| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757220
Identifier: 108757220
GI number: 108757220
Start: 2280010
End: 2280948
Strand: Direct
Name: 108757220
Synonym: MXAN_1945
Alternate gene names: NA
Gene position: 2280010-2280948 (Clockwise)
Preceding gene: 108762838
Following gene: 108757278
Centisome position: 24.95
GC content: 73.06
Gene sequence:
>939_bases GTGCGGCTGGCGTCCATCTCCGTCGACCTCGACTCGCTGCCCCATTACTGCCGCATCCACGGCCTGCCGGAGTCGTTGCT GGACGCACGCGCCCGCTCGCTGGTGCACGCGGTGGCGGTGCCACGCTTCCGGGAGCTGCTGGACGGGCTGGGCATCACGG GGACCTTCTTCGTCATCGGTGAGGACCTGGAGTCCGACCCGGTCGCCGTGGCGGGCATGCGCGCGTCCCACGAGGCGGGC ATCGAGGTGGCCAGCCACAGCCACGCCCATGACTACGCGCTGACGCGCCGGGGCCCCGAGGCCATCCACGCGGACCTGTC CCGCGCGGACGCCGCCATTCTCGCGGCCACGGGTGTGCGGCCGGAGGGGTTCCGCGCGCCGGGCTACACGCTGAACGCGG ACCTGTACGAGGCCACCGCGGCGCTGGGCTACCGGTATGGCTCCTCGGCCTTCCCCGCCGTGCCGTATTACTCCGCGAAG GCGGCGGTGATGGGGGCCCTGTCGGTGCTGGGGCGTCCGTCCCGCTCCGTGCTGGACACGCCCCGCGTGCTGCTGGCGCC TCGGGTGCCGTACCGGCCCGACCCGGCGCAGCCCTACCGGCGGGGCTCGGGCACCGTGCTGGAGTTGCCCATGACGGTGA CGCCCGCGCTGCGCTTCCCCCTCATCGGCACCTTCGCCACCACGCTGCCCCGCGCGTCCCTGCACGCGCTGTGGCGCACG TGCCGGCGGGACACCTTCTTCAACTTCGAACTGCACGGCGTGGACGTGCTGGACGCGTCGGACGGGATTCCCCCGGAGCT GGTGCGGCAGCAGCGGGATTTGCGCGTCAGCGCCACCCAGAAGATGGCGCGCCTGCGCGAGGTGTTCGGCTGGCTGAAGT CGGAGCGCGAGGTCCTCACGCTGCGCGACGTCGCCGGGCGGCTGTCGGCCTCGGTGTAA
Upstream 100 bases:
>100_bases CCATCCACCTGTTCAAGCGCGTGCCCAACGTGCTCAAGAACGTGGGCAAGCTATTCTACGTCATCCGCGTCCGCGGGACC TGAGCCGGGGAGGGCGCACC
Downstream 100 bases:
>100_bases GGCGTTCCCACGAGGGGACCTGTCCGCCAGCGTACGTCCCCGCCGTGCCTGGGTGTCCGTGGGGCACGCTTGCCATGCCA GGGCGAGGGCTTCCGCCGAC
Product: polysaccharide deacetylase domain-containing protein
Products: NA
Alternate protein names: Polysaccharide Deacetylase Domain-Containing Protein; Polysaccharide Deacetylase Family Protein; Polysaccharide Deacetylase Domain Protein; Chitooligosaccharide Deacetylase
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MRLASISVDLDSLPHYCRIHGLPESLLDARARSLVHAVAVPRFRELLDGLGITGTFFVIGEDLESDPVAVAGMRASHEAG IEVASHSHAHDYALTRRGPEAIHADLSRADAAILAATGVRPEGFRAPGYTLNADLYEATAALGYRYGSSAFPAVPYYSAK AAVMGALSVLGRPSRSVLDTPRVLLAPRVPYRPDPAQPYRRGSGTVLELPMTVTPALRFPLIGTFATTLPRASLHALWRT CRRDTFFNFELHGVDVLDASDGIPPELVRQQRDLRVSATQKMARLREVFGWLKSEREVLTLRDVAGRLSASV
Sequences:
>Translated_312_residues MRLASISVDLDSLPHYCRIHGLPESLLDARARSLVHAVAVPRFRELLDGLGITGTFFVIGEDLESDPVAVAGMRASHEAG IEVASHSHAHDYALTRRGPEAIHADLSRADAAILAATGVRPEGFRAPGYTLNADLYEATAALGYRYGSSAFPAVPYYSAK AAVMGALSVLGRPSRSVLDTPRVLLAPRVPYRPDPAQPYRRGSGTVLELPMTVTPALRFPLIGTFATTLPRASLHALWRT CRRDTFFNFELHGVDVLDASDGIPPELVRQQRDLRVSATQKMARLREVFGWLKSEREVLTLRDVAGRLSASV >Mature_312_residues MRLASISVDLDSLPHYCRIHGLPESLLDARARSLVHAVAVPRFRELLDGLGITGTFFVIGEDLESDPVAVAGMRASHEAG IEVASHSHAHDYALTRRGPEAIHADLSRADAAILAATGVRPEGFRAPGYTLNADLYEATAALGYRYGSSAFPAVPYYSAK AAVMGALSVLGRPSRSVLDTPRVLLAPRVPYRPDPAQPYRRGSGTVLELPMTVTPALRFPLIGTFATTLPRASLHALWRT CRRDTFFNFELHGVDVLDASDGIPPELVRQQRDLRVSATQKMARLREVFGWLKSEREVLTLRDVAGRLSASV
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33987; Mature: 33987
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLASISVDLDSLPHYCRIHGLPESLLDARARSLVHAVAVPRFRELLDGLGITGTFFVIG CCEEEEECCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE EDLESDPVAVAGMRASHEAGIEVASHSHAHDYALTRRGPEAIHADLSRADAAILAATGVR CCCCCCCEEEEECCCCCCCCCEECCCCCCHHHHHHCCCHHHHHHHHHHHCCEEEEECCCC PEGFRAPGYTLNADLYEATAALGYRYGSSAFPAVPYYSAKAAVMGALSVLGRPSRSVLDT CCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCC PRVLLAPRVPYRPDPAQPYRRGSGTVLELPMTVTPALRFPLIGTFATTLPRASLHALWRT CCEEEECCCCCCCCCCCCHHCCCCCEEEECCEECCHHHHHHHHHHHHHCCHHHHHHHHHH CRRDTFFNFELHGVDVLDASDGIPPELVRQQRDLRVSATQKMARLREVFGWLKSEREVLT HCCCCEEEEEECCEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEH LRDVAGRLSASV HHHHHHHHHCCC >Mature Secondary Structure MRLASISVDLDSLPHYCRIHGLPESLLDARARSLVHAVAVPRFRELLDGLGITGTFFVIG CCEEEEECCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE EDLESDPVAVAGMRASHEAGIEVASHSHAHDYALTRRGPEAIHADLSRADAAILAATGVR CCCCCCCEEEEECCCCCCCCCEECCCCCCHHHHHHCCCHHHHHHHHHHHCCEEEEECCCC PEGFRAPGYTLNADLYEATAALGYRYGSSAFPAVPYYSAKAAVMGALSVLGRPSRSVLDT CCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCC PRVLLAPRVPYRPDPAQPYRRGSGTVLELPMTVTPALRFPLIGTFATTLPRASLHALWRT CCEEEECCCCCCCCCCCCHHCCCCCEEEECCEECCHHHHHHHHHHHHHCCHHHHHHHHHH CRRDTFFNFELHGVDVLDASDGIPPELVRQQRDLRVSATQKMARLREVFGWLKSEREVLT HCCCCEEEEEECCEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEH LRDVAGRLSASV HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA