| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yfdH [C]
Identifier: 108762838
GI number: 108762838
Start: 2279282
End: 2279992
Strand: Direct
Name: yfdH [C]
Synonym: MXAN_1944
Alternate gene names: 108762838
Gene position: 2279282-2279992 (Clockwise)
Preceding gene: 108760669
Following gene: 108757220
Centisome position: 24.94
GC content: 67.09
Gene sequence:
>711_bases ATGGCCCCGCACCTCACCGTCGTCATCCCTGTCTACAACGAGGAGTCCATCATCGCCTCGGCGGCGGAGGAGTTGCGCCA GGGGCTGGACGCGCGCGGGCTCGACTACGAAATCATCTTCGCGGAGAACGGCTCGCGCGACGCCACGCCGGCCATCCTCG AAGAGCTGTGCGCGAGCAACCCGCGCCTGCGCTGGTTCCACTCGGAGACGCCCAACTACGGCGTGGCGCTCAAGGCCGGC ATCCTCAAGGCCCGGGGCACCTACGTCATCTGTGATGAAATCGACCTGTGCGACCTGACCTTCTACGACGCGGCGCTGCC GCGGCTGGAGCGGGGCGAGGCGGACATGGTGGTGGGCTCCAAGGCGGCCAAGGGCGCCAGTGACCAGCGCCCGCTGATTC GCCGCGCGGCCACGCGGGTGCACAACAAGCTGCTGAAGGTGGCGCTGGGCTTCCAGGGCACGGACACGCACGGCCTGAAG GCGTTCCGCCGAGAGGCGCTGCTGCCCGTCATCCAGAAGTGCGTGGTGGACATGGATGTGTTCGCCAGCGAGTTCGTCAT CCGCGCGTGGCGCGAGGGCTTGCGGGTGATGGAGATTCCCATCCAGCTCCACGAGAAGCGCCAGCCCTCCATCCACCTGT TCAAGCGCGTGCCCAACGTGCTCAAGAACGTGGGCAAGCTATTCTACGTCATCCGCGTCCGCGGGACCTGA
Upstream 100 bases:
>100_bases GCGTGCGCGAGGATACTCAACGGTTGACATCCCCATCGCCCACCCGTCGCATTGTGTCGACGGGTGGCTTGGGGCGTGTT AGCCATCTCTGTTCGAGTTC
Downstream 100 bases:
>100_bases GCCGGGGAGGGCGCACCGTGCGGCTGGCGTCCATCTCCGTCGACCTCGACTCGCTGCCCCATTACTGCCGCATCCACGGC CTGCCGGAGTCGTTGCTGGA
Product: group 2 family glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase; Dolichol-P-Glucose Synthetase; Dolichyl-Phosphate Beta-Glucosyltransferase; Family 2 Glycosyl Transferase; Dolichol-Phosphate Mannosyltransferase; Glycosyltransferase; Glycosyl Transferase Family 2 Protein; GtrA Family Protein; Glycosyltransferase AglD; Dolichol-Phosphate Mannose Synthase; Gtra-Like Glycosyl Transferase; Family Glycosyltransferase; Glycosyltransferase D; Group 2 Family Glycosyl Transferase; Polysaccharide Biosynthesis Protein; Undecaprenol Glycosyltransferase; Glycosyl Transferase Group 2 Family; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MAPHLTVVIPVYNEESIIASAAEELRQGLDARGLDYEIIFAENGSRDATPAILEELCASNPRLRWFHSETPNYGVALKAG ILKARGTYVICDEIDLCDLTFYDAALPRLERGEADMVVGSKAAKGASDQRPLIRRAATRVHNKLLKVALGFQGTDTHGLK AFRREALLPVIQKCVVDMDVFASEFVIRAWREGLRVMEIPIQLHEKRQPSIHLFKRVPNVLKNVGKLFYVIRVRGT
Sequences:
>Translated_236_residues MAPHLTVVIPVYNEESIIASAAEELRQGLDARGLDYEIIFAENGSRDATPAILEELCASNPRLRWFHSETPNYGVALKAG ILKARGTYVICDEIDLCDLTFYDAALPRLERGEADMVVGSKAAKGASDQRPLIRRAATRVHNKLLKVALGFQGTDTHGLK AFRREALLPVIQKCVVDMDVFASEFVIRAWREGLRVMEIPIQLHEKRQPSIHLFKRVPNVLKNVGKLFYVIRVRGT >Mature_235_residues APHLTVVIPVYNEESIIASAAEELRQGLDARGLDYEIIFAENGSRDATPAILEELCASNPRLRWFHSETPNYGVALKAGI LKARGTYVICDEIDLCDLTFYDAALPRLERGEADMVVGSKAAKGASDQRPLIRRAATRVHNKLLKVALGFQGTDTHGLKA FRREALLPVIQKCVVDMDVFASEFVIRAWREGLRVMEIPIQLHEKRQPSIHLFKRVPNVLKNVGKLFYVIRVRGT
Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4503363, Length=204, Percent_Identity=27.9411764705882, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.- [C]
Molecular weight: Translated: 26433; Mature: 26302
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPHLTVVIPVYNEESIIASAAEELRQGLDARGLDYEIIFAENGSRDATPAILEELCASN CCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCC PRLRWFHSETPNYGVALKAGILKARGTYVICDEIDLCDLTFYDAALPRLERGEADMVVGS CCEEEEECCCCCCCEEEEHHHEECCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCEEECC KAAKGASDQRPLIRRAATRVHNKLLKVALGFQGTDTHGLKAFRREALLPVIQKCVVDMDV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FASEFVIRAWREGLRVMEIPIQLHEKRQPSIHLFKRVPNVLKNVGKLFYVIRVRGT HHHHHHHHHHHCCCEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECC >Mature Secondary Structure APHLTVVIPVYNEESIIASAAEELRQGLDARGLDYEIIFAENGSRDATPAILEELCASN CCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCC PRLRWFHSETPNYGVALKAGILKARGTYVICDEIDLCDLTFYDAALPRLERGEADMVVGS CCEEEEECCCCCCCEEEEHHHEECCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCEEECC KAAKGASDQRPLIRRAATRVHNKLLKVALGFQGTDTHGLKAFRREALLPVIQKCVVDMDV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FASEFVIRAWREGLRVMEIPIQLHEKRQPSIHLFKRVPNVLKNVGKLFYVIRVRGT HHHHHHHHHHHCCCEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA