| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762771
Identifier: 108762771
GI number: 108762771
Start: 2559292
End: 2559912
Strand: Reverse
Name: 108762771
Synonym: MXAN_2218
Alternate gene names: NA
Gene position: 2559912-2559292 (Counterclockwise)
Preceding gene: 108757217
Following gene: 108760454
Centisome position: 28.01
GC content: 65.86
Gene sequence:
>621_bases GTGGCCGCCCCCACATTCCGCCTCGCGAAGACCATGACGCCCGTCCTGCCCAACCCGGATGATGTGCTCGGTACGCACAA CCCGCTCGTCATCGTCCTGCGTGACCTGCTCAGCGCGGAGGAGTGCGCCGCGCTCATCGAACGGATTGAAGCAGAGGGGC CCACGGCGGCCCCCATCACCACTTCCGCGGGCTTCGTGATGCGCCCGGACATCCGGAACAACTCCCGGGTGATGTTCGAC GACGTCCCCTTGGCGCAGACGTTGTTCGAGCGTGTCGCTCCGCATGTGCCGCACCGGCTCGAACACGAGTGGACCCTCTG TGGTGCCAATGAGCGCCTGCGCTGCTACCGATATGACGTGGGTGAATACTTCGCCCCGCATTTCGACGGCGCCTTCGTGA GGACGCGCGACGAGCGGAGCCTCCTCACCTTCATGGTCTACCTCAATGAATGTCCGGGCGGAGGCGCAACGAACTTCCTG TCGCTTGGGCACTCCGTGACGCCGCGCACGGGCAGCGCGCTGCTCTTCAATCACCGCTTGCTTCACGAGGGCGCCACCGT CACCCAGGGCCGCAAGTACGCGCTGCGCACCGACCTCATGTATCGGCGCCCGGCCTCATGA
Upstream 100 bases:
>100_bases AAACCCAGTCACCCAGGAGTCACCCCGTGGATGGATGCCAGGTGCCGTCGCCTGGTTGCTCGCGGGTCAACCGGGATAGA GTCCGCCCCACGGCCCGGCC
Downstream 100 bases:
>100_bases CCTTGAGTGGTGCCTGGTACAACGCGCAGCAGCCAGGCTGGGGCATCACCTTCAATACCCAGGGGAAGACCCAGGTTGCG CACCTGACCCTCTACGCGGG
Product: 2OG-Fe(II) oxygenase family oxidoreductase
Products: procollagen trans-4-hydroxy-L-proline; succinate; CO2
Alternate protein names: Procollagen-Proline Dioxygenase; 2OG-Fe(II) Oxygenase; WD-40 Repeat-Containing Protein; Adenylate Kinase; Iron-Regulated Protein
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MAAPTFRLAKTMTPVLPNPDDVLGTHNPLVIVLRDLLSAEECAALIERIEAEGPTAAPITTSAGFVMRPDIRNNSRVMFD DVPLAQTLFERVAPHVPHRLEHEWTLCGANERLRCYRYDVGEYFAPHFDGAFVRTRDERSLLTFMVYLNECPGGGATNFL SLGHSVTPRTGSALLFNHRLLHEGATVTQGRKYALRTDLMYRRPAS
Sequences:
>Translated_206_residues MAAPTFRLAKTMTPVLPNPDDVLGTHNPLVIVLRDLLSAEECAALIERIEAEGPTAAPITTSAGFVMRPDIRNNSRVMFD DVPLAQTLFERVAPHVPHRLEHEWTLCGANERLRCYRYDVGEYFAPHFDGAFVRTRDERSLLTFMVYLNECPGGGATNFL SLGHSVTPRTGSALLFNHRLLHEGATVTQGRKYALRTDLMYRRPAS >Mature_205_residues AAPTFRLAKTMTPVLPNPDDVLGTHNPLVIVLRDLLSAEECAALIERIEAEGPTAAPITTSAGFVMRPDIRNNSRVMFDD VPLAQTLFERVAPHVPHRLEHEWTLCGANERLRCYRYDVGEYFAPHFDGAFVRTRDERSLLTFMVYLNECPGGGATNFLS LGHSVTPRTGSALLFNHRLLHEGATVTQGRKYALRTDLMYRRPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.14.11.2
Molecular weight: Translated: 23036; Mature: 22904
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPTFRLAKTMTPVLPNPDDVLGTHNPLVIVLRDLLSAEECAALIERIEAEGPTAAPIT CCCCHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEE TSAGFVMRPDIRNNSRVMFDDVPLAQTLFERVAPHVPHRLEHEWTLCGANERLRCYRYDV CCCCEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECH GEYFAPHFDGAFVRTRDERSLLTFMVYLNECPGGGATNFLSLGHSVTPRTGSALLFNHRL HHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEEHHHH LHEGATVTQGRKYALRTDLMYRRPAS HHCCCCCCCCCEEEEHHHHHHCCCCC >Mature Secondary Structure AAPTFRLAKTMTPVLPNPDDVLGTHNPLVIVLRDLLSAEECAALIERIEAEGPTAAPIT CCCHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEE TSAGFVMRPDIRNNSRVMFDDVPLAQTLFERVAPHVPHRLEHEWTLCGANERLRCYRYDV CCCCEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECH GEYFAPHFDGAFVRTRDERSLLTFMVYLNECPGGGATNFLSLGHSVTPRTGSALLFNHRL HHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEEHHHH LHEGATVTQGRKYALRTDLMYRRPAS HHCCCCCCCCCEEEEHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: procollagen L-proline; 2-oxoglutarate; O2
Specific reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA