| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ptpA [H]
Identifier: 108762069
GI number: 108762069
Start: 1989816
End: 1992095
Strand: Reverse
Name: ptpA [H]
Synonym: MXAN_1682
Alternate gene names: 108762069
Gene position: 1992095-1989816 (Counterclockwise)
Preceding gene: 108762139
Following gene: 108758424
Centisome position: 21.8
GC content: 69.43
Gene sequence:
>2280_bases TTGGTCGTGAAGGATGCCGCTTCCTACCATCGGCGCATGCGATTCCCCTTCGTTCCCCTCGGCCTGATGCTCACGGCGCT GACGGGAGCCCCCGGCCTGGCGCTGGATGACGCTCCCCCCCCCCTCGCCCCCTCCGGAACCACGCCGGATGCGCAGGTCC AGGCGAAGCTGGACCTGGCGGACCGGTTCGTCCGCCGGGCGGAACTCCTGCGGGACAGCCTGGTTCCCCCCAGGTGGCTG CGTGAGGGCGACCGGTTGGTCTTCTGGTCCCGTGAGGGCAAGGACGGCGGGACGTGGGTGCTGGCGCACGCGAAGACCGG GGAGCTGAAGCCACTCCTTTCCGGTGAGCAACTGAGGCAGCAGCTCTCGACGCTGCTGGGCAAGCCCATCACCGCGCCCC GCTTCTTCGACGTCGCGCTCGCTCCGGATGAGCGGGGCATCGTGTTCCGCCTGGAGGGGAAGACCTTTGGCCTGGGCCTG TCAGGTGGCCATGTCACCTTGCTGTCGCCGGAGGACCGGGCCGCGCTGACGCTGTCGCCCCAGCACTTCCTCGCGCCGAA AGGCGGCGCGCTCGCCGTGCAACGCCAGGGCGGCTTCGCGGTGCTGAACGCGGAAGGCGCCACCGTGGTCGAGCGCACGG GGGAAGCGAACCTCGACTGGCGGATTCCGGAGCGTCCCTGGTCACCGGATGGCCGCTTCCTGGTGGTGTGGCGGGACGAC CTCCGCGCCGTTCACCAGGTGCCCGTCGTGGACTACTCCTCCGCGCTGGAGAAGGTGACGACGGTGCCGTACACGAAGTC CGGGACGCCACTGCCGCGCGCGGAGCTCCATGTCGTGGAAGTGGCGACGGGCCGCGTGACGCGCGTTCCGCCCGTCGAGG GCGAGACATATGACTGGTTCGCCGGCTGGAATCCCGAGGGCACCGAGGCGCTGTGTCTCCACCTCTCGCGTGACGCCAAG CGGCTGGACCTGAGCGTCGTGGAACCCGCGTCGGGCCAGCGTCGGCACGTCCTGCGCGAGGAGCGCCCGGAGACCTTCGT CACCGGCCTGGACTTCGCGGTGGGCGGCTGGGCGAAGCAGGTGACGGCGCTGCCAGGAGGGCGCGGCTACCTCTGGATGT CCGAGCGTGATGGCTGGCGCCACGTGTATGCGTATGACCGCTCGGGGAAGCGCGTGAGGCAGCTCACGCGAGGCGCCTTT CCCGTGCACGAAGTGGTGGGAGTCGCCCCCACGGGAGATGCCCTCTACGTGCTGGCCTCCGCCGACAGCGGCGCGCCATA CGAGCACCTCTTCTACCGGGGAAGCCTGAAGGGAGGCGCGTTGAAGCGGCTGTCCTCTGCCTCGGGGATGCACCGCATCA CGCCGTCCCCCTCCGGCCAGTACTACGTGGACACATGGTCCTCGCGGACACAGCCCCGGTTGAGGGAGCTGGTGTCCGTG GAGGGTGGCAAGCGCGTGCGGCTCACCACGTCGGACGCGAGTGAGTTCGAGTCGCTCGGCGACACGCGGCCGGAGGCGCT GCTCGTCAAGGCGGCCGATGGCGTCACGCCCCTGCACGGCGTGCTCTACAAGCCACGCGACTTCGACGCCTCGAAGCGCT ACCCCGTGCTCGCCTCCATCTACGCGGGTCCGTTCACCACCGTTGTCCCCTGGAGCTTCCTGGGGACTTCGGATTCGCTG ACCGCCAGCGGCCTGGCGCAACTGGGCTTCATCGTGGTGTTGCTGGACCCCCGGGGTGGCCCCGGACGGAGCAAGTCCTT CCAGGACGCGAACTACGGCCGCGTGGGCCAGACGGAGATTCCCGACTACGTCGCGGGGCTGAAGCAGGCCGCGTCCACGC GCCCCTGGATGGACCTGGAGCGGGTCGGCATCCACGGCGGTTCGTGGGGCGGCTATTTCACGCTGCGCGGCATGCTGACG GCGCCGGACTTCTTCAAGGCGGGCTACGCCGGAGCCCCCGGAGCGCTGGAGGAAGAGGCCATCATCAACGAGCCCTATCT CAACCTCCCAAGCGTCAATCCCCAGGGGTACGCGGCGGGCGACAACCTCGCGATTGCAGACAGGCTGAGGGGCCACCTGA AGCTGATGCACGGCACGAGCGACGTGAATGCCACGCTCTCCGTGACGATGCGGATGGCGGACGCGCTCATCCGCGCGGGC AAGCGCTTCGAATTGCTCATCATGCCCGGCCAGCCGCACTCCCCTCGGGGTGCCGCCAGCCGCTACTACCGGGACGATGT GGGCCTGTTCTTCCTCCGGACCCTGGGCGGTCCACGGTAA
Upstream 100 bases:
>100_bases GCGTCCGAAGTGCAACTCCTCCGCCACGGCGACGAAGAGCTGGAGCTGACGGAATTCCATATCGAGACGATATCCATCTC AATGCGCATCAAAAGATATA
Downstream 100 bases:
>100_bases GGGCTCCTCATGGATCCTTGCGGCCAGGCGCTCGGCGGTCCGCATGGAGCCAGCGGCGCACCTCCTCCAGGTACTCCCGA GGGAGGACATGCCCGCTGTC
Product: S9B family peptidase
Products: NA
Alternate protein names: PTP; Prolyl tripeptidyl peptidase A [H]
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MVVKDAASYHRRMRFPFVPLGLMLTALTGAPGLALDDAPPPLAPSGTTPDAQVQAKLDLADRFVRRAELLRDSLVPPRWL REGDRLVFWSREGKDGGTWVLAHAKTGELKPLLSGEQLRQQLSTLLGKPITAPRFFDVALAPDERGIVFRLEGKTFGLGL SGGHVTLLSPEDRAALTLSPQHFLAPKGGALAVQRQGGFAVLNAEGATVVERTGEANLDWRIPERPWSPDGRFLVVWRDD LRAVHQVPVVDYSSALEKVTTVPYTKSGTPLPRAELHVVEVATGRVTRVPPVEGETYDWFAGWNPEGTEALCLHLSRDAK RLDLSVVEPASGQRRHVLREERPETFVTGLDFAVGGWAKQVTALPGGRGYLWMSERDGWRHVYAYDRSGKRVRQLTRGAF PVHEVVGVAPTGDALYVLASADSGAPYEHLFYRGSLKGGALKRLSSASGMHRITPSPSGQYYVDTWSSRTQPRLRELVSV EGGKRVRLTTSDASEFESLGDTRPEALLVKAADGVTPLHGVLYKPRDFDASKRYPVLASIYAGPFTTVVPWSFLGTSDSL TASGLAQLGFIVVLLDPRGGPGRSKSFQDANYGRVGQTEIPDYVAGLKQAASTRPWMDLERVGIHGGSWGGYFTLRGMLT APDFFKAGYAGAPGALEEEAIINEPYLNLPSVNPQGYAAGDNLAIADRLRGHLKLMHGTSDVNATLSVTMRMADALIRAG KRFELLIMPGQPHSPRGAASRYYRDDVGLFFLRTLGGPR
Sequences:
>Translated_759_residues MVVKDAASYHRRMRFPFVPLGLMLTALTGAPGLALDDAPPPLAPSGTTPDAQVQAKLDLADRFVRRAELLRDSLVPPRWL REGDRLVFWSREGKDGGTWVLAHAKTGELKPLLSGEQLRQQLSTLLGKPITAPRFFDVALAPDERGIVFRLEGKTFGLGL SGGHVTLLSPEDRAALTLSPQHFLAPKGGALAVQRQGGFAVLNAEGATVVERTGEANLDWRIPERPWSPDGRFLVVWRDD LRAVHQVPVVDYSSALEKVTTVPYTKSGTPLPRAELHVVEVATGRVTRVPPVEGETYDWFAGWNPEGTEALCLHLSRDAK RLDLSVVEPASGQRRHVLREERPETFVTGLDFAVGGWAKQVTALPGGRGYLWMSERDGWRHVYAYDRSGKRVRQLTRGAF PVHEVVGVAPTGDALYVLASADSGAPYEHLFYRGSLKGGALKRLSSASGMHRITPSPSGQYYVDTWSSRTQPRLRELVSV EGGKRVRLTTSDASEFESLGDTRPEALLVKAADGVTPLHGVLYKPRDFDASKRYPVLASIYAGPFTTVVPWSFLGTSDSL TASGLAQLGFIVVLLDPRGGPGRSKSFQDANYGRVGQTEIPDYVAGLKQAASTRPWMDLERVGIHGGSWGGYFTLRGMLT APDFFKAGYAGAPGALEEEAIINEPYLNLPSVNPQGYAAGDNLAIADRLRGHLKLMHGTSDVNATLSVTMRMADALIRAG KRFELLIMPGQPHSPRGAASRYYRDDVGLFFLRTLGGPR >Mature_759_residues MVVKDAASYHRRMRFPFVPLGLMLTALTGAPGLALDDAPPPLAPSGTTPDAQVQAKLDLADRFVRRAELLRDSLVPPRWL REGDRLVFWSREGKDGGTWVLAHAKTGELKPLLSGEQLRQQLSTLLGKPITAPRFFDVALAPDERGIVFRLEGKTFGLGL SGGHVTLLSPEDRAALTLSPQHFLAPKGGALAVQRQGGFAVLNAEGATVVERTGEANLDWRIPERPWSPDGRFLVVWRDD LRAVHQVPVVDYSSALEKVTTVPYTKSGTPLPRAELHVVEVATGRVTRVPPVEGETYDWFAGWNPEGTEALCLHLSRDAK RLDLSVVEPASGQRRHVLREERPETFVTGLDFAVGGWAKQVTALPGGRGYLWMSERDGWRHVYAYDRSGKRVRQLTRGAF PVHEVVGVAPTGDALYVLASADSGAPYEHLFYRGSLKGGALKRLSSASGMHRITPSPSGQYYVDTWSSRTQPRLRELVSV EGGKRVRLTTSDASEFESLGDTRPEALLVKAADGVTPLHGVLYKPRDFDASKRYPVLASIYAGPFTTVVPWSFLGTSDSL TASGLAQLGFIVVLLDPRGGPGRSKSFQDANYGRVGQTEIPDYVAGLKQAASTRPWMDLERVGIHGGSWGGYFTLRGMLT APDFFKAGYAGAPGALEEEAIINEPYLNLPSVNPQGYAAGDNLAIADRLRGHLKLMHGTSDVNATLSVTMRMADALIRAG KRFELLIMPGQPHSPRGAASRYYRDDVGLFFLRTLGGPR
Specific function: Serine proteinase. Releases tripeptides from the free amino terminus of proteins. Has a requirement for Pro in the P1 position, but is inactivated by Pro in the P1' position [H]
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI37577089, Length=617, Percent_Identity=27.5526742301459, Blast_Score=172, Evalue=2e-42, Organism=Homo sapiens, GI18450280, Length=617, Percent_Identity=27.5526742301459, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI194394146, Length=351, Percent_Identity=30.7692307692308, Blast_Score=148, Evalue=2e-35, Organism=Homo sapiens, GI18765694, Length=540, Percent_Identity=24.8148148148148, Blast_Score=106, Evalue=1e-22, Organism=Homo sapiens, GI37577091, Length=616, Percent_Identity=24.1883116883117, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI16933540, Length=552, Percent_Identity=22.6449275362319, Blast_Score=103, Evalue=6e-22, Organism=Homo sapiens, GI85787627, Length=564, Percent_Identity=22.8723404255319, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI295842403, Length=564, Percent_Identity=22.8723404255319, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI295842359, Length=564, Percent_Identity=22.8723404255319, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI52426756, Length=565, Percent_Identity=23.1858407079646, Blast_Score=86, Evalue=2e-16, Organism=Homo sapiens, GI295849272, Length=564, Percent_Identity=22.8723404255319, Blast_Score=85, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17508017, Length=256, Percent_Identity=28.515625, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17508019, Length=256, Percent_Identity=28.515625, Blast_Score=114, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17564634, Length=219, Percent_Identity=26.9406392694064, Blast_Score=72, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17564632, Length=219, Percent_Identity=26.9406392694064, Blast_Score=72, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17550672, Length=580, Percent_Identity=22.0689655172414, Blast_Score=71, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324793, Length=559, Percent_Identity=25.0447227191413, Blast_Score=94, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6321817, Length=567, Percent_Identity=22.5749559082892, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI45550825, Length=243, Percent_Identity=33.3333333333333, Blast_Score=139, Evalue=6e-33, Organism=Drosophila melanogaster, GI45553511, Length=243, Percent_Identity=33.3333333333333, Blast_Score=139, Evalue=6e-33, Organism=Drosophila melanogaster, GI45551969, Length=243, Percent_Identity=33.3333333333333, Blast_Score=139, Evalue=6e-33, Organism=Drosophila melanogaster, GI24582032, Length=502, Percent_Identity=24.5019920318725, Blast_Score=86, Evalue=9e-17, Organism=Drosophila melanogaster, GI24582257, Length=229, Percent_Identity=27.9475982532751, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI17933704, Length=647, Percent_Identity=23.338485316847, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI221331178, Length=242, Percent_Identity=28.5123966942149, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI161083744, Length=647, Percent_Identity=23.338485316847, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001375 - InterPro: IPR002469 [H]
Pfam domain/function: PF00930 DPPIV_N; PF00326 Peptidase_S9 [H]
EC number: =3.4.14.12 [H]
Molecular weight: Translated: 82734; Mature: 82734
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVKDAASYHRRMRFPFVPLGLMLTALTGAPGLALDDAPPPLAPSGTTPDAQVQAKLDLA CCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHH DRFVRRAELLRDSLVPPRWLREGDRLVFWSREGKDGGTWVLAHAKTGELKPLLSGEQLRQ HHHHHHHHHHHHHCCCCHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHH QLSTLLGKPITAPRFFDVALAPDERGIVFRLEGKTFGLGLSGGHVTLLSPEDRAALTLSP HHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEECCCCEEEEECCCCCEEEEECC QHFLAPKGGALAVQRQGGFAVLNAEGATVVERTGEANLDWRIPERPWSPDGRFLVVWRDD HHHCCCCCCEEEEEECCCEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCCEEEEECHH LRAVHQVPVVDYSSALEKVTTVPYTKSGTPLPRAELHVVEVATGRVTRVPPVEGETYDWF HHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCCEEEE AGWNPEGTEALCLHLSRDAKRLDLSVVEPASGQRRHVLREERPETFVTGLDFAVGGWAKQ CCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEECCCHHHCCHHHH VTALPGGRGYLWMSERDGWRHVYAYDRSGKRVRQLTRGAFPVHEVVGVAPTGDALYVLAS EEECCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCHHHHEECCCCCCEEEEEEE ADSGAPYEHLFYRGSLKGGALKRLSSASGMHRITPSPSGQYYVDTWSSRTQPRLRELVSV CCCCCCHHHEEEECCCCCHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCCHHHHHHHHC EGGKRVRLTTSDASEFESLGDTRPEALLVKAADGVTPLHGVLYKPRDFDASKRYPVLASI CCCCEEEEECCCHHHHHHHCCCCCCEEEEEECCCCCCHHHEEECCCCCCCCCCCCEEEEE YAGPFTTVVPWSFLGTSDSLTASGLAQLGFIVVLLDPRGGPGRSKSFQDANYGRVGQTEI CCCCCCCCCCEEECCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC PDYVAGLKQAASTRPWMDLERVGIHGGSWGGYFTLRGMLTAPDFFKAGYAGAPGALEEEA CHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCH IINEPYLNLPSVNPQGYAAGDNLAIADRLRGHLKLMHGTSDVNATLSVTMRMADALIRAG HCCCCCCCCCCCCCCCEECCCCEEHHHHHCCEEEEEECCCCCCEEEEHHHHHHHHHHHCC KRFELLIMPGQPHSPRGAASRYYRDDVGLFFLRTLGGPR CCEEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHCCCCC >Mature Secondary Structure MVVKDAASYHRRMRFPFVPLGLMLTALTGAPGLALDDAPPPLAPSGTTPDAQVQAKLDLA CCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHH DRFVRRAELLRDSLVPPRWLREGDRLVFWSREGKDGGTWVLAHAKTGELKPLLSGEQLRQ HHHHHHHHHHHHHCCCCHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHH QLSTLLGKPITAPRFFDVALAPDERGIVFRLEGKTFGLGLSGGHVTLLSPEDRAALTLSP HHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEECCCCEEEEECCCCCEEEEECC QHFLAPKGGALAVQRQGGFAVLNAEGATVVERTGEANLDWRIPERPWSPDGRFLVVWRDD HHHCCCCCCEEEEEECCCEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCCEEEEECHH LRAVHQVPVVDYSSALEKVTTVPYTKSGTPLPRAELHVVEVATGRVTRVPPVEGETYDWF HHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCCEEEE AGWNPEGTEALCLHLSRDAKRLDLSVVEPASGQRRHVLREERPETFVTGLDFAVGGWAKQ CCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEECCCHHHCCHHHH VTALPGGRGYLWMSERDGWRHVYAYDRSGKRVRQLTRGAFPVHEVVGVAPTGDALYVLAS EEECCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCHHHHEECCCCCCEEEEEEE ADSGAPYEHLFYRGSLKGGALKRLSSASGMHRITPSPSGQYYVDTWSSRTQPRLRELVSV CCCCCCHHHEEEECCCCCHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCCHHHHHHHHC EGGKRVRLTTSDASEFESLGDTRPEALLVKAADGVTPLHGVLYKPRDFDASKRYPVLASI CCCCEEEEECCCHHHHHHHCCCCCCEEEEEECCCCCCHHHEEECCCCCCCCCCCCEEEEE YAGPFTTVVPWSFLGTSDSLTASGLAQLGFIVVLLDPRGGPGRSKSFQDANYGRVGQTEI CCCCCCCCCCEEECCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC PDYVAGLKQAASTRPWMDLERVGIHGGSWGGYFTLRGMLTAPDFFKAGYAGAPGALEEEA CHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCH IINEPYLNLPSVNPQGYAAGDNLAIADRLRGHLKLMHGTSDVNATLSVTMRMADALIRAG HCCCCCCCCCCCCCCCEECCCCEEHHHHHCCEEEEEECCCCCCEEEEHHHHHHHHHHHCC KRFELLIMPGQPHSPRGAASRYYRDDVGLFFLRTLGGPR CCEEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA