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The map label for this gene is ydeP [C]

Identifier: 108758974

GI number: 108758974

Start: 5343918

End: 5346296

Strand: Reverse

Name: ydeP [C]

Synonym: MXAN_4341

Alternate gene names: 108758974

Gene position: 5346296-5343918 (Counterclockwise)

Preceding gene: 108762477

Following gene: 108758855

Centisome position: 58.49

GC content: 69.1

Gene sequence:

>2379_bases
ATGGACGACGGGAGCCGGAACGCACAGGGGCCTGGCGCGCGAGCGTCGTCCGCGCTCACGAAGGCAACGCCCTGCGCCCA
GCCTCCCGAGGAGGCCCGTGGCCCCTCCGTGGGGCCCATCGCGACGGTGGCGGGCGGCCTCCCCGCCGTCATCTCCGCCA
TGCGGCACGTCTACGGTGAAATGGACGTGGTGCGCGGGACGAAGCTGCTGCTCAAGGTGAACCAGAAGGAGGGCTTCGAC
TGCCCCGGCTGCGCGTGGCCCGACCCGGGACACCGCTCCATGGCGGAGTTCTGTGAGAACGGCGCCAAGGCGGTGGCGGA
AGAGGCCATGTCCGCGCGGGCGACGCCGGAGTTCTTCCGTCGATGGAGCGTGGCGGACCTCGCCCTCCAGACGGACCATT
GGCTGGGCAAGCAGGGCCGGCTGACGCACCCGATGGTGCTTCGCGAAGGCGCCACGCACTACGAGCCCCTGTCCTGGGAC
GAAGCCTTCGCGCTGGTGGCCGAGGAACTGAACGCGCTCGACACGCCAGACGCCGCGAGTTTCTACACCTCCGGGCGTAC
GAGCAACGAGGCGGCGTTCCTCTACCAGCTCTTCGTGCGGCAGTTCGGCACCAACAACCTGCCGGACTGCTCGAACATGT
GTCACGAGTCGAGCGGCTCCGCGCTCAATGAGACGGTGGGCATCGGCAAGGGCACTGTCACGCTGGAGGACTTCGACCAG
GCGGATGCCATCTTCGTCATCGGGCAGAACCCGGGGACGAACCATCCGCGCATGTTGTCGTCGCTCGAGGCCGCCGCGCG
ACGGGGCTGCCAGATTGTCAGCATCAACCCGCTGCCGGAGACGGGGCTCAACCGCTTCAAGCACCCGCAGGACGTGCTGC
ACCTCATCGGGCCCGGAACGGCGCTCAACTCCCTGTTCGTTCAGGTCCGCATCAACGGCGACGCCGCGCTGCTGCAGGGC
ATCGCCAAGGCGCTGTTCGAGATGGAGGACGCGAACCCTGGCTCGGTGGTGGCCAAGGGCTTCATCGACGACAAGACGCT
CGGCTTCGAGGCCTACGCGGCCCACATGCGCGCGGTGAAGTGGGAGGACGTGGAGGAGGGGAGTGGGGTGCCGCGCGCGC
AGGTGCTCGCGGCGGCGGAAATCCTCGCGCGCTCCGAGCGCACCATCTTCTGCTGGGCCATGGGGCTGACGCAGCACCGC
AACGGCGTGGCGTGCATTCAGGAAATCGTCAACCTGACGCTGCTGCGCGGCGCTATCGGCAAGCCGGGCGCGGGCCTGTG
CCCGGTGCGCGGTCACAGCAACGTGCAGGGCGACCGCACGATGGGCATCTGGGAGAAGCCGCCCGAGGCCCTGTTGACGG
CGCTGTCCCGGGAGTTCGGGTTCGAGCCGCCGCGGCACCACGGCATGGACGTGGTGGACACGCTGCACGCCATGCACGAC
GGCCGGGTGAAGGTGTTCTTCGCGCTCGGTGGCAACTTCCTCTCCGCCACGCCGGACACGGAGTTCACCGCCGAGGCCCT
GCGCCGCACGCGCCTCACCGTCCACGTGTCCACCAAGCTCAACCGCTCGCACCTGGTCCACGGACGGCGGGCGCTCATCC
TGCCGTGTCTGGGCCGCACCGAGCGCGACGTGCAGGCCGGCGGGGCCCAGTTCGTCACCGTGGAGAACTCCATGGGCGTG
GTGTCGTCTTCGCGGGGCTCGGTGGCGCCCGCGTCGGAGCACCTGCTCAGCGAACCCGTCATCGTCGCCCGGCTGGCGAC
GGCGGTGCTGGGGGCGCGCTCTCGCGTGCCCTGGCTGTCGCTGGTGGAGGACTACGACCGCATCCGTGAGCAGATTTCGC
GCGTCATCCCCGGCTTCGATGACTTCAATCGCCGCGTGCGGGAGCCGGGCGGCTTCGCGCTGCCGAATGGTCCGCGTGAG
GGACGCTTCACCACGAAGAGTGGCAAGGCTCACTTCACGGTGCATGCGCTACAGCCCATTGCCCTGGAGCCGGGACAGCT
CCTGATGATGACGATTCGCACGCATGACCAGTTCAACACGACGGTGTACGGGCTGGATGACCGCTACCGCGGCATCCGCA
ATGGCCGCCGGGTGGTGTTGCTGCATCCCGCCGACATGAAGGCGCAGGGGCTGGCGGCTGACCAGCTTGTCGACCTGCGG
AGCCACTTCGAAGGCGAGACGCGGCTGGCGCGTGGCTTCCGCGTGGTGCCGTACAACATCCCGCGCAGGTGCGCGGCCAC
CTACTTCCCCGAGGCCAACGTCCTCGTCCCCGTGAACAGCTTCGCGGAGAAGAGCCGCACGCCCACGTCGAAGTCGGTGG
TCATCAGCATCACCCCGGCCGGAGAAGCGCGGGCCCTGCCCGCTGGCGCGGTGGCATGA

Upstream 100 bases:

>100_bases
GCCAGTCGTTCCATGAGCATTCCCGCGCGGCCAGAGCGCGGTAGAGTCCACAGTCGCGACCGGCCAGCCAGCCAGCCGCG
CGATGCCTGGAGGGAGTGCC

Downstream 100 bases:

>100_bases
GGCGCGTGAGAGAGCATGCAGCCCGTCAATGAAACCGGGTGGCCGGAGTCGCTCCGGCCCCTCTATGAGACGGTGACGGG
GACGCCCGCGGCGGAGGCCA

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 792; Mature: 792

Protein sequence:

>792_residues
MDDGSRNAQGPGARASSALTKATPCAQPPEEARGPSVGPIATVAGGLPAVISAMRHVYGEMDVVRGTKLLLKVNQKEGFD
CPGCAWPDPGHRSMAEFCENGAKAVAEEAMSARATPEFFRRWSVADLALQTDHWLGKQGRLTHPMVLREGATHYEPLSWD
EAFALVAEELNALDTPDAASFYTSGRTSNEAAFLYQLFVRQFGTNNLPDCSNMCHESSGSALNETVGIGKGTVTLEDFDQ
ADAIFVIGQNPGTNHPRMLSSLEAAARRGCQIVSINPLPETGLNRFKHPQDVLHLIGPGTALNSLFVQVRINGDAALLQG
IAKALFEMEDANPGSVVAKGFIDDKTLGFEAYAAHMRAVKWEDVEEGSGVPRAQVLAAAEILARSERTIFCWAMGLTQHR
NGVACIQEIVNLTLLRGAIGKPGAGLCPVRGHSNVQGDRTMGIWEKPPEALLTALSREFGFEPPRHHGMDVVDTLHAMHD
GRVKVFFALGGNFLSATPDTEFTAEALRRTRLTVHVSTKLNRSHLVHGRRALILPCLGRTERDVQAGGAQFVTVENSMGV
VSSSRGSVAPASEHLLSEPVIVARLATAVLGARSRVPWLSLVEDYDRIREQISRVIPGFDDFNRRVREPGGFALPNGPRE
GRFTTKSGKAHFTVHALQPIALEPGQLLMMTIRTHDQFNTTVYGLDDRYRGIRNGRRVVLLHPADMKAQGLAADQLVDLR
SHFEGETRLARGFRVVPYNIPRRCAATYFPEANVLVPVNSFAEKSRTPTSKSVVISITPAGEARALPAGAVA

Sequences:

>Translated_792_residues
MDDGSRNAQGPGARASSALTKATPCAQPPEEARGPSVGPIATVAGGLPAVISAMRHVYGEMDVVRGTKLLLKVNQKEGFD
CPGCAWPDPGHRSMAEFCENGAKAVAEEAMSARATPEFFRRWSVADLALQTDHWLGKQGRLTHPMVLREGATHYEPLSWD
EAFALVAEELNALDTPDAASFYTSGRTSNEAAFLYQLFVRQFGTNNLPDCSNMCHESSGSALNETVGIGKGTVTLEDFDQ
ADAIFVIGQNPGTNHPRMLSSLEAAARRGCQIVSINPLPETGLNRFKHPQDVLHLIGPGTALNSLFVQVRINGDAALLQG
IAKALFEMEDANPGSVVAKGFIDDKTLGFEAYAAHMRAVKWEDVEEGSGVPRAQVLAAAEILARSERTIFCWAMGLTQHR
NGVACIQEIVNLTLLRGAIGKPGAGLCPVRGHSNVQGDRTMGIWEKPPEALLTALSREFGFEPPRHHGMDVVDTLHAMHD
GRVKVFFALGGNFLSATPDTEFTAEALRRTRLTVHVSTKLNRSHLVHGRRALILPCLGRTERDVQAGGAQFVTVENSMGV
VSSSRGSVAPASEHLLSEPVIVARLATAVLGARSRVPWLSLVEDYDRIREQISRVIPGFDDFNRRVREPGGFALPNGPRE
GRFTTKSGKAHFTVHALQPIALEPGQLLMMTIRTHDQFNTTVYGLDDRYRGIRNGRRVVLLHPADMKAQGLAADQLVDLR
SHFEGETRLARGFRVVPYNIPRRCAATYFPEANVLVPVNSFAEKSRTPTSKSVVISITPAGEARALPAGAVA
>Mature_792_residues
MDDGSRNAQGPGARASSALTKATPCAQPPEEARGPSVGPIATVAGGLPAVISAMRHVYGEMDVVRGTKLLLKVNQKEGFD
CPGCAWPDPGHRSMAEFCENGAKAVAEEAMSARATPEFFRRWSVADLALQTDHWLGKQGRLTHPMVLREGATHYEPLSWD
EAFALVAEELNALDTPDAASFYTSGRTSNEAAFLYQLFVRQFGTNNLPDCSNMCHESSGSALNETVGIGKGTVTLEDFDQ
ADAIFVIGQNPGTNHPRMLSSLEAAARRGCQIVSINPLPETGLNRFKHPQDVLHLIGPGTALNSLFVQVRINGDAALLQG
IAKALFEMEDANPGSVVAKGFIDDKTLGFEAYAAHMRAVKWEDVEEGSGVPRAQVLAAAEILARSERTIFCWAMGLTQHR
NGVACIQEIVNLTLLRGAIGKPGAGLCPVRGHSNVQGDRTMGIWEKPPEALLTALSREFGFEPPRHHGMDVVDTLHAMHD
GRVKVFFALGGNFLSATPDTEFTAEALRRTRLTVHVSTKLNRSHLVHGRRALILPCLGRTERDVQAGGAQFVTVENSMGV
VSSSRGSVAPASEHLLSEPVIVARLATAVLGARSRVPWLSLVEDYDRIREQISRVIPGFDDFNRRVREPGGFALPNGPRE
GRFTTKSGKAHFTVHALQPIALEPGQLLMMTIRTHDQFNTTVYGLDDRYRGIRNGRRVVLLHPADMKAQGLAADQLVDLR
SHFEGETRLARGFRVVPYNIPRRCAATYFPEANVLVPVNSFAEKSRTPTSKSVVISITPAGEARALPAGAVA

Specific function: Unknown

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=748, Percent_Identity=45.1871657754011, Blast_Score=651, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=381, Percent_Identity=30.1837270341207, Blast_Score=161, Evalue=2e-40,
Organism=Escherichia coli, GI1788534, Length=401, Percent_Identity=25.1870324189526, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 85785; Mature: 85785

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00075 DHFR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDGSRNAQGPGARASSALTKATPCAQPPEEARGPSVGPIATVAGGLPAVISAMRHVYGE
CCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHCC
MDVVRGTKLLLKVNQKEGFDCPGCAWPDPGHRSMAEFCENGAKAVAEEAMSARATPEFFR
HHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RWSVADLALQTDHWLGKQGRLTHPMVLREGATHYEPLSWDEAFALVAEELNALDTPDAAS
HCCHHHHEEECCHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
FYTSGRTSNEAAFLYQLFVRQFGTNNLPDCSNMCHESSGSALNETVGIGKGTVTLEDFDQ
HCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHCCCCCEEEECCCCC
ADAIFVIGQNPGTNHPRMLSSLEAAARRGCQIVSINPLPETGLNRFKHPQDVLHLIGPGT
CCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCHHHHHHHHCCCC
ALNSLFVQVRINGDAALLQGIAKALFEMEDANPGSVVAKGFIDDKTLGFEAYAAHMRAVK
CCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCC
WEDVEEGSGVPRAQVLAAAEILARSERTIFCWAMGLTQHRNGVACIQEIVNLTLLRGAIG
CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHCCC
KPGAGLCPVRGHSNVQGDRTMGIWEKPPEALLTALSREFGFEPPRHHGMDVVDTLHAMHD
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
GRVKVFFALGGNFLSATPDTEFTAEALRRTRLTVHVSTKLNRSHLVHGRRALILPCLGRT
CCEEEEEEECCCEEECCCCCHHHHHHHHHCEEEEEEECCCCHHHHHCCCCEEEEECCCCC
ERDVQAGGAQFVTVENSMGVVSSSRGSVAPASEHLLSEPVIVARLATAVLGARSRVPWLS
CHHHHCCCEEEEEEECCCCCEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHH
LVEDYDRIREQISRVIPGFDDFNRRVREPGGFALPNGPREGRFTTKSGKAHFTVHALQPI
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCE
ALEPGQLLMMTIRTHDQFNTTVYGLDDRYRGIRNGRRVVLLHPADMKAQGLAADQLVDLR
EECCCCEEEEEEECCCCCCCEEEECCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHH
SHFEGETRLARGFRVVPYNIPRRCAATYFPEANVLVPVNSFAEKSRTPTSKSVVISITPA
HHCCCCHHHHCCCEEECCCCCHHHHHHCCCCCCEEEECHHHHHHCCCCCCCEEEEEEECC
GEARALPAGAVA
CCCCCCCCCCCC
>Mature Secondary Structure
MDDGSRNAQGPGARASSALTKATPCAQPPEEARGPSVGPIATVAGGLPAVISAMRHVYGE
CCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHCC
MDVVRGTKLLLKVNQKEGFDCPGCAWPDPGHRSMAEFCENGAKAVAEEAMSARATPEFFR
HHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RWSVADLALQTDHWLGKQGRLTHPMVLREGATHYEPLSWDEAFALVAEELNALDTPDAAS
HCCHHHHEEECCHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
FYTSGRTSNEAAFLYQLFVRQFGTNNLPDCSNMCHESSGSALNETVGIGKGTVTLEDFDQ
HCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHCCCCCEEEECCCCC
ADAIFVIGQNPGTNHPRMLSSLEAAARRGCQIVSINPLPETGLNRFKHPQDVLHLIGPGT
CCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCHHHHHHHHCCCC
ALNSLFVQVRINGDAALLQGIAKALFEMEDANPGSVVAKGFIDDKTLGFEAYAAHMRAVK
CCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCC
WEDVEEGSGVPRAQVLAAAEILARSERTIFCWAMGLTQHRNGVACIQEIVNLTLLRGAIG
CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHCCC
KPGAGLCPVRGHSNVQGDRTMGIWEKPPEALLTALSREFGFEPPRHHGMDVVDTLHAMHD
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
GRVKVFFALGGNFLSATPDTEFTAEALRRTRLTVHVSTKLNRSHLVHGRRALILPCLGRT
CCEEEEEEECCCEEECCCCCHHHHHHHHHCEEEEEEECCCCHHHHHCCCCEEEEECCCCC
ERDVQAGGAQFVTVENSMGVVSSSRGSVAPASEHLLSEPVIVARLATAVLGARSRVPWLS
CHHHHCCCEEEEEEECCCCCEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHH
LVEDYDRIREQISRVIPGFDDFNRRVREPGGFALPNGPREGRFTTKSGKAHFTVHALQPI
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCE
ALEPGQLLMMTIRTHDQFNTTVYGLDDRYRGIRNGRRVVLLHPADMKAQGLAADQLVDLR
EECCCCEEEEEEECCCCCCCEEEECCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHH
SHFEGETRLARGFRVVPYNIPRRCAATYFPEANVLVPVNSFAEKSRTPTSKSVVISITPA
HHCCCCHHHHCCCEEECCCCCHHHHHHCCCCCCEEEECHHHHHHCCCCCCCEEEEEEECC
GEARALPAGAVA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]