| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762091
Identifier: 108762091
GI number: 108762091
Start: 1297027
End: 1297875
Strand: Reverse
Name: 108762091
Synonym: MXAN_1114
Alternate gene names: NA
Gene position: 1297875-1297027 (Counterclockwise)
Preceding gene: 108759373
Following gene: 108759197
Centisome position: 14.2
GC content: 71.61
Gene sequence:
>849_bases ATGTCCGCTCCTCGGCCTTCGGGATGTCCGCCCGCGAGCACGGCCGCGGTCCCCCCGCCCCGCCCTTGCGCCTCCCACAT ACGCTGGACGGGGCGGCCCCAGCGTCCCCGCCTTGGAGGCACCATGTGGAATCCTGTCGCGAATGCGCGGGCGGCATGGC GGATGGCACGGGCCCTCCGCGACCCGGAGAAACTCCAGGACGTCCTGGGTCTGGCCCCCGTGCTCGCGCCCCCCGTGGCG ATGCGGCGGCTGGTGGAGCGGCTGATGAGCCACGCCTCCGCGGCCCAGGCCTTCATCGAGCGCCCGCGCGTGGGCCTGCT CCACCTGGCCGCGCTGCGCGCCCTGCCCGAACACACCCTGGGACGTGCCTTCGTCGACCACCTGGAGGCGAACCAGGTGA ACCCTGACGCACTGCCCTACCTGGAGGCGCGGACCGACGAGGAGTACGTGCGAGCGCACCTGCTCGAATCCCATGACGTC TGGCACGTCCTCACCGGCTTTCCGACGAGCGTGGCGGGCGAGCTGGGCATCCAGGCCTTCAGCCTGGCCCAGGTGGGCAG CCCCTTCGCCCTGGGCATCCTCGCGGGCGGCCTGACGAACACCCTCCTCTACGCGTTCTCTCAGCGCGAGGAGCGCATGC GCGCCATCGTCCGGGGCTGGCTGCTGGGACAACGGGCCCGACCGCTCTTCGGGGCACCGTGGTGTCAAATGTGGGAGTCG CCCCTGGCGGAGGTCCGCCAGCGCTACGGCCTGGACCTGGCGGCGGTGGATGCAGTGCTTGACGACCCCATGCGTCCGGC CATGGAAGTCAGGAATCCAGGCAGCGCGTCCCCGCCCCAATCATGCTAG
Upstream 100 bases:
>100_bases GCGCGGCGCGCATGGCGGCCCTCCTATGGCTTCAACCTCCGTCCCCTCCACCCGGCGCGCACGGACCTGGAAGCGGCCCG GCCGGCTGCCCGCCCCCCGA
Downstream 100 bases:
>100_bases ACGCGCCCCATGGACCAGACTCCCGAGAAGGACCCCCTCCGCGCACGTCTCGAGAAGATGGAGAAGCAAGCCGAGCTGGG TGGCGGTGCCGACCGCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSAPRPSGCPPASTAAVPPPRPCASHIRWTGRPQRPRLGGTMWNPVANARAAWRMARALRDPEKLQDVLGLAPVLAPPVA MRRLVERLMSHASAAQAFIERPRVGLLHLAALRALPEHTLGRAFVDHLEANQVNPDALPYLEARTDEEYVRAHLLESHDV WHVLTGFPTSVAGELGIQAFSLAQVGSPFALGILAGGLTNTLLYAFSQREERMRAIVRGWLLGQRARPLFGAPWCQMWES PLAEVRQRYGLDLAAVDAVLDDPMRPAMEVRNPGSASPPQSC
Sequences:
>Translated_282_residues MSAPRPSGCPPASTAAVPPPRPCASHIRWTGRPQRPRLGGTMWNPVANARAAWRMARALRDPEKLQDVLGLAPVLAPPVA MRRLVERLMSHASAAQAFIERPRVGLLHLAALRALPEHTLGRAFVDHLEANQVNPDALPYLEARTDEEYVRAHLLESHDV WHVLTGFPTSVAGELGIQAFSLAQVGSPFALGILAGGLTNTLLYAFSQREERMRAIVRGWLLGQRARPLFGAPWCQMWES PLAEVRQRYGLDLAAVDAVLDDPMRPAMEVRNPGSASPPQSC >Mature_281_residues SAPRPSGCPPASTAAVPPPRPCASHIRWTGRPQRPRLGGTMWNPVANARAAWRMARALRDPEKLQDVLGLAPVLAPPVAM RRLVERLMSHASAAQAFIERPRVGLLHLAALRALPEHTLGRAFVDHLEANQVNPDALPYLEARTDEEYVRAHLLESHDVW HVLTGFPTSVAGELGIQAFSLAQVGSPFALGILAGGLTNTLLYAFSQREERMRAIVRGWLLGQRARPLFGAPWCQMWESP LAEVRQRYGLDLAAVDAVLDDPMRPAMEVRNPGSASPPQSC
Specific function: Unknown
COG id: COG5031
COG function: function code H; Uncharacterized protein involved in ubiquinone biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI166795285, Length=205, Percent_Identity=29.7560975609756, Blast_Score=71, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6320410, Length=198, Percent_Identity=26.7676767676768, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI221544598, Length=181, Percent_Identity=24.8618784530387, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24665922, Length=181, Percent_Identity=24.8618784530387, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30862; Mature: 30731
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPRPSGCPPASTAAVPPPRPCASHIRWTGRPQRPRLGGTMWNPVANARAAWRMARALR CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHC DPEKLQDVLGLAPVLAPPVAMRRLVERLMSHASAAQAFIERPRVGLLHLAALRALPEHTL CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GRAFVDHLEANQVNPDALPYLEARTDEEYVRAHLLESHDVWHVLTGFPTSVAGELGIQAF HHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH SLAQVGSPFALGILAGGLTNTLLYAFSQREERMRAIVRGWLLGQRARPLFGAPWCQMWES HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH PLAEVRQRYGLDLAAVDAVLDDPMRPAMEVRNPGSASPPQSC HHHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SAPRPSGCPPASTAAVPPPRPCASHIRWTGRPQRPRLGGTMWNPVANARAAWRMARALR CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHC DPEKLQDVLGLAPVLAPPVAMRRLVERLMSHASAAQAFIERPRVGLLHLAALRALPEHTL CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GRAFVDHLEANQVNPDALPYLEARTDEEYVRAHLLESHDVWHVLTGFPTSVAGELGIQAF HHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH SLAQVGSPFALGILAGGLTNTLLYAFSQREERMRAIVRGWLLGQRARPLFGAPWCQMWES HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH PLAEVRQRYGLDLAAVDAVLDDPMRPAMEVRNPGSASPPQSC HHHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA