Click here to switch to the map view.

The map label for this gene is 108757547

Identifier: 108757547

GI number: 108757547

Start: 2202566

End: 2203399

Strand: Direct

Name: 108757547

Synonym: MXAN_1879

Alternate gene names: NA

Gene position: 2202566-2203399 (Clockwise)

Preceding gene: 108762667

Following gene: 108762362

Centisome position: 24.1

GC content: 63.91

Gene sequence:

>834_bases
TTGCCGAGCGCTGGGCTGGGACGATGTGCGCCTGTGCGTAGATGCTGGAACACACTTCACGAGGAACTCGGCGTGTCCAT
TCGGACGGCCGAAGCGCAGCGCGCCTACCGCCTGCTGCGGCGCAATTGGGAGACACTCGAAGACTTCGAGCAGCCAGAGG
CCCTTGTCGCATTTCTCACCGCGCGCGAGGGGGACTCCCACGTCAAGGACGCAGTGCTTGCCGGCCTCGTCACGCTGGCG
CAGATGCGGGCGGAGTCCGGCTTCTTCACGGCGCTGTTGTGGCTGGGAGTATGGCCGGGGCTGGACGGCGTGTATCGCCG
CTGTCTCAGGCGCTTTCGTGTCTCGCCCGCGGAGGTGGTTTCTGCGATTGCCGCGTCCTTCCTGGGACTCGTGGCGCGCG
TCAACTTGTCCAGCGTCCAGCGGGTGGCAGCAGCACTCGTGCTGGGTACCGAGCGCGACGTCCTGAAGGCCTTGAGCAAG
GAGCGAGGGGCCGAACTCCATGGCGTGTTGGCAGAGACGGGGAGCGGGGAGCCCCAACTGGACCTGCCGACACCTTCTGT
GTCGCTCGTCCTCTCCTTCGAGTCGGAGATGGCGGAGCTGCGTGCATGGCTTCGCCCTCTTGTTGGAGACGACACGGAGC
TGCTGGTGTCCGTCCTTCTCTATGAGGAGGGCTATGTCGAGGTGGGGGCGAGCTTGGGGCTTGCGCCTGCGGCAGTGCGC
AAGCGCGTCCAGCGGGCCCTGGGGCGCCTGCGAAAAATGAAGAAAAAAATGCCCGGAAAATTTCGTTGTCCCAAATCGCT
TCGCGAAAGTGCTTTTAGTAGTGGTGAGATTTGA

Upstream 100 bases:

>100_bases
GTCCCCACAGCGTCCTGGCGCTCCCACGAATACGGGAGCTGCTGGACGCTGACGTCGCTTCTCGTGTGGGACTCGCCACG
CTTCCCCATTCCGCTGGCCC

Downstream 100 bases:

>100_bases
AACAACCTGGACGGGATTGAAGTCGCAGCAGGGCGGGAGACGGCGCGGTGGCCTGCAATGTCAGGCGGCTGATGTCCCCG
ATTCATTGCTGCCGGGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MPSAGLGRCAPVRRCWNTLHEELGVSIRTAEAQRAYRLLRRNWETLEDFEQPEALVAFLTAREGDSHVKDAVLAGLVTLA
QMRAESGFFTALLWLGVWPGLDGVYRRCLRRFRVSPAEVVSAIAASFLGLVARVNLSSVQRVAAALVLGTERDVLKALSK
ERGAELHGVLAETGSGEPQLDLPTPSVSLVLSFESEMAELRAWLRPLVGDDTELLVSVLLYEEGYVEVGASLGLAPAAVR
KRVQRALGRLRKMKKKMPGKFRCPKSLRESAFSSGEI

Sequences:

>Translated_277_residues
MPSAGLGRCAPVRRCWNTLHEELGVSIRTAEAQRAYRLLRRNWETLEDFEQPEALVAFLTAREGDSHVKDAVLAGLVTLA
QMRAESGFFTALLWLGVWPGLDGVYRRCLRRFRVSPAEVVSAIAASFLGLVARVNLSSVQRVAAALVLGTERDVLKALSK
ERGAELHGVLAETGSGEPQLDLPTPSVSLVLSFESEMAELRAWLRPLVGDDTELLVSVLLYEEGYVEVGASLGLAPAAVR
KRVQRALGRLRKMKKKMPGKFRCPKSLRESAFSSGEI
>Mature_276_residues
PSAGLGRCAPVRRCWNTLHEELGVSIRTAEAQRAYRLLRRNWETLEDFEQPEALVAFLTAREGDSHVKDAVLAGLVTLAQ
MRAESGFFTALLWLGVWPGLDGVYRRCLRRFRVSPAEVVSAIAASFLGLVARVNLSSVQRVAAALVLGTERDVLKALSKE
RGAELHGVLAETGSGEPQLDLPTPSVSLVLSFESEMAELRAWLRPLVGDDTELLVSVLLYEEGYVEVGASLGLAPAAVRK
RVQRALGRLRKMKKKMPGKFRCPKSLRESAFSSGEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30383; Mature: 30251

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAGLGRCAPVRRCWNTLHEELGVSIRTAEAQRAYRLLRRNWETLEDFEQPEALVAFLT
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHH
AREGDSHVKDAVLAGLVTLAQMRAESGFFTALLWLGVWPGLDGVYRRCLRRFRVSPAEVV
HCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
SAIAASFLGLVARVNLSSVQRVAAALVLGTERDVLKALSKERGAELHGVLAETGSGEPQL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
DLPTPSVSLVLSFESEMAELRAWLRPLVGDDTELLVSVLLYEEGYVEVGASLGLAPAAVR
CCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHH
KRVQRALGRLRKMKKKMPGKFRCPKSLRESAFSSGEI
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
PSAGLGRCAPVRRCWNTLHEELGVSIRTAEAQRAYRLLRRNWETLEDFEQPEALVAFLT
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHH
AREGDSHVKDAVLAGLVTLAQMRAESGFFTALLWLGVWPGLDGVYRRCLRRFRVSPAEVV
HCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
SAIAASFLGLVARVNLSSVQRVAAALVLGTERDVLKALSKERGAELHGVLAETGSGEPQL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
DLPTPSVSLVLSFESEMAELRAWLRPLVGDDTELLVSVLLYEEGYVEVGASLGLAPAAVR
CCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHH
KRVQRALGRLRKMKKKMPGKFRCPKSLRESAFSSGEI
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA