTREGGTVGVRRKRVGKAGQPPTVLVVEPRAADLERTRLLLA CCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHH EAGFRVVPVTRFDAAVPLFEVIRPAAVLLAAQAPDFAAVQVARRLRQLSHGAVPLLYLVD HCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC ERDAEARRYCLERGQCVDLVPRSGSGSELATKLHAQLKLKDAVLRAAAGEEAGTAQALHD CCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC PVTGLYNRPFLLEFISLEARRAERYGGGFSVVAAEVGGWSAFRKEFGRGMAERLLVYSAV CHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHCCCHHHHHHHHHHH VLGQTVRDADAVARVGDCQFALMLPGTPAESVPEVVSRVAARFDTARFQVEGKVVRTSLE HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECEEEEEEEE LGTVSFPDSVGTPTQLLSAAQQDMRRAREFRRMVGSTSRLSV ECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9341680; 9384377 [H]