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The map label for this gene is ndoA [H]

Identifier: 108757451

GI number: 108757451

Start: 3462548

End: 3462889

Strand: Direct

Name: ndoA [H]

Synonym: MXAN_2954

Alternate gene names: 108757451

Gene position: 3462548-3462889 (Clockwise)

Preceding gene: 108762176

Following gene: 108763166

Centisome position: 37.88

GC content: 68.13

Gene sequence:

>342_bases
ATGAACGGACATCTGGACGGAGGATTCATTCCAGTGGCGACGCTGGACGTACTCGACGCGCGGGGCCGCGCGGTGGTGCA
GGTGGACGGTGTCGCGGTGGCCCTCTTCCGCGTGAATGGGGAGCTCCATGCGGTGGCGGACGCATGCCCCCACCGGGCCG
GGCCCCTGTCCGAGGGGGACCTGGTGGGATACGTGGTGCACTGTCCGTTGCACACCTGGCCGTTCGACATCCGGACGGGG
CAGTGCCCTCGGCATCCAGGGGTGCAGGTCCGCACCTATGTGGTGCGTGTGCAGGGACAGCACATCCTCGTGTCCGCATC
AGGTAGGGTCCACGCCCCCTGA

Upstream 100 bases:

>100_bases
CTAATGACGCGGCACGGCGGGTGTCAAGGGACGCTATCACGCTCTGTTTCGTCCGGGTGGGGATGTGTCGGCCCCGGCCG
GACGTTGGGGAACTTCAGGA

Downstream 100 bases:

>100_bases
GTGCCGGCCCCTTCCAGGAGCGATTCCACTGTGACTTCGTCCCGAGCCCGCCGCAAAGCCCCCGCCGCTGCCGCCCCCGC
CGCTGTCCCCGATACCTCGG

Product: Rieske family iron-sulfur cluster-binding protein

Products: nitrite; NADH; NADPH; H+

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MNGHLDGGFIPVATLDVLDARGRAVVQVDGVAVALFRVNGELHAVADACPHRAGPLSEGDLVGYVVHCPLHTWPFDIRTG
QCPRHPGVQVRTYVVRVQGQHILVSASGRVHAP

Sequences:

>Translated_113_residues
MNGHLDGGFIPVATLDVLDARGRAVVQVDGVAVALFRVNGELHAVADACPHRAGPLSEGDLVGYVVHCPLHTWPFDIRTG
QCPRHPGVQVRTYVVRVQGQHILVSASGRVHAP
>Mature_113_residues
MNGHLDGGFIPVATLDVLDARGRAVVQVDGVAVALFRVNGELHAVADACPHRAGPLSEGDLVGYVVHCPLHTWPFDIRTG
QCPRHPGVQVRTYVVRVQGQHILVSASGRVHAP

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. This subunit is a 2Fe-2S ferredoxin that transfers electrons

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.7.1.4

Molecular weight: Translated: 12056; Mature: 12056

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGHLDGGFIPVATLDVLDARGRAVVQVDGVAVALFRVNGELHAVADACPHRAGPLSEGD
CCCCCCCCEEEEEEEEEECCCCCEEEEECCEEEEEEEECCCEEEEECCCCCCCCCCCCCC
LVGYVVHCPLHTWPFDIRTGQCPRHPGVQVRTYVVRVQGQHILVSASGRVHAP
EEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCEEECC
>Mature Secondary Structure
MNGHLDGGFIPVATLDVLDARGRAVVQVDGVAVALFRVNGELHAVADACPHRAGPLSEGD
CCCCCCCCEEEEEEEEEECCCCCEEEEECCEEEEEEEECCCEEEEECCCCCCCCCCCCCC
LVGYVVHCPLHTWPFDIRTGQCPRHPGVQVRTYVVRVQGQHILVSASGRVHAP
EEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ammonium hydroxide; NAD+; NADP+; H2O

Specific reaction: ammonium hydroxide + 3 NAD(P)+ + H2O = nitrite + 3 NAD(P)H + 3 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA