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The map label for this gene is yebA [H]

Identifier: 108762233

GI number: 108762233

Start: 6658759

End: 6659676

Strand: Reverse

Name: yebA [H]

Synonym: MXAN_5348

Alternate gene names: 108762233

Gene position: 6659676-6658759 (Counterclockwise)

Preceding gene: 108760466

Following gene: 108759419

Centisome position: 72.86

GC content: 66.67

Gene sequence:

>918_bases
GTGGCGAAAAAGTCCTTCACACTGATGGTGATTCCGGACCATGACGCTCCGGTCAAGCGGTACACCATCCAGCGGTCCTT
TCTCACTCAGGTGGGGATGGGACTGATGCTCGTGGTGGGACTGGGCGTGGGTGCGAGCGTGCACTACTTCCAGGTGGCCG
CGGACGCCTCCGAGAACCGCATCCTTCGCGAAGAGAACCTGACGCTGCGCTCGCAGCTCAAGTCGGTGCGTGAGCGCATC
GAGCACATCGGCTCCACGTTGGACCGGGTGGAGCGCTTCGACCAGAAGCTGCGCGCGGTGACGCTGCTGTCCGATCCTCA
GCGCAACCTGGCCATGGGGCCGACGGAGCCCGAGGCGGGCACGTCCGCGCCTGCCACGGACACGCAATTCACGCAGCTGA
CCTCCACGGAGACGCCCAAGGCGCTGATGGGCCGGCTGGACCGGTTGAGCGCGGAGGCCACCCGCCAGGAGCAGAGCCTC
CAGGAGTTGCAGGCCTACTTCCAGGACCAGAAGTCGCTGCTGGCCTCCACTCCGTCCATCTGGCCCGCGCGCGGCTGGGT
GACGAGTGATTTCGGTTCGCGCCTGGACCCGTACACCGCGGACCGCGTCATGCACGGCGGCATGGACATCGCGGCGCCGC
ACGGCAAGGAAGTCTTCGCGCCGTCGGACGGCACAGTGGTGTTCGCGGGCCTGGAGGGCGGCTACGGCAACGTGCTCGTC
ATCGACCATGGCTACGGCATCAAGACGCGCTACGGCCACCTGTCGAAGATGCTGGTGAAGGCCGGCGACAAGGTGAAGCG
CGGCATGCACATCGCCGCCGTCGGCAACACCGGCCGCTCCACGGGTCCGCACCTCCACTACGAGGTCCGCGTCAACGGCA
TCGGGCAGAATCCCCGCAAGTTCATCCTCGAGGAGTAG

Upstream 100 bases:

>100_bases
GACGAAGCGGGAGGGGTAGGCGGCGGGGGGAGGTGTTGCGCGAGAGCAAGCGACTTAGCTTGCTGCGCCAGTAGTCCCAC
GCAAGCAGGGGAGCTGTCCC

Downstream 100 bases:

>100_bases
CCGGCGCGGAGGGATGGCGTCTCGGTGGTTCGTCGAGGCGCCTCGCTGCGGACGGAAGGAGCGCGCTCCCGTGGAAGCCC
GAAGGGCTCCGGGAGCGGGT

Product: M23 peptidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MAKKSFTLMVIPDHDAPVKRYTIQRSFLTQVGMGLMLVVGLGVGASVHYFQVAADASENRILREENLTLRSQLKSVRERI
EHIGSTLDRVERFDQKLRAVTLLSDPQRNLAMGPTEPEAGTSAPATDTQFTQLTSTETPKALMGRLDRLSAEATRQEQSL
QELQAYFQDQKSLLASTPSIWPARGWVTSDFGSRLDPYTADRVMHGGMDIAAPHGKEVFAPSDGTVVFAGLEGGYGNVLV
IDHGYGIKTRYGHLSKMLVKAGDKVKRGMHIAAVGNTGRSTGPHLHYEVRVNGIGQNPRKFILEE

Sequences:

>Translated_305_residues
MAKKSFTLMVIPDHDAPVKRYTIQRSFLTQVGMGLMLVVGLGVGASVHYFQVAADASENRILREENLTLRSQLKSVRERI
EHIGSTLDRVERFDQKLRAVTLLSDPQRNLAMGPTEPEAGTSAPATDTQFTQLTSTETPKALMGRLDRLSAEATRQEQSL
QELQAYFQDQKSLLASTPSIWPARGWVTSDFGSRLDPYTADRVMHGGMDIAAPHGKEVFAPSDGTVVFAGLEGGYGNVLV
IDHGYGIKTRYGHLSKMLVKAGDKVKRGMHIAAVGNTGRSTGPHLHYEVRVNGIGQNPRKFILEE
>Mature_304_residues
AKKSFTLMVIPDHDAPVKRYTIQRSFLTQVGMGLMLVVGLGVGASVHYFQVAADASENRILREENLTLRSQLKSVRERIE
HIGSTLDRVERFDQKLRAVTLLSDPQRNLAMGPTEPEAGTSAPATDTQFTQLTSTETPKALMGRLDRLSAEATRQEQSLQ
ELQAYFQDQKSLLASTPSIWPARGWVTSDFGSRLDPYTADRVMHGGMDIAAPHGKEVFAPSDGTVVFAGLEGGYGNVLVI
DHGYGIKTRYGHLSKMLVKAGDKVKRGMHIAAVGNTGRSTGPHLHYEVRVNGIGQNPRKFILEE

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=113, Percent_Identity=50.4424778761062, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI87082297, Length=143, Percent_Identity=34.2657342657343, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789099, Length=123, Percent_Identity=37.3983739837398, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI87082174, Length=128, Percent_Identity=33.59375, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 33516; Mature: 33384

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKSFTLMVIPDHDAPVKRYTIQRSFLTQVGMGLMLVVGLGVGASVHYFQVAADASENR
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
ILREENLTLRSQLKSVRERIEHIGSTLDRVERFDQKLRAVTLLSDPQRNLAMGPTEPEAG
EEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEECCCCCCCCCCCCCCCCC
TSAPATDTQFTQLTSTETPKALMGRLDRLSAEATRQEQSLQELQAYFQDQKSLLASTPSI
CCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WPARGWVTSDFGSRLDPYTADRVMHGGMDIAAPHGKEVFAPSDGTVVFAGLEGGYGNVLV
CCCCCCEECCCCCCCCCCHHHHHHHCCCEEECCCCCEEECCCCCCEEEEECCCCCCCEEE
IDHGYGIKTRYGHLSKMLVKAGDKVKRGMHIAAVGNTGRSTGPHLHYEVRVNGIGQNPRK
EECCCCCCCHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCHH
FILEE
HCCCC
>Mature Secondary Structure 
AKKSFTLMVIPDHDAPVKRYTIQRSFLTQVGMGLMLVVGLGVGASVHYFQVAADASENR
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
ILREENLTLRSQLKSVRERIEHIGSTLDRVERFDQKLRAVTLLSDPQRNLAMGPTEPEAG
EEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEECCCCCCCCCCCCCCCCC
TSAPATDTQFTQLTSTETPKALMGRLDRLSAEATRQEQSLQELQAYFQDQKSLLASTPSI
CCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WPARGWVTSDFGSRLDPYTADRVMHGGMDIAAPHGKEVFAPSDGTVVFAGLEGGYGNVLV
CCCCCCEECCCCCCCCCCHHHHHHHCCCEEECCCCCEEECCCCCCEEEEECCCCCCCEEE
IDHGYGIKTRYGHLSKMLVKAGDKVKRGMHIAAVGNTGRSTGPHLHYEVRVNGIGQNPRK
EECCCCCCCHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCHH
FILEE
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]