| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pru [H]
Identifier: 108762589
GI number: 108762589
Start: 4666350
End: 4666820
Strand: Reverse
Name: pru [H]
Synonym: MXAN_3882
Alternate gene names: 108762589
Gene position: 4666820-4666350 (Counterclockwise)
Preceding gene: 108758789
Following gene: 108763378
Centisome position: 51.06
GC content: 69.0
Gene sequence:
>471_bases GTGTCCATGACGAGGCGAAATAGGGCGGCCGCGTTCGCGGTGGCTGGCGTATGCGGGTTGCTGCCAGGACTCGCGGGTGC CGTCTGCCAGATACGCAGCACGATAGGGGTGAGCTTCGGCACCTACCTCACCACCGACCTGCTGCCCCGGGACTCCGCCG GGAGCATCACCTACCGGTGTGAAGGGCAGATCACCCCCATCACCATCGACTTCAGCGCCGGTGGCTCCGGCACCCCCCTG GCGCGCAGCATGGCGGGGCCGGGCGCCCAGCGCTTGGAATACAACCTCTACGTGGACGCGACGCGCCTCATCGTCTGGGG GAACGGCACGTCGGGCACGGGGCGCTATGGGCCCGTCGTCCCCTTGTTCGGCGTGGAGGTGACGGTGCCCATCTTCGGGC GCATCCCGGCCGGACAGGCCATCCCCGCGGGGGCCTATGCGGACACCGTGGTGATGACGGTGACCTTCTGA
Upstream 100 bases:
>100_bases CGTCTGCCGGCGACAGTCGTCTACCCCAAGGGCCGTTGCGCGACCTCGCTGGAGGTTCCATCCCTCGAGGGCAAGGTCAT TGACCTGGGAACCGTGAGGT
Downstream 100 bases:
>100_bases GGGGCCGGTCCCTCCGTCACTGGAGCACCGCCAGCAGGTCTCCGCCCTGGACGGAGGCCTTGAGCGCGGGGACGACCTCC GCCACGGTGCCGGCGCGCGG
Product: spore coat protein domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSMTRRNRAAAFAVAGVCGLLPGLAGAVCQIRSTIGVSFGTYLTTDLLPRDSAGSITYRCEGQITPITIDFSAGGSGTPL ARSMAGPGAQRLEYNLYVDATRLIVWGNGTSGTGRYGPVVPLFGVEVTVPIFGRIPAGQAIPAGAYADTVVMTVTF
Sequences:
>Translated_156_residues MSMTRRNRAAAFAVAGVCGLLPGLAGAVCQIRSTIGVSFGTYLTTDLLPRDSAGSITYRCEGQITPITIDFSAGGSGTPL ARSMAGPGAQRLEYNLYVDATRLIVWGNGTSGTGRYGPVVPLFGVEVTVPIFGRIPAGQAIPAGAYADTVVMTVTF >Mature_155_residues SMTRRNRAAAFAVAGVCGLLPGLAGAVCQIRSTIGVSFGTYLTTDLLPRDSAGSITYRCEGQITPITIDFSAGGSGTPLA RSMAGPGAQRLEYNLYVDATRLIVWGNGTSGTGRYGPVVPLFGVEVTVPIFGRIPAGQAIPAGAYADTVVMTVTF
Specific function: A late-developmental spore coat protein [H]
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Secreted. Spore wall, perispore. Note=Secreted across the membrane to assemble on the spore surface [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007893 [H]
Pfam domain/function: PF05229 SCPU [H]
EC number: NA
Molecular weight: Translated: 16108; Mature: 15977
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTRRNRAAAFAVAGVCGLLPGLAGAVCQIRSTIGVSFGTYLTTDLLPRDSAGSITYRC CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEE EGQITPITIDFSAGGSGTPLARSMAGPGAQRLEYNLYVDATRLIVWGNGTSGTGRYGPVV CCEEEEEEEEECCCCCCCCCHHHHCCCCHHHEEEEEEEEEEEEEEECCCCCCCCCCCCEE PLFGVEVTVPIFGRIPAGQAIPAGAYADTVVMTVTF EEECCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure SMTRRNRAAAFAVAGVCGLLPGLAGAVCQIRSTIGVSFGTYLTTDLLPRDSAGSITYRC CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEE EGQITPITIDFSAGGSGTPLARSMAGPGAQRLEYNLYVDATRLIVWGNGTSGTGRYGPVV CCEEEEEEEEECCCCCCCCCHHHHCCCCHHHEEEEEEEEEEEEEEECCCCCCCCCCCCEE PLFGVEVTVPIFGRIPAGQAIPAGAYADTVVMTVTF EEECCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1904442 [H]