| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762455
Identifier: 108762455
GI number: 108762455
Start: 271678
End: 273312
Strand: Reverse
Name: 108762455
Synonym: MXAN_0224
Alternate gene names: NA
Gene position: 273312-271678 (Counterclockwise)
Preceding gene: 108759887
Following gene: 108763021
Centisome position: 2.99
GC content: 68.13
Gene sequence:
>1635_bases ATGCGTCGCTCGCCATGGTCGGCGTCGATGAGGGCGGTACGCTCAGGGGCCAGCGCGGCACGCCGGGCCAGCCAGTCATG GACGATGGGCATGGTATCCACGCTAGCTGAACCCGGCGGCATCGCGTCGGCTCAGGAAAGGGAAGCGGGCAAGCAACCCG CCTCACCGTCACCTCCCCACCCGCTCGGAGGGCCACACGACATGCAGCCCCCATCCCCCCCATGGCTGCTCGTCGCAATG CTCCTCCTGCTGTGTGCGGAAGCAGGAGCCGCATCCACGCGGCTCCCGCGCACTGAACGCACACGCCGCGCCAAAGCCTC CGCCACGCTGGAGCAGTCACTCCTCGCGGCCGTGCGGGACGCAGGCTTTGACCAGGTGCTCGACTTCAAGCGCGACGGTG CGCGCATCGCCCACGCACCCTACGTCGACGTCGCCGTCATCGAACTGGACGCCCGGAGCCGTCCCACGGCCGCCGCCAAC GTGCTGCTGTCACGCGACTACCCAACTGGCGCCATCGTCCCCATCGACGTCGAAACGCTGGGCACCACGGCAGTGCGTTA CACAGCGTGGAATCTGGACCGCTGGGACAGCGGCGCCCACGATGCCACACCCACGGAGCCCCTGGTCCCCGGACGAGACA AAGCGCCGCTCCGCTTCATGGCGCCCTACCCCGCCTCGCTCTTCAAGCTGCTCATCGCCTTTCGCGTCCTCCGGTGGGTG GACCAGGGTCACCTCACGTGGGACCAGCCCTGGCGCTTCCTCCGAGACACCGAGGACAAGGGCACGCGCCCGATACGTGA CTGGCTGGAGCCGATGGTGACCGAATCGGACAACACCGCCACCGAGGCCCTGGTGAAGCTGCTCCACGAACAAGGCGCGA TGGCGAGCCTCAACGCGGAGCTGGCGGCGCTGGGCCTGGACACGCTGCAAGTCCATGGCACGTCCCCGGTGACAGGCCGG AGCTGGAACCCCGGCCAGATTCACATGACAGCGCTGGATACAGCGCGGCTGCTGCTGCTCATCGAAGGAGGCCCCGGTGT CCTCTGGCGCACCGCATCGGGCCGCGATGTGACGGCGAAGGAACTCTCTGGCGCGTCCAGAACCCACCTCCAATCCCTAC TCGCCGACCAGGCCCTGCACGAAGCGCTGTCATCCACGCTGCTGTGCGGAGATGCGCGCGCGGAACCAGGCATCCCCGCG GCCGTCCCTACTCGATGGGTGAACTCCGAGGACGGCACCGTAACGGCGGCGGAGACCGCCTTCGGCCGGGACACGCGCCC CTGCAACGCGACGGCGGAAGTCACATTCCTCCATAAGACAGGGCTGACGGAGAACTACGGCAGCGACGGCGGCATCGTCC GCTCCCTGCCCGGCAAACCCTGGCGCCGATACATCGTCGTGTTCCTGTCCAACCTGGGCTACCGCTACTACGACGCGAAA GTGGCCGACGCGGCGGACTTCGCGAAGGGCGAAGACGGCTTCCCTTACGTCAGCACGTCCATCAGCTACACGCAGCGAAT CCCTGCGCTGGGCCGCCAAATCGACGCGATGATGCGGGAGCGTCAGCGCGCACGCCCCCAGAGTCCTCCTGCGAAGGACG CCGCTCCCCAACAGGCGCCTCGGCCCGCTCGATAG
Upstream 100 bases:
>100_bases GTAGGCGAGCACCGCGACACGGTCCCCTCGCCCCACACCCAGCGCATGGTGGAGGAAAGCGGCGGTACGCGAAGCCGAAT CGTTCCATTCACGAAAGGAG
Downstream 100 bases:
>100_bases AATGGGGCTTTCGGCCGTGCCGTCGCGTGCTTGAAAGTACGTGCCGGGACACACAGCACGGCCTGAATGTGCGTCACCCC AGGCACACAGAAAGTCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
>544_residues MRRSPWSASMRAVRSGASAARRASQSWTMGMVSTLAEPGGIASAQEREAGKQPASPSPPHPLGGPHDMQPPSPPWLLVAM LLLLCAEAGAASTRLPRTERTRRAKASATLEQSLLAAVRDAGFDQVLDFKRDGARIAHAPYVDVAVIELDARSRPTAAAN VLLSRDYPTGAIVPIDVETLGTTAVRYTAWNLDRWDSGAHDATPTEPLVPGRDKAPLRFMAPYPASLFKLLIAFRVLRWV DQGHLTWDQPWRFLRDTEDKGTRPIRDWLEPMVTESDNTATEALVKLLHEQGAMASLNAELAALGLDTLQVHGTSPVTGR SWNPGQIHMTALDTARLLLLIEGGPGVLWRTASGRDVTAKELSGASRTHLQSLLADQALHEALSSTLLCGDARAEPGIPA AVPTRWVNSEDGTVTAAETAFGRDTRPCNATAEVTFLHKTGLTENYGSDGGIVRSLPGKPWRRYIVVFLSNLGYRYYDAK VADAADFAKGEDGFPYVSTSISYTQRIPALGRQIDAMMRERQRARPQSPPAKDAAPQQAPRPAR
Sequences:
>Translated_544_residues MRRSPWSASMRAVRSGASAARRASQSWTMGMVSTLAEPGGIASAQEREAGKQPASPSPPHPLGGPHDMQPPSPPWLLVAM LLLLCAEAGAASTRLPRTERTRRAKASATLEQSLLAAVRDAGFDQVLDFKRDGARIAHAPYVDVAVIELDARSRPTAAAN VLLSRDYPTGAIVPIDVETLGTTAVRYTAWNLDRWDSGAHDATPTEPLVPGRDKAPLRFMAPYPASLFKLLIAFRVLRWV DQGHLTWDQPWRFLRDTEDKGTRPIRDWLEPMVTESDNTATEALVKLLHEQGAMASLNAELAALGLDTLQVHGTSPVTGR SWNPGQIHMTALDTARLLLLIEGGPGVLWRTASGRDVTAKELSGASRTHLQSLLADQALHEALSSTLLCGDARAEPGIPA AVPTRWVNSEDGTVTAAETAFGRDTRPCNATAEVTFLHKTGLTENYGSDGGIVRSLPGKPWRRYIVVFLSNLGYRYYDAK VADAADFAKGEDGFPYVSTSISYTQRIPALGRQIDAMMRERQRARPQSPPAKDAAPQQAPRPAR >Mature_544_residues MRRSPWSASMRAVRSGASAARRASQSWTMGMVSTLAEPGGIASAQEREAGKQPASPSPPHPLGGPHDMQPPSPPWLLVAM LLLLCAEAGAASTRLPRTERTRRAKASATLEQSLLAAVRDAGFDQVLDFKRDGARIAHAPYVDVAVIELDARSRPTAAAN VLLSRDYPTGAIVPIDVETLGTTAVRYTAWNLDRWDSGAHDATPTEPLVPGRDKAPLRFMAPYPASLFKLLIAFRVLRWV DQGHLTWDQPWRFLRDTEDKGTRPIRDWLEPMVTESDNTATEALVKLLHEQGAMASLNAELAALGLDTLQVHGTSPVTGR SWNPGQIHMTALDTARLLLLIEGGPGVLWRTASGRDVTAKELSGASRTHLQSLLADQALHEALSSTLLCGDARAEPGIPA AVPTRWVNSEDGTVTAAETAFGRDTRPCNATAEVTFLHKTGLTENYGSDGGIVRSLPGKPWRRYIVVFLSNLGYRYYDAK VADAADFAKGEDGFPYVSTSISYTQRIPALGRQIDAMMRERQRARPQSPPAKDAAPQQAPRPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59016; Mature: 59016
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00697 DNA_LIGASE_A1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSPWSASMRAVRSGASAARRASQSWTMGMVSTLAEPGGIASAQEREAGKQPASPSPPH CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCC PLGGPHDMQPPSPPWLLVAMLLLLCAEAGAASTRLPRTERTRRAKASATLEQSLLAAVRD CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AGFDQVLDFKRDGARIAHAPYVDVAVIELDARSRPTAAANVLLSRDYPTGAIVPIDVETL CCHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCCCHHHHEEEECCCCCCCEEEEEHHHC GTTAVRYTAWNLDRWDSGAHDATPTEPLVPGRDKAPLRFMAPYPASLFKLLIAFRVLRWV CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH DQGHLTWDQPWRFLRDTEDKGTRPIRDWLEPMVTESDNTATEALVKLLHEQGAMASLNAE HCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHCCCH LAALGLDTLQVHGTSPVTGRSWNPGQIHMTALDTARLLLLIEGGPGVLWRTASGRDVTAK HHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCEEEECCCCCCCCHH ELSGASRTHLQSLLADQALHEALSSTLLCGDARAEPGIPAAVPTRWVNSEDGTVTAAETA HHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH FGRDTRPCNATAEVTFLHKTGLTENYGSDGGIVRSLPGKPWRRYIVVFLSNLGYRYYDAK CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCEEECCH VADAADFAKGEDGFPYVSTSISYTQRIPALGRQIDAMMRERQRARPQSPPAKDAAPQQAP HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC RPAR CCCC >Mature Secondary Structure MRRSPWSASMRAVRSGASAARRASQSWTMGMVSTLAEPGGIASAQEREAGKQPASPSPPH CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCC PLGGPHDMQPPSPPWLLVAMLLLLCAEAGAASTRLPRTERTRRAKASATLEQSLLAAVRD CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AGFDQVLDFKRDGARIAHAPYVDVAVIELDARSRPTAAANVLLSRDYPTGAIVPIDVETL CCHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCCCHHHHEEEECCCCCCCEEEEEHHHC GTTAVRYTAWNLDRWDSGAHDATPTEPLVPGRDKAPLRFMAPYPASLFKLLIAFRVLRWV CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH DQGHLTWDQPWRFLRDTEDKGTRPIRDWLEPMVTESDNTATEALVKLLHEQGAMASLNAE HCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHCCCH LAALGLDTLQVHGTSPVTGRSWNPGQIHMTALDTARLLLLIEGGPGVLWRTASGRDVTAK HHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCEEEECCCCCCCCHH ELSGASRTHLQSLLADQALHEALSSTLLCGDARAEPGIPAAVPTRWVNSEDGTVTAAETA HHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH FGRDTRPCNATAEVTFLHKTGLTENYGSDGGIVRSLPGKPWRRYIVVFLSNLGYRYYDAK CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCEEECCH VADAADFAKGEDGFPYVSTSISYTQRIPALGRQIDAMMRERQRARPQSPPAKDAAPQQAP HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC RPAR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA