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The map label for this gene is ydiB [H]

Identifier: 108762477

GI number: 108762477

Start: 5353810

End: 5354268

Strand: Reverse

Name: ydiB [H]

Synonym: MXAN_4348

Alternate gene names: 108762477

Gene position: 5354268-5353810 (Counterclockwise)

Preceding gene: 108761093

Following gene: 108758974

Centisome position: 58.58

GC content: 68.19

Gene sequence:

>459_bases
GTGCGGACGGTACGGCTGGAGTCTCCCGAAGAGACACACCGGCTGGGGGTGCGCCTGGGGGAGTTGCTGGAGCCCGGTGA
CTTCGTGGGGCTGATTGGCGACCTGGGCGCGGGAAAGACGCACCTGGTGCGCGGAGTGGCGGACGGGGCGAACGTTCCTC
GCTCCGAGGTGGCGAGCCCCACGTTCGCGATTGTGTATCCGTATTCGGGACGCATCCCGCTGTACCACGCGGACCTGTAC
CGGCTGACGGACTACGACGACCTGTACGCCACGGGCTTCCTGGACCTGGAAGGCACCGAGAGCGCGATGCTGGTGGAGTG
GTTGGACAAGATTCCGCAGGCCGCGCCGCGCGACTACCTGCGCGTCACGCTGAAGCACGCGGGCGGCGAGGCACGCGTGC
TGATGGCGGAGGCGTTTGGTGTACGGCCCGCGGCGTTGCTCGATGCGTGGATGGGCTGA

Upstream 100 bases:

>100_bases
GCGGGCAACTGGGATTGGTTGCAGGGGACATCGTGGAGCAGGGGCTGTGCGAGGTGTGGCTGCGGTGGGAACGATGAGCA
CGGAAGCGTCGGCTGCGCGT

Downstream 100 bases:

>100_bases
CCCGAAGGGGCAGTGCCGGACTGCCACCGGCCTGGTCACGCCTCCCAGGGTGGTTTGGGCGCGTGCTGTTCGGAAATGTC
GGGGGTTTTAGCGGCGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MRTVRLESPEETHRLGVRLGELLEPGDFVGLIGDLGAGKTHLVRGVADGANVPRSEVASPTFAIVYPYSGRIPLYHADLY
RLTDYDDLYATGFLDLEGTESAMLVEWLDKIPQAAPRDYLRVTLKHAGGEARVLMAEAFGVRPAALLDAWMG

Sequences:

>Translated_152_residues
MRTVRLESPEETHRLGVRLGELLEPGDFVGLIGDLGAGKTHLVRGVADGANVPRSEVASPTFAIVYPYSGRIPLYHADLY
RLTDYDDLYATGFLDLEGTESAMLVEWLDKIPQAAPRDYLRVTLKHAGGEARVLMAEAFGVRPAALLDAWMG
>Mature_152_residues
MRTVRLESPEETHRLGVRLGELLEPGDFVGLIGDLGAGKTHLVRGVADGANVPRSEVASPTFAIVYPYSGRIPLYHADLY
RLTDYDDLYATGFLDLEGTESAMLVEWLDKIPQAAPRDYLRVTLKHAGGEARVLMAEAFGVRPAALLDAWMG

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=146, Percent_Identity=32.8767123287671, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 16640; Mature: 16640

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVRLESPEETHRLGVRLGELLEPGDFVGLIGDLGAGKTHLVRGVADGANVPRSEVASP
CCEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHEECCCCCCCCHHHHCCC
TFAIVYPYSGRIPLYHADLYRLTDYDDLYATGFLDLEGTESAMLVEWLDKIPQAAPRDYL
EEEEEECCCCCCEEEECCEEEECCCCCHHEEEEEECCCCCHHHHHHHHHHCCCCCCCHHE
RVTLKHAGGEARVLMAEAFGVRPAALLDAWMG
EEEEECCCCCEEEEEEHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MRTVRLESPEETHRLGVRLGELLEPGDFVGLIGDLGAGKTHLVRGVADGANVPRSEVASP
CCEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHEECCCCCCCCHHHHCCC
TFAIVYPYSGRIPLYHADLYRLTDYDDLYATGFLDLEGTESAMLVEWLDKIPQAAPRDYL
EEEEEECCCCCCEEEECCEEEECCCCCHHEEEEEECCCCCHHHHHHHHHHCCCCCCCHHE
RVTLKHAGGEARVLMAEAFGVRPAALLDAWMG
EEEEECCCCCEEEEEEHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]