| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is chvI [H]
Identifier: 108763454
GI number: 108763454
Start: 5114019
End: 5114717
Strand: Direct
Name: chvI [H]
Synonym: MXAN_4164
Alternate gene names: 108763454
Gene position: 5114019-5114717 (Clockwise)
Preceding gene: 108756998
Following gene: 108760705
Centisome position: 55.95
GC content: 70.1
Gene sequence:
>699_bases GTGGCCGAACGTCCCACAGTCCTGGTCGTCGACGATGATCCTCACCTGAGGGAAATCGTCCGCTTCGCGCTGGAGCAGGG AGGCTTCCGGGTGGATGAGGCCGCCGATGGCCGCGCCGCCCTGACGCAGGTCGACCGCGGCCTCCCAGCGCTCATCGTCC TGGACATCATGATGCCGGAGCTGGACGGGCTCGCCGTGTGCCGTGAGGTCCGGCGCAAGCACGAGCTGCCCATCGTCTTC CTCTCCTCGCGGGATGACGAGGTCGACCGCATCCTGGGCCTGGAGCTGGGCGGCGACGACTACCTCACCAAGCCCTTCAG CCCGCGCGAGCTCGTGGCGCGCGTGAAGGCGGTGCTCCGGCGCGCACGGCCCGCGCCGGCCCCGGAGGTCGAAGCGCCCG CGGCGCGGATGCAGTCCCGAGGGCCGCTGCGCATGGATGCGGAGCGCTGGCGCGCGTGGTGGCAGGACACGGAAGTGGTG CTCACGGTGACGGAGTTCCAGCTCCTGGCCACGCTGCTCCGAGTCCCCGGCAAGGTCTTCACCCGGGATGAGCTGATGAA CCGCGTCTACGACGATGTCGTGGTCAGCGACCGGACCATCGACAGCCACGTGCGCCGGGTCCGGCAGAAGTTCGCGAGCG CGGGCGGAGACGTCATCGAGACGGTGCATGGCCTTGGCTATCGGCTCGCCCTCCCCTGA
Upstream 100 bases:
>100_bases GGTAGTGGTAGTCACGGCCGGGGTTGCGCCCCGGCCGTCTCCCTGGCCCGGGCGGGTGTAGAGTGCGGCAGTCGTCGCAA CCCTCCCCTCCCGAGCAGCC
Downstream 100 bases:
>100_bases GCGCCGCGCGCGCCCGCGCTTGTGGCTGGTGTTCGCCGCCGTGGGCGTGGCGGGGTTCGCCCTCACGCTGGCGGGGCTCG CCTTCGTGCGCGTCTACGAC
Product: DNA-binding response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MAERPTVLVVDDDPHLREIVRFALEQGGFRVDEAADGRAALTQVDRGLPALIVLDIMMPELDGLAVCREVRRKHELPIVF LSSRDDEVDRILGLELGGDDYLTKPFSPRELVARVKAVLRRARPAPAPEVEAPAARMQSRGPLRMDAERWRAWWQDTEVV LTVTEFQLLATLLRVPGKVFTRDELMNRVYDDVVVSDRTIDSHVRRVRQKFASAGGDVIETVHGLGYRLALP
Sequences:
>Translated_232_residues MAERPTVLVVDDDPHLREIVRFALEQGGFRVDEAADGRAALTQVDRGLPALIVLDIMMPELDGLAVCREVRRKHELPIVF LSSRDDEVDRILGLELGGDDYLTKPFSPRELVARVKAVLRRARPAPAPEVEAPAARMQSRGPLRMDAERWRAWWQDTEVV LTVTEFQLLATLLRVPGKVFTRDELMNRVYDDVVVSDRTIDSHVRRVRQKFASAGGDVIETVHGLGYRLALP >Mature_231_residues AERPTVLVVDDDPHLREIVRFALEQGGFRVDEAADGRAALTQVDRGLPALIVLDIMMPELDGLAVCREVRRKHELPIVFL SSRDDEVDRILGLELGGDDYLTKPFSPRELVARVKAVLRRARPAPAPEVEAPAARMQSRGPLRMDAERWRAWWQDTEVVL TVTEFQLLATLLRVPGKVFTRDELMNRVYDDVVVSDRTIDSHVRRVRQKFASAGGDVIETVHGLGYRLALP
Specific function: Member of a two-component regulatory system ChvG/ChvI [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=43.1718061674009, Blast_Score=187, Evalue=5e-49, Organism=Escherichia coli, GI1786599, Length=235, Percent_Identity=41.2765957446808, Blast_Score=167, Evalue=7e-43, Organism=Escherichia coli, GI1790860, Length=231, Percent_Identity=38.0952380952381, Blast_Score=162, Evalue=1e-41, Organism=Escherichia coli, GI1789809, Length=239, Percent_Identity=37.2384937238494, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1790863, Length=241, Percent_Identity=32.3651452282158, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI2367329, Length=224, Percent_Identity=37.0535714285714, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=34.2222222222222, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1787375, Length=228, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=9e-29, Organism=Escherichia coli, GI1786911, Length=239, Percent_Identity=36.8200836820084, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=31.858407079646, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1786784, Length=229, Percent_Identity=35.3711790393013, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1787229, Length=236, Percent_Identity=33.4745762711864, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=30.6382978723404, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1790299, Length=151, Percent_Identity=27.8145695364238, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=31.8965517241379, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1790437, Length=139, Percent_Identity=30.2158273381295, Blast_Score=61, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26167; Mature: 26035
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERPTVLVVDDDPHLREIVRFALEQGGFRVDEAADGRAALTQVDRGLPALIVLDIMMPE CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCC LDGLAVCREVRRKHELPIVFLSSRDDEVDRILGLELGGDDYLTKPFSPRELVARVKAVLR CCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCEECCCCCCCCCCCHHHHHHHHHHHHH RARPAPAPEVEAPAARMQSRGPLRMDAERWRAWWQDTEVVLTVTEFQLLATLLRVPGKVF HCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCC TRDELMNRVYDDVVVSDRTIDSHVRRVRQKFASAGGDVIETVHGLGYRLALP CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEECCC >Mature Secondary Structure AERPTVLVVDDDPHLREIVRFALEQGGFRVDEAADGRAALTQVDRGLPALIVLDIMMPE CCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCC LDGLAVCREVRRKHELPIVFLSSRDDEVDRILGLELGGDDYLTKPFSPRELVARVKAVLR CCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCEECCCCCCCCCCCHHHHHHHHHHHHH RARPAPAPEVEAPAARMQSRGPLRMDAERWRAWWQDTEVVLTVTEFQLLATLLRVPGKVF HCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCC TRDELMNRVYDDVVVSDRTIDSHVRRVRQKFASAGGDVIETVHGLGYRLALP CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407839 [H]