| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yecO [C]
Identifier: 108762522
GI number: 108762522
Start: 1831997
End: 1832602
Strand: Direct
Name: yecO [C]
Synonym: MXAN_1559
Alternate gene names: 108762522
Gene position: 1831997-1832602 (Clockwise)
Preceding gene: 108761529
Following gene: 108763477
Centisome position: 20.04
GC content: 67.33
Gene sequence:
>606_bases ATGAAGCGAATGATGGTGGTTTTCGCGTTCACGGCGGCGATGGCCGCGAACGCCGCGAGCGTTTCGACGGCGCAGCAGAC GGTGACGGTGCAGGTCCGCGGACCCGCGGGCAGTTCGATTCAGTCGCCCGAGGTTCCCTTCGTCCCCACGCCGGAAGGTG CCGTGGACGGGATGCTGGCATTGGCTGGCGTGAAGCCCGGGGACACTGTCTATGATTTGGGCAGCGGTGACGGCCGCATC GTCATCTCCGCGGTCCAGAAGCACGGGGCGAAGCACGCCGTGGGCGTGGACATCAACCCGGAGCGCATCGCCGAGGCCAA CCAGAACGCGAGCCAGGCGGGCGTGAAGAACAAGGTGGAGTTCCGCCAGGGGGACCTCTTCGACGCGGACATCCGTGACG CGTCGGTGGTGACGCTCTACCTGTTGCCCTCCGTCAACGAGCGGCTCAAGTCCAAGCTGCTCTCGGAGCTGAAGCCAGGC ACGCGCATCGTGTCGCACAGCTTCGACATGGGTGACTGGGCGCCGACCAAGACGGTGCAGAGCGAGGGACGGACGCTCTA CCTCTGGGTCGTCCCCGAGCGCGGCACGGGCGGCGCGCCCCGCTGA
Upstream 100 bases:
>100_bases TGCTGCTCGCCGTGGAGGCGGTGCGCACCCGCAGGGGCTCGCAGGGGACCTCCCCCAAGGCCAGTTCCTCTCCCAGACTG CAACGAACGAAGGAGGCGAC
Downstream 100 bases:
>100_bases GTGCGGCTCGAGGCGTCCGGGGCCGGCCACCTCGCATGGAGGGGCCGGGCCATTTCACGTCAGGGCGCCGGAGGCGGCTG ACCCGGCGTGCGCGAGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Type; Histone Methylation DOT1 Family Protein; Methyltransferase; Ribosomal Methyltransferase; rRNA Methylase Family Protein; RNA Methylase Family UPF; SAM-Dependent Methyltransferase; RNA Methylase Family; Cyclopropane Fatty Acid Synthase-Like Protein; Ribosomal Methylase-Like Protein; Methylase
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKRMMVVFAFTAAMAANAASVSTAQQTVTVQVRGPAGSSIQSPEVPFVPTPEGAVDGMLALAGVKPGDTVYDLGSGDGRI VISAVQKHGAKHAVGVDINPERIAEANQNASQAGVKNKVEFRQGDLFDADIRDASVVTLYLLPSVNERLKSKLLSELKPG TRIVSHSFDMGDWAPTKTVQSEGRTLYLWVVPERGTGGAPR
Sequences:
>Translated_201_residues MKRMMVVFAFTAAMAANAASVSTAQQTVTVQVRGPAGSSIQSPEVPFVPTPEGAVDGMLALAGVKPGDTVYDLGSGDGRI VISAVQKHGAKHAVGVDINPERIAEANQNASQAGVKNKVEFRQGDLFDADIRDASVVTLYLLPSVNERLKSKLLSELKPG TRIVSHSFDMGDWAPTKTVQSEGRTLYLWVVPERGTGGAPR >Mature_201_residues MKRMMVVFAFTAAMAANAASVSTAQQTVTVQVRGPAGSSIQSPEVPFVPTPEGAVDGMLALAGVKPGDTVYDLGSGDGRI VISAVQKHGAKHAVGVDINPERIAEANQNASQAGVKNKVEFRQGDLFDADIRDASVVTLYLLPSVNERLKSKLLSELKPG TRIVSHSFDMGDWAPTKTVQSEGRTLYLWVVPERGTGGAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13027600, Length=155, Percent_Identity=39.3548387096774, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI154240720, Length=131, Percent_Identity=31.2977099236641, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24648672, Length=145, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21273; Mature: 21273
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMMVVFAFTAAMAANAASVSTAQQTVTVQVRGPAGSSIQSPEVPFVPTPEGAVDGMLA CCCEEEEEEHHHHHHCCCHHCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCHHCCEEE LAGVKPGDTVYDLGSGDGRIVISAVQKHGAKHAVGVDINPERIAEANQNASQAGVKNKVE EECCCCCCEEEECCCCCCEEEEEEHHHCCCCEEEECCCCHHHHHHCCCCCHHCCCCCCEE FRQGDLFDADIRDASVVTLYLLPSVNERLKSKLLSELKPGTRIVSHSFDMGDWAPTKTVQ ECCCCEECCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHH SEGRTLYLWVVPERGTGGAPR CCCCEEEEEEEECCCCCCCCC >Mature Secondary Structure MKRMMVVFAFTAAMAANAASVSTAQQTVTVQVRGPAGSSIQSPEVPFVPTPEGAVDGMLA CCCEEEEEEHHHHHHCCCHHCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCHHCCEEE LAGVKPGDTVYDLGSGDGRIVISAVQKHGAKHAVGVDINPERIAEANQNASQAGVKNKVE EECCCCCCEEEECCCCCCEEEEEEHHHCCCCEEEECCCCHHHHHHCCCCCHHCCCCCCEE FRQGDLFDADIRDASVVTLYLLPSVNERLKSKLLSELKPGTRIVSHSFDMGDWAPTKTVQ ECCCCEECCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHH SEGRTLYLWVVPERGTGGAPR CCCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA