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The map label for this gene is yjcC [H]

Identifier: 108762990

GI number: 108762990

Start: 2831840

End: 2832664

Strand: Direct

Name: yjcC [H]

Synonym: MXAN_2424

Alternate gene names: 108762990

Gene position: 2831840-2832664 (Clockwise)

Preceding gene: 108757242

Following gene: 108763579

Centisome position: 30.98

GC content: 68.12

Gene sequence:

>825_bases
ATGCCGGGGGCGGCGGAGCCCGGGCTGGGTGACTATCCCCGGGTGGGCTCACTCCAGCGGCTCGTCACGCGGACGCGCGC
GGGGTGGCTGGTGGATTTGCTCTCCGAGGAGCGGCTCACCACGCACTTCCAGCCCATCGTCCATGCGCAGGACACCCGCT
GCATCTTCGCGCACGAGGCGTTGATGCGAGGCCTGGAGCCGGACGGCACGCTGGTGCTGCCCGGACGGATGATGCAGACG
GCGCGCGAGGCGGACCTGCTGTTCCAACTGGACCTGGCGGCGCGTACCACGGCCATCCGGCAGGCGGTGAAGCACGGGCT
GGACACGCACCTCTTCATCAACTTCACGCCCACGGCCATCTACGACGCCACGGTCTGTCTTCGCTCCACGGTGGAGGCCA
TCCACGCGGCGGGCATTGCGCCGGAGCGGGTGGTGTTCGAAATCATCGAGACGGACCAGACGGCGGACGCGGAGCATCTG
CGCGGCATCGTGGACTTCTACCGCAAGTCGGGTTTCCGGGTGGCGCTGGACGACCTGGGCGCGGGCTTCTCGTCACTGAA
CCTCATCCACCGGCTGCGTCCCGACATCATCAAGCTGGACATGGAGCTGGTGCGTGACGTCCACCTGGACCCGTACAAAG
GCTCCATCGTGGAGAAGCTCCTGGAGATTGCGCGGACGCTGGGCATCCGCACGGTGGCGGAGGGCATCGAGACGCACGAG
GAGCTGCGCTGGGTCCGCTCGCACGGGGTGGACTTCGTGCAGGGCTACCTCATCGCCCGTCCGCAGAGTCCCCCCGTGGG
GGCGACGCCGTCGTTCACGGATTGA

Upstream 100 bases:

>100_bases
CGTCGAGGTGTGGGTGCCGGAGGCGGGGCTGTCGCCTCTGGCATCGAACCTGTTGGCCGCGCTCACGCAGGAGGAGGCGC
GGGCCACCCGGGCGCTGTTC

Downstream 100 bases:

>100_bases
GCAGGACGTTGCCGGTGGCCTGTCGCTCGAGGTTGGCGGCGCGGAGGATGCTCAGCTGGACGCCTGCCTCCTGGAGGGCG
AGCCGGGCATTGTATCCGTC

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MPGAAEPGLGDYPRVGSLQRLVTRTRAGWLVDLLSEERLTTHFQPIVHAQDTRCIFAHEALMRGLEPDGTLVLPGRMMQT
AREADLLFQLDLAARTTAIRQAVKHGLDTHLFINFTPTAIYDATVCLRSTVEAIHAAGIAPERVVFEIIETDQTADAEHL
RGIVDFYRKSGFRVALDDLGAGFSSLNLIHRLRPDIIKLDMELVRDVHLDPYKGSIVEKLLEIARTLGIRTVAEGIETHE
ELRWVRSHGVDFVQGYLIARPQSPPVGATPSFTD

Sequences:

>Translated_274_residues
MPGAAEPGLGDYPRVGSLQRLVTRTRAGWLVDLLSEERLTTHFQPIVHAQDTRCIFAHEALMRGLEPDGTLVLPGRMMQT
AREADLLFQLDLAARTTAIRQAVKHGLDTHLFINFTPTAIYDATVCLRSTVEAIHAAGIAPERVVFEIIETDQTADAEHL
RGIVDFYRKSGFRVALDDLGAGFSSLNLIHRLRPDIIKLDMELVRDVHLDPYKGSIVEKLLEIARTLGIRTVAEGIETHE
ELRWVRSHGVDFVQGYLIARPQSPPVGATPSFTD
>Mature_273_residues
PGAAEPGLGDYPRVGSLQRLVTRTRAGWLVDLLSEERLTTHFQPIVHAQDTRCIFAHEALMRGLEPDGTLVLPGRMMQTA
READLLFQLDLAARTTAIRQAVKHGLDTHLFINFTPTAIYDATVCLRSTVEAIHAAGIAPERVVFEIIETDQTADAEHLR
GIVDFYRKSGFRVALDDLGAGFSSLNLIHRLRPDIIKLDMELVRDVHLDPYKGSIVEKLLEIARTLGIRTVAEGIETHEE
LRWVRSHGVDFVQGYLIARPQSPPVGATPSFTD

Specific function: Overexpression reduces biofilm formation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1790496, Length=236, Percent_Identity=27.5423728813559, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI87081743, Length=236, Percent_Identity=29.2372881355932, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082096, Length=232, Percent_Identity=26.2931034482759, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI87081980, Length=252, Percent_Identity=27.7777777777778, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1787541, Length=236, Percent_Identity=28.8135593220339, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1787410, Length=223, Percent_Identity=27.8026905829596, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87081845, Length=237, Percent_Identity=28.6919831223629, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786507, Length=237, Percent_Identity=28.6919831223629, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788502, Length=239, Percent_Identity=26.7782426778243, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1788849, Length=208, Percent_Identity=25.4807692307692, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI226510982, Length=240, Percent_Identity=25.4166666666667, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787055, Length=227, Percent_Identity=28.6343612334802, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87081921, Length=235, Percent_Identity=26.8085106382979, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 30461; Mature: 30330

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGAAEPGLGDYPRVGSLQRLVTRTRAGWLVDLLSEERLTTHFQPIVHAQDTRCIFAHEA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LMRGLEPDGTLVLPGRMMQTAREADLLFQLDLAARTTAIRQAVKHGLDTHLFINFTPTAI
HHCCCCCCCCEEECHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
YDATVCLRSTVEAIHAAGIAPERVVFEIIETDQTADAEHLRGIVDFYRKSGFRVALDDLG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEHHHHC
AGFSSLNLIHRLRPDIIKLDMELVRDVHLDPYKGSIVEKLLEIARTLGIRTVAEGIETHE
CCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ELRWVRSHGVDFVQGYLIARPQSPPVGATPSFTD
HHHHHHHCCHHHHHCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
PGAAEPGLGDYPRVGSLQRLVTRTRAGWLVDLLSEERLTTHFQPIVHAQDTRCIFAHEA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LMRGLEPDGTLVLPGRMMQTAREADLLFQLDLAARTTAIRQAVKHGLDTHLFINFTPTAI
HHCCCCCCCCEEECHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
YDATVCLRSTVEAIHAAGIAPERVVFEIIETDQTADAEHLRGIVDFYRKSGFRVALDDLG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEHHHHC
AGFSSLNLIHRLRPDIIKLDMELVRDVHLDPYKGSIVEKLLEIARTLGIRTVAEGIETHE
CCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ELRWVRSHGVDFVQGYLIARPQSPPVGATPSFTD
HHHHHHHCCHHHHHCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]