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The map label for this gene is xerC [H]

Identifier: 108762667

GI number: 108762667

Start: 2194592

End: 2195269

Strand: Direct

Name: xerC [H]

Synonym: MXAN_1873

Alternate gene names: 108762667

Gene position: 2194592-2195269 (Clockwise)

Preceding gene: 108761439

Following gene: 108757547

Centisome position: 24.01

GC content: 69.03

Gene sequence:

>678_bases
ATGACTTGTCTTGTCGGGGCGACAGAGCGCGTATGGCCGCGTCCTCTTCACGAAGGAGCCGCCATGTCTGCCTATGCTGC
TGTCGCCCGAGCCCCGCGCACCCTCACGGAGAAGGAGGTGGCGCTGCTGCTGCGCGCCACGGGGCTGCACAAGGATGGAT
TCAGGGACCACTGCCTCTACAGCCTCGCACTGGCCTCGGGCCTGCGTGAGCACGAGCTGGTGGCCCTCAACATCGGCGAC
GTCTTCGACGAGCGCGGGCGCGCACGCCGGCACGTGACGCTGACCGTCTTCAAGGGCAGCCGCCGGCACCCGGGCCCCCA
GGAGGTTGTCCTCTCGGACACGGTGCGCGCGAAGCTGGAGAAGCTGCTGCGCCTGAAGCGCGCGCAGGGGCATGACGTGA
GCCCCCAGGCGCCGCTCTTCCTGAGCCGCAAGGGCCTGCGCCTGTCCACGCGGCAGGTGCGCCACGGCTTCGCGGTGTGG
CAGGTGCGCGCGGGCCTGGAGCGGCACCTGAACTTCCACGCCGTGCGCCACACCGCATGCACCGGGGTGTACCGAAGGAC
GAAGGACATCCGCCTCACCCAGAAGTTCGCGAGGCAGCGAAGCGTCGACTCCACCGCCATCTACACGCACTCCTCGGAGG
ACGAGCTGGTGCGCGTGACGAACGACTTGCCCTGCTGA

Upstream 100 bases:

>100_bases
GAATGCGACAGGCTGATTCACAGGGACTCCTTCCTGGAGAGGTTGGGGAAGGCCAGGGCCGCTTGCGGCCCCGGCGGAGA
TTCAATGAGCAGCGTGGTTA

Downstream 100 bases:

>100_bases
TGGGGCACGCCGCCTCCGCGCTGAGCGCCCGCGAGAGCCCCTGGTTGGGCCGGGGTGCCGCGCGGAGGCGGTGAGGGGCA
GGCGTGCGCAAGGCTCGCGC

Product: phage integrase family site specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTCLVGATERVWPRPLHEGAAMSAYAAVARAPRTLTEKEVALLLRATGLHKDGFRDHCLYSLALASGLREHELVALNIGD
VFDERGRARRHVTLTVFKGSRRHPGPQEVVLSDTVRAKLEKLLRLKRAQGHDVSPQAPLFLSRKGLRLSTRQVRHGFAVW
QVRAGLERHLNFHAVRHTACTGVYRRTKDIRLTQKFARQRSVDSTAIYTHSSEDELVRVTNDLPC

Sequences:

>Translated_225_residues
MTCLVGATERVWPRPLHEGAAMSAYAAVARAPRTLTEKEVALLLRATGLHKDGFRDHCLYSLALASGLREHELVALNIGD
VFDERGRARRHVTLTVFKGSRRHPGPQEVVLSDTVRAKLEKLLRLKRAQGHDVSPQAPLFLSRKGLRLSTRQVRHGFAVW
QVRAGLERHLNFHAVRHTACTGVYRRTKDIRLTQKFARQRSVDSTAIYTHSSEDELVRVTNDLPC
>Mature_224_residues
TCLVGATERVWPRPLHEGAAMSAYAAVARAPRTLTEKEVALLLRATGLHKDGFRDHCLYSLALASGLREHELVALNIGDV
FDERGRARRHVTLTVFKGSRRHPGPQEVVLSDTVRAKLEKLLRLKRAQGHDVSPQAPLFLSRKGLRLSTRQVRHGFAVWQ
VRAGLERHLNFHAVRHTACTGVYRRTKDIRLTQKFARQRSVDSTAIYTHSSEDELVRVTNDLPC

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=203, Percent_Identity=29.5566502463054, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 25381; Mature: 25249

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCLVGATERVWPRPLHEGAAMSAYAAVARAPRTLTEKEVALLLRATGLHKDGFRDHCLY
CEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
SLALASGLREHELVALNIGDVFDERGRARRHVTLTVFKGSRRHPGPQEVVLSDTVRAKLE
HHHHHCCCCCCEEEEEECHHHHHHCCCCCEEEEEEEEECCCCCCCHHHEEHHHHHHHHHH
KLLRLKRAQGHDVSPQAPLFLSRKGLRLSTRQVRHGFAVWQVRAGLERHLNFHAVRHTAC
HHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHH
TGVYRRTKDIRLTQKFARQRSVDSTAIYTHSSEDELVRVTNDLPC
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCC
>Mature Secondary Structure 
TCLVGATERVWPRPLHEGAAMSAYAAVARAPRTLTEKEVALLLRATGLHKDGFRDHCLY
EEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
SLALASGLREHELVALNIGDVFDERGRARRHVTLTVFKGSRRHPGPQEVVLSDTVRAKLE
HHHHHCCCCCCEEEEEECHHHHHHCCCCCEEEEEEEEECCCCCCCHHHEEHHHHHHHHHH
KLLRLKRAQGHDVSPQAPLFLSRKGLRLSTRQVRHGFAVWQVRAGLERHLNFHAVRHTAC
HHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHH
TGVYRRTKDIRLTQKFARQRSVDSTAIYTHSSEDELVRVTNDLPC
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]