| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762301
Identifier: 108762301
GI number: 108762301
Start: 3896950
End: 3898260
Strand: Reverse
Name: 108762301
Synonym: MXAN_3353
Alternate gene names: NA
Gene position: 3898260-3896950 (Counterclockwise)
Preceding gene: 108763832
Following gene: 108762754
Centisome position: 42.65
GC content: 63.08
Gene sequence:
>1311_bases ATGGCCGACAACCTGAAAATCACCCAGGCGCAGGACGAGAACACCAACGAGTTCGGCCGCGAGCACAACGAGAAGCTCCA GGGCCTGGCGCGCTCGCTGGTGGCCGGCCTGTACATGCTGGTGCGCTCGGTGAAGATGTATGACCCGGAGAACGCGGTCT TCCAGAAGCCGCTGCACCAGCTCCAGGACATCATCAATCAAATCATCAGCAAGGAAGGCCGCCTGGAGCTCACGGGCGTC AAGGAGTCGTTCTACCTGAACGGCATGCTGGTGAAGGTGGACCTCAACTCCATCGAGAACCAGCGATACCTGCTGACGGA GCTGCGCTCGAAGGACGTGGGTGGCTTCACGCTCACCAAGCCCGTCACCGTTCCGGAGCTGAAGAACTTCATCTGGATCT TCAGCAAGGAGCAGACGACCGCGTCCGAAGAGGACGGCCTGTCCAACCGCAAGCTGCTCAACATGCGGGTGGCCAAGTTC TCCAAGCTGAAGGAGAAGCTGAACAAGGACCTGGACAACCCGGGCGACCAGAAGGTGGACCGCAAGAAGTACGCGATGAC CATCTACGCGCGCGCCGTGTTCTTCCTCACGAAGTACCTGGAGTCGGTGCGCGCCGGGAAGCCCATCAACGCCTCCAAGG CGCTGCGCCTGGTGCAGGACTTCGTCGACATCTCCTACGAGCAGCGGACGCACTTCCTGGGCATGACGACCATGCGGCGC GAGGACGACTACCTCGTGTACCACCAGGTCAACGTGTGCCTCATGAGCGTCGTCTTCGGCGCGGAGCTGGGGCTGACGAA GCCGCAACTGCGCGACCTGGGCTACATCGCCCTCTTCCACGACGCCGGCATGGCCACGCTGTCGGAGGAGCTGTCGACGA AGCGAGGCGCGCTGACGCCCGAGGAGAAGCAGACGGTGCAGCGCGCGCCGCTCATCTCCGTGCGCAACATCCTGATGGAG AAGGGCTTCAGCCGCTCCACGCTGCTGCGCGTGGTGACGACGTTCGAGCACAAGACGGACTTCGGTACCGCCGTGCGCGA CTCCCGCGGCAACATCCAGATGATCATCCCGAAGACGAACCTCGGGGTGTACGCGAAGATCATCGCCATCTGCGACGCGT ACGACGCCCTCACCTCCAAGCGCCCGTACCGGGATGCCTACGGCCCGGAGGTGGCGCTGATGCTGATGTGGTCGGAGATG CGGAACAAGTTCGACCCGGAGCTGCTGTCCGTCTTCATGCGGGTGATGGCCATCCAGCCCGTGAAGGTGCTGTCCAAGCG CCAGCAGTCGCTCAGCGTGTCCGGCCTGTAG
Upstream 100 bases:
>100_bases AACCAGCCGTTGGAGGTCCTCACCTCGGCTCGCAAGGCGATGTACCAGACGAAGAAGGCGCTCTTCGGAGACTCGGCGCT GTCGGAGGAGGCATAGGCGT
Downstream 100 bases:
>100_bases TCCGCTTCGAGCCGCCCGCCGCCTTCCGAGGCGCGGGCTGCTTTCGGGTGGCGACCGGGGCCTCTGGCGGCGCGGGGACG GTGGCCCGGAGCAGCGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MADNLKITQAQDENTNEFGREHNEKLQGLARSLVAGLYMLVRSVKMYDPENAVFQKPLHQLQDIINQIISKEGRLELTGV KESFYLNGMLVKVDLNSIENQRYLLTELRSKDVGGFTLTKPVTVPELKNFIWIFSKEQTTASEEDGLSNRKLLNMRVAKF SKLKEKLNKDLDNPGDQKVDRKKYAMTIYARAVFFLTKYLESVRAGKPINASKALRLVQDFVDISYEQRTHFLGMTTMRR EDDYLVYHQVNVCLMSVVFGAELGLTKPQLRDLGYIALFHDAGMATLSEELSTKRGALTPEEKQTVQRAPLISVRNILME KGFSRSTLLRVVTTFEHKTDFGTAVRDSRGNIQMIIPKTNLGVYAKIIAICDAYDALTSKRPYRDAYGPEVALMLMWSEM RNKFDPELLSVFMRVMAIQPVKVLSKRQQSLSVSGL
Sequences:
>Translated_436_residues MADNLKITQAQDENTNEFGREHNEKLQGLARSLVAGLYMLVRSVKMYDPENAVFQKPLHQLQDIINQIISKEGRLELTGV KESFYLNGMLVKVDLNSIENQRYLLTELRSKDVGGFTLTKPVTVPELKNFIWIFSKEQTTASEEDGLSNRKLLNMRVAKF SKLKEKLNKDLDNPGDQKVDRKKYAMTIYARAVFFLTKYLESVRAGKPINASKALRLVQDFVDISYEQRTHFLGMTTMRR EDDYLVYHQVNVCLMSVVFGAELGLTKPQLRDLGYIALFHDAGMATLSEELSTKRGALTPEEKQTVQRAPLISVRNILME KGFSRSTLLRVVTTFEHKTDFGTAVRDSRGNIQMIIPKTNLGVYAKIIAICDAYDALTSKRPYRDAYGPEVALMLMWSEM RNKFDPELLSVFMRVMAIQPVKVLSKRQQSLSVSGL >Mature_435_residues ADNLKITQAQDENTNEFGREHNEKLQGLARSLVAGLYMLVRSVKMYDPENAVFQKPLHQLQDIINQIISKEGRLELTGVK ESFYLNGMLVKVDLNSIENQRYLLTELRSKDVGGFTLTKPVTVPELKNFIWIFSKEQTTASEEDGLSNRKLLNMRVAKFS KLKEKLNKDLDNPGDQKVDRKKYAMTIYARAVFFLTKYLESVRAGKPINASKALRLVQDFVDISYEQRTHFLGMTTMRRE DDYLVYHQVNVCLMSVVFGAELGLTKPQLRDLGYIALFHDAGMATLSEELSTKRGALTPEEKQTVQRAPLISVRNILMEK GFSRSTLLRVVTTFEHKTDFGTAVRDSRGNIQMIIPKTNLGVYAKIIAICDAYDALTSKRPYRDAYGPEVALMLMWSEMR NKFDPELLSVFMRVMAIQPVKVLSKRQQSLSVSGL
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49688; Mature: 49557
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNLKITQAQDENTNEFGREHNEKLQGLARSLVAGLYMLVRSVKMYDPENAVFQKPLHQ CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LQDIINQIISKEGRLELTGVKESFYLNGMLVKVDLNSIENQRYLLTELRSKDVGGFTLTK HHHHHHHHHCCCCCEEEEECCCEEEECCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEC PVTVPELKNFIWIFSKEQTTASEEDGLSNRKLLNMRVAKFSKLKEKLNKDLDNPGDQKVD CCCHHHHHCEEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH RKKYAMTIYARAVFFLTKYLESVRAGKPINASKALRLVQDFVDISYEQRTHFLGMTTMRR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCHHHCCC EDDYLVYHQVNVCLMSVVFGAELGLTKPQLRDLGYIALFHDAGMATLSEELSTKRGALTP CCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCC EEKQTVQRAPLISVRNILMEKGFSRSTLLRVVTTFEHKTDFGTAVRDSRGNIQMIIPKTN HHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCC LGVYAKIIAICDAYDALTSKRPYRDAYGPEVALMLMWSEMRNKFDPELLSVFMRVMAIQP CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCH VKVLSKRQQSLSVSGL HHHHHHHHHHCCCCCC >Mature Secondary Structure ADNLKITQAQDENTNEFGREHNEKLQGLARSLVAGLYMLVRSVKMYDPENAVFQKPLHQ CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LQDIINQIISKEGRLELTGVKESFYLNGMLVKVDLNSIENQRYLLTELRSKDVGGFTLTK HHHHHHHHHCCCCCEEEEECCCEEEECCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEC PVTVPELKNFIWIFSKEQTTASEEDGLSNRKLLNMRVAKFSKLKEKLNKDLDNPGDQKVD CCCHHHHHCEEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH RKKYAMTIYARAVFFLTKYLESVRAGKPINASKALRLVQDFVDISYEQRTHFLGMTTMRR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCHHHCCC EDDYLVYHQVNVCLMSVVFGAELGLTKPQLRDLGYIALFHDAGMATLSEELSTKRGALTP CCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCC EEKQTVQRAPLISVRNILMEKGFSRSTLLRVVTTFEHKTDFGTAVRDSRGNIQMIIPKTN HHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCC LGVYAKIIAICDAYDALTSKRPYRDAYGPEVALMLMWSEMRNKFDPELLSVFMRVMAIQP CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCH VKVLSKRQQSLSVSGL HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]