| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is dck [H]
Identifier: 108763441
GI number: 108763441
Start: 3873928
End: 3874542
Strand: Direct
Name: dck [H]
Synonym: MXAN_3331
Alternate gene names: 108763441
Gene position: 3873928-3874542 (Clockwise)
Preceding gene: 108762497
Following gene: 108760839
Centisome position: 42.39
GC content: 61.95
Gene sequence:
>615_bases GTGGCCAGGAAAAAGTTCATCGCCATCGCGGGCAACATCGGCGCCGGAAAGACGGAGCTGACGTCCTTCCTCTGCCGGAA GTACGGGTTGACGCCCTCCTTCGAACCCAACGACCAGAACCCCTATCTGGCGGACTTCTACAAGGACATGAAGACGTGGG CGTTCCGCTCACAGCTCTTCTTCTTGACGCACAAGTTCCGCCTGCACCGGGAGCTGGAGCGCACCTCGGGGACGGTGCTT CAGGACCGCACCCTCTATGAGGACGCGGAGATTTTCGCCAAGAACCTCCACCGGCAGCGGCTCATCGACAAGCGGGACTG GAAGACGTACTGCGAGCTGTACGAGACGATTTCGGAGTCGTTGCGGCCCCCCGACCTGATGATCTACCTCCGCTGCCCAG TGCAGACGATTCGTGAGCGCATCCGCATCCGTGGCCGGGCCATGGAGCGGGACATCCCCACCCGCTACCTGCAGCGCCTC AATGCCCTCTATGAGGAGTGGTTCGAGGGCTACCGCCTGTCGCCGGTGCTCGTGCTTCCCACGGACAAGCTCGACTATTT GACCAACCTGGTGGACCGCGTGGACCTCTTCCGGCAGATCGAGAAGCACCTGTGA
Upstream 100 bases:
>100_bases TTGGACGGGACGACGGGGGGGCATGCACTTCTTCTACCACGTCCTACCTACACGTTGTTTCTGGTGCGCGCCGCTCGGCG GGGTTACAAGCAGGGGTGGT
Downstream 100 bases:
>100_bases TGGAGGTCTACCTGCTGGCGACGGAGCAGGAGGGCCCGGCTCCCCTCGATGCACTGCGCACGTCCTTCGCGAACGATGAG GTGGAGTTCACCCCGGACGC
Product: deoxynucleoside kinase family protein
Products: NA
Alternate protein names: dAK/dCK [H]
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MARKKFIAIAGNIGAGKTELTSFLCRKYGLTPSFEPNDQNPYLADFYKDMKTWAFRSQLFFLTHKFRLHRELERTSGTVL QDRTLYEDAEIFAKNLHRQRLIDKRDWKTYCELYETISESLRPPDLMIYLRCPVQTIRERIRIRGRAMERDIPTRYLQRL NALYEEWFEGYRLSPVLVLPTDKLDYLTNLVDRVDLFRQIEKHL
Sequences:
>Translated_204_residues MARKKFIAIAGNIGAGKTELTSFLCRKYGLTPSFEPNDQNPYLADFYKDMKTWAFRSQLFFLTHKFRLHRELERTSGTVL QDRTLYEDAEIFAKNLHRQRLIDKRDWKTYCELYETISESLRPPDLMIYLRCPVQTIRERIRIRGRAMERDIPTRYLQRL NALYEEWFEGYRLSPVLVLPTDKLDYLTNLVDRVDLFRQIEKHL >Mature_203_residues ARKKFIAIAGNIGAGKTELTSFLCRKYGLTPSFEPNDQNPYLADFYKDMKTWAFRSQLFFLTHKFRLHRELERTSGTVLQ DRTLYEDAEIFAKNLHRQRLIDKRDWKTYCELYETISESLRPPDLMIYLRCPVQTIRERIRIRGRAMERDIPTRYLQRLN ALYEEWFEGYRLSPVLVLPTDKLDYLTNLVDRVDLFRQIEKHL
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dATP AND dCTP for DNA metabolism. The phosphate acceptor specificity is strict toward deoxyadenosine (dAdo) and deoxycytidine (dCyd). The specificity toward the sugar moiety of the n
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
Organism=Homo sapiens, GI290656975, Length=192, Percent_Identity=28.125, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI290656936, Length=192, Percent_Identity=28.125, Blast_Score=70, Evalue=9e-13, Organism=Homo sapiens, GI4503269, Length=238, Percent_Identity=25.6302521008403, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI290657203, Length=185, Percent_Identity=26.4864864864865, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI17738037, Length=188, Percent_Identity=32.4468085106383, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.74; =2.7.1.76 [H]
Molecular weight: Translated: 24536; Mature: 24404
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKKFIAIAGNIGAGKTELTSFLCRKYGLTPSFEPNDQNPYLADFYKDMKTWAFRSQLF CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FLTHKFRLHRELERTSGTVLQDRTLYEDAEIFAKNLHRQRLIDKRDWKTYCELYETISES HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRPPDLMIYLRCPVQTIRERIRIRGRAMERDIPTRYLQRLNALYEEWFEGYRLSPVLVLP CCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEC TDKLDYLTNLVDRVDLFRQIEKHL CCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARKKFIAIAGNIGAGKTELTSFLCRKYGLTPSFEPNDQNPYLADFYKDMKTWAFRSQLF CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FLTHKFRLHRELERTSGTVLQDRTLYEDAEIFAKNLHRQRLIDKRDWKTYCELYETISES HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRPPDLMIYLRCPVQTIRERIRIRGRAMERDIPTRYLQRLNALYEEWFEGYRLSPVLVLP CCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEC TDKLDYLTNLVDRVDLFRQIEKHL CCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]