| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762727
Identifier: 108762727
GI number: 108762727
Start: 3692224
End: 3692628
Strand: Direct
Name: 108762727
Synonym: MXAN_3152
Alternate gene names: NA
Gene position: 3692224-3692628 (Clockwise)
Preceding gene: 108763572
Following gene: 108763330
Centisome position: 40.4
GC content: 64.94
Gene sequence:
>405_bases ATGCCTGTCACCCTGATGAACCCCGAAGGAATGATGAAGCCCGACGTGTACCGGAAGGTGGCGGTCGCCACCGGCAGCAG GCAGGTGCACATCGCAGGGCAGGTCGCGTACGACGCGGATGGGCAGCTCGTCGCACGAGGAGATCTGGCTGGGCAGGTCG CGCAGGCCTACCGCAACGTCGCCATCGCTCTCGCGGCGGCCGGTGCGACGTTCAACGACGTCGTTCGGCTGACGATTTAC GTGGTCGACTGGAAGCACGAGCGGATGCCGGACTTCCTGGCCGGCATCGAGCAGGTCTCCAAGGAGTTGAACATCGTGCC GGCGCCAGCCTCGCTGATTGGTGTCTCCGTGCTCTTCGAGCCGGGCGTCCTCGTCGAGATTGAAGCCACGGCGGTCGTGG ATTGA
Upstream 100 bases:
>100_bases CCCTCCTGTCGCTGGAGTGGGGAACGCCGTTCGTCAGTGGGCTCGGTATACGCGTCCGGCAATCGCTCCTTTCCTCAACC TCACTCATTGGAGAGCACCC
Downstream 100 bases:
>100_bases CCCACGCCGTACCCCGCCATCGGGCGTCCCTCGGTCGATGAATCGACGGGCGCTCGATGGTGGGACTGCATCCACGACTG ACGGCACGTCGCGGCGGTCA
Product: endoribonuclease L-PSP family protein
Products: NA
Alternate protein names: Endoribonuclease; Pyrimidine Utilization Protein C; Endoribonuclease L-PSP Family Protein; Translational Inhibitor Protein; Ribonuclease; Translation Initiation Inhibitor; Endoribonuclease Inhibits Protein Synthesis
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPVTLMNPEGMMKPDVYRKVAVATGSRQVHIAGQVAYDADGQLVARGDLAGQVAQAYRNVAIALAAAGATFNDVVRLTIY VVDWKHERMPDFLAGIEQVSKELNIVPAPASLIGVSVLFEPGVLVEIEATAVVD
Sequences:
>Translated_134_residues MPVTLMNPEGMMKPDVYRKVAVATGSRQVHIAGQVAYDADGQLVARGDLAGQVAQAYRNVAIALAAAGATFNDVVRLTIY VVDWKHERMPDFLAGIEQVSKELNIVPAPASLIGVSVLFEPGVLVEIEATAVVD >Mature_133_residues PVTLMNPEGMMKPDVYRKVAVATGSRQVHIAGQVAYDADGQLVARGDLAGQVAQAYRNVAIALAAAGATFNDVVRLTIYV VDWKHERMPDFLAGIEQVSKELNIVPAPASLIGVSVLFEPGVLVEIEATAVVD
Specific function: Unknown
COG id: COG0251
COG function: function code J; Putative translation initiation inhibitor, yjgF family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14260; Mature: 14128
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTLMNPEGMMKPDVYRKVAVATGSRQVHIAGQVAYDADGQLVARGDLAGQVAQAYRNV CCEEEECCCCCCCCHHHHEEEEECCCEEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHE AIALAAAGATFNDVVRLTIYVVDWKHERMPDFLAGIEQVSKELNIVPAPASLIGVSVLFE EEEEEECCCCHHCEEEEEEEEEECCCCCCCHHHHHHHHHHHHCEEEECCHHHHEEEEEEC PGVLVEIEATAVVD CCEEEEEEEEEECC >Mature Secondary Structure PVTLMNPEGMMKPDVYRKVAVATGSRQVHIAGQVAYDADGQLVARGDLAGQVAQAYRNV CEEEECCCCCCCCHHHHEEEEECCCEEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHE AIALAAAGATFNDVVRLTIYVVDWKHERMPDFLAGIEQVSKELNIVPAPASLIGVSVLFE EEEEEECCCCHHCEEEEEEEEEECCCCCCCHHHHHHHHHHHHCEEEECCHHHHEEEEEEC PGVLVEIEATAVVD CCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA