| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757242
Identifier: 108757242
GI number: 108757242
Start: 2830097
End: 2831560
Strand: Direct
Name: 108757242
Synonym: MXAN_2423
Alternate gene names: NA
Gene position: 2830097-2831560 (Clockwise)
Preceding gene: 108758736
Following gene: 108762990
Centisome position: 30.96
GC content: 68.65
Gene sequence:
>1464_bases ATGCATGGGGGCATGAAACGCCTCCTCGCACTCACCAGCACCCTGGCGCTCGCCACCGCTTGCGGCAATGACAATCCGTC CGTTCCCAAGGCGGAGTGTCAGGTCGAGGCCATCGATGTGTCGGCCTGCCAGCTTTCAAGCCTCTCCGGCGTACAACCCG AGGGCATCTGGAACCTCAACATCAACCTCAACGACGGTTCCGGAGCCGCGGCCGCCATGCGGTTGTCGGGAGGGGGCAGC AACACCCAGATGCTGATGGGCCTCGCCGCCACGGAGCGGCAGAGCACCCCGGAGTCGTTCTTCCTGGCCAGCGAGTTCCA GGGCTCCAACAACGTGACGATGCGCTTCGCCGTCGCCGGGTGTTCCTCGTCCGGGCCCGGGCAGATGTCGGGCATCTTCC GGCGTTGCGCCAATGGCACCGCGGACATGAAGGGCACCTTCGAGGCCATCCGGCTGGGCCGCCGCGCGGGTGAAGCAGAG GCGTCCGGCGTGGAGCTGGTCAGCGAGGTGAAGCTGACCGAGGCCACGGCCACGAATGTCGCGGTGGCCCATGGCCACGC CTACGTGACGGCGGGGGCCAAGGGCCTCATCACCTTCGACCTGAGCGACCCCTCGCAGCCGCGCCAGGTCCGCCAGTACG AGCTGTCCAACGACTACTACACGGACGCGCTGGTGAACGGGAACACGCTCTATGTGGCCAGCCGCCGCAGCGGCATCGCC GTGTTCGACATCACCAACCCGGCGGTACCTGTCCGCCTGCGCTCCGTGCCCGAGTCCGTGGTGGAGGTGAACTCCCTCGC GCTGGACGGAAACGTCCTGTACGCGGCGTCGCCCGCGCCCAACGCGGAGGTGTACGTCTACGACGTCGCCACGCCCGCGG AGCCGAAGCAGCTCAGGCGGTACTTCGTCGAGGGCGCGGAGCCCCGGGCGGGGGAGGTGCCCCTGCACGTCGCGGCGATG GGCGGCCGGCTCTACGTGAGCAACTGGTCCTTCGGAATGACCGTCTCGGACGTCACCAACCCGGCGAGCCCGAAGCTGTT GGGCCGCTTCGCCAACGGCATGTCGGCCGCCACGGCGGTCGGCATGGTGGGAGACCGCGTCTACGCATTCGACGCGGGCG AGGACTGGGGCGCGCACCTGAGCGTGCTGGACGTGAGCGCGCCGGCCACGGTGGCCCGGACGGGTGAGTTCCGGACGCGC CCGGAGGTGTCCATCCGCTCGGTGGCGTTCTCCGGGACGAAGGTCTACCTGGCCTATGGTCAGGATGGCCTGCGCATCGT GGACGTGTCCGTCCCCGGCTCGCCCCAGCAGGTGGGTTACTACAACACCTGGCGGGAGACGGATGCGGGCCACGGCGTCG TGTTCCTCGAAGGCCTGAGCAAGGTGCACGTGCCGGGCGACGGATTCGTGTACGCGACGGATTCCTCGCGAGGCCTGCTC ATCTTCCGCGAGACGACGGAGTAG
Upstream 100 bases:
>100_bases GCCCCGACGATTTCTTTCCGTTTACTTGACGGGCAGTGGGCATCGCCCCCTCGGAGGCCGGGGGAGCGCGCTGTTTCGTC GGGTGCTGGCGCCGGATGAT
Downstream 100 bases:
>100_bases GCTGTCTGGATGAGCGACACCCCGACGCGGTCCTGCGGCAGGTGCCAGACGCTTCCTCCCCTCGCGGAGGGCGCCGGGCG TCTGTTCCTGTGGAGCCCGG
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein; LVIVD Repeat Protein; Peptidase M; Outer Membrane Adhesin Like Proteiin
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MHGGMKRLLALTSTLALATACGNDNPSVPKAECQVEAIDVSACQLSSLSGVQPEGIWNLNINLNDGSGAAAAMRLSGGGS NTQMLMGLAATERQSTPESFFLASEFQGSNNVTMRFAVAGCSSSGPGQMSGIFRRCANGTADMKGTFEAIRLGRRAGEAE ASGVELVSEVKLTEATATNVAVAHGHAYVTAGAKGLITFDLSDPSQPRQVRQYELSNDYYTDALVNGNTLYVASRRSGIA VFDITNPAVPVRLRSVPESVVEVNSLALDGNVLYAASPAPNAEVYVYDVATPAEPKQLRRYFVEGAEPRAGEVPLHVAAM GGRLYVSNWSFGMTVSDVTNPASPKLLGRFANGMSAATAVGMVGDRVYAFDAGEDWGAHLSVLDVSAPATVARTGEFRTR PEVSIRSVAFSGTKVYLAYGQDGLRIVDVSVPGSPQQVGYYNTWRETDAGHGVVFLEGLSKVHVPGDGFVYATDSSRGLL IFRETTE
Sequences:
>Translated_487_residues MHGGMKRLLALTSTLALATACGNDNPSVPKAECQVEAIDVSACQLSSLSGVQPEGIWNLNINLNDGSGAAAAMRLSGGGS NTQMLMGLAATERQSTPESFFLASEFQGSNNVTMRFAVAGCSSSGPGQMSGIFRRCANGTADMKGTFEAIRLGRRAGEAE ASGVELVSEVKLTEATATNVAVAHGHAYVTAGAKGLITFDLSDPSQPRQVRQYELSNDYYTDALVNGNTLYVASRRSGIA VFDITNPAVPVRLRSVPESVVEVNSLALDGNVLYAASPAPNAEVYVYDVATPAEPKQLRRYFVEGAEPRAGEVPLHVAAM GGRLYVSNWSFGMTVSDVTNPASPKLLGRFANGMSAATAVGMVGDRVYAFDAGEDWGAHLSVLDVSAPATVARTGEFRTR PEVSIRSVAFSGTKVYLAYGQDGLRIVDVSVPGSPQQVGYYNTWRETDAGHGVVFLEGLSKVHVPGDGFVYATDSSRGLL IFRETTE >Mature_487_residues MHGGMKRLLALTSTLALATACGNDNPSVPKAECQVEAIDVSACQLSSLSGVQPEGIWNLNINLNDGSGAAAAMRLSGGGS NTQMLMGLAATERQSTPESFFLASEFQGSNNVTMRFAVAGCSSSGPGQMSGIFRRCANGTADMKGTFEAIRLGRRAGEAE ASGVELVSEVKLTEATATNVAVAHGHAYVTAGAKGLITFDLSDPSQPRQVRQYELSNDYYTDALVNGNTLYVASRRSGIA VFDITNPAVPVRLRSVPESVVEVNSLALDGNVLYAASPAPNAEVYVYDVATPAEPKQLRRYFVEGAEPRAGEVPLHVAAM GGRLYVSNWSFGMTVSDVTNPASPKLLGRFANGMSAATAVGMVGDRVYAFDAGEDWGAHLSVLDVSAPATVARTGEFRTR PEVSIRSVAFSGTKVYLAYGQDGLRIVDVSVPGSPQQVGYYNTWRETDAGHGVVFLEGLSKVHVPGDGFVYATDSSRGLL IFRETTE
Specific function: Unknown
COG id: COG5276
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51375; Mature: 51375
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGGMKRLLALTSTLALATACGNDNPSVPKAECQVEAIDVSACQLSSLSGVQPEGIWNLN CCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCEEEEE INLNDGSGAAAAMRLSGGGSNTQMLMGLAATERQSTPESFFLASEFQGSNNVTMRFAVAG EEECCCCCCEEEEEECCCCCCCEEEEEEEHHCCCCCCCCEEEEEECCCCCCEEEEEEEEE CSSSGPGQMSGIFRRCANGTADMKGTFEAIRLGRRAGEAEASGVELVSEVKLTEATATNV CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHEEEEECCCCCE AVAHGHAYVTAGAKGLITFDLSDPSQPRQVRQYELSNDYYTDALVNGNTLYVASRRSGIA EEEECCEEEEECCCEEEEEECCCCCCCHHHHEEECCCCEEEEEEECCCEEEEEECCCCEE VFDITNPAVPVRLRSVPESVVEVNSLALDGNVLYAASPAPNAEVYVYDVATPAEPKQLRR EEEECCCCCEEEECCCCHHHHHHHEEEECCCEEEEECCCCCCEEEEEECCCCCCHHHHHH YFVEGAEPRAGEVPLHVAAMGGRLYVSNWSFGMTVSDVTNPASPKLLGRFANGMSAATAV HHHCCCCCCCCCCCEEEEEECCEEEEECCCCCCEECCCCCCCCHHHHHHHHCCCHHHHHH GMVGDRVYAFDAGEDWGAHLSVLDVSAPATVARTGEFRTRPEVSIRSVAFSGTKVYLAYG HHCCCEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCCEEEEEEECCCEEEEEEC QDGLRIVDVSVPGSPQQVGYYNTWRETDAGHGVVFLEGLSKVHVPGDGFVYATDSSRGLL CCCCEEEEEECCCCCCCCCEEECCCCCCCCCCEEEEECCCEEECCCCCEEEEECCCCEEE IFRETTE EEEECCC >Mature Secondary Structure MHGGMKRLLALTSTLALATACGNDNPSVPKAECQVEAIDVSACQLSSLSGVQPEGIWNLN CCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCEEEEE INLNDGSGAAAAMRLSGGGSNTQMLMGLAATERQSTPESFFLASEFQGSNNVTMRFAVAG EEECCCCCCEEEEEECCCCCCCEEEEEEEHHCCCCCCCCEEEEEECCCCCCEEEEEEEEE CSSSGPGQMSGIFRRCANGTADMKGTFEAIRLGRRAGEAEASGVELVSEVKLTEATATNV CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHEEEEECCCCCE AVAHGHAYVTAGAKGLITFDLSDPSQPRQVRQYELSNDYYTDALVNGNTLYVASRRSGIA EEEECCEEEEECCCEEEEEECCCCCCCHHHHEEECCCCEEEEEEECCCEEEEEECCCCEE VFDITNPAVPVRLRSVPESVVEVNSLALDGNVLYAASPAPNAEVYVYDVATPAEPKQLRR EEEECCCCCEEEECCCCHHHHHHHEEEECCCEEEEECCCCCCEEEEEECCCCCCHHHHHH YFVEGAEPRAGEVPLHVAAMGGRLYVSNWSFGMTVSDVTNPASPKLLGRFANGMSAATAV HHHCCCCCCCCCCCEEEEEECCEEEEECCCCCCEECCCCCCCCHHHHHHHHCCCHHHHHH GMVGDRVYAFDAGEDWGAHLSVLDVSAPATVARTGEFRTRPEVSIRSVAFSGTKVYLAYG HHCCCEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCCEEEEEEECCCEEEEEEC QDGLRIVDVSVPGSPQQVGYYNTWRETDAGHGVVFLEGLSKVHVPGDGFVYATDSSRGLL CCCCEEEEEECCCCCCCCCEEECCCCCCCCCCEEEEECCCEEECCCCCEEEEECCCCEEE IFRETTE EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA