Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is tldD [C]

Identifier: 108762043

GI number: 108762043

Start: 1917230

End: 1918633

Strand: Direct

Name: tldD [C]

Synonym: MXAN_1615

Alternate gene names: 108762043

Gene position: 1917230-1918633 (Clockwise)

Preceding gene: 108762719

Following gene: 108756847

Centisome position: 20.98

GC content: 71.51

Gene sequence:

>1404_bases
GTGTGTCGGCGGAGGCAGTGGATGCGGGGCGGTTCCGGTTCCGAGGAGGACAGCGGGGTGGCGGCATACGCGGGCCTTCA
GCCTCGCGAATGGCTGACGTCCGCTGGCGAAGCGCTGGAGGGCTTCACGCGGCACCACGCACCCTCGCAGGCCGAGCTGT
TCCTCGCCGCGGAGCGCAGGCTGTCGTTCGAATACGACGCCGGGACGGGGCGCTCCATCGTCAACCAGGGGGAGACCATG
GATGCCATGGCGCGCGTGAGCTGGGACGCGCGGCAGGGCATGTTGACCGCGCCGGTGGGTGAGACAGGCGCGCTGCCGCT
GCTCCTGGAGCGCACCGCGCGACAGGCCACTTCAGGACGTGCGAGTCCGCTGCCAGAGCTTCCAGCTCAGAGCGATTCCC
CGAGTGTCTCGAGTCCTCCTCCGCTCCAGCCGGAGCGCGCGGCGCGCCGGATGAAACACTTCATCGAGACCGCCGTGCCC
CCTGGCAGCGTCGTGCAGGCCGCGCTGCTCACCCAGGTGTCCACGTGGCGCGCCCTGGTGCGCGCAAGTGGCGCGCGCCG
TGCTCGCACGGAATGGCGCGAGGAACTGTTCGTGCGCTGTGAGACGCCGCGAGGCGCCGTGGTGGATGCGGTGGCGTTTC
CCGAAACAGCGGCGGACGACACGGTCATCATTCCGCTGCGCCATCGACTCGCGGAGGCTGTAGCTGCCCTCACGGGCCCC
GCGGAGTCGCTGGACCGCGACCTCCCCCTGGTGCTGCGGCCGGCGGTGGCCGCGCCTCTCGCGGCGGGGCTCATCTGGTT
GCTACGGGGCGACGTGGCCGCGGCCACACCCGCCCTGGCCCGGGCCGTGGGGCGCAAGTTGTTCCCCTCGGTCCTGAGCG
TGGTGGACGACCCGAACCACCCCACGGGCACGCGGCGCGTATCCATGGATGATGAAGGACTCTCCACAGACACGCTGTCG
CTGGTCGACGCGGGCGTGCTGCGAGGCTTCCTTCACGCCTCCGACACCGCATCGCGGCTCGGCGCGCCGCTCAACGGGCG
TGGCTTCCGCACCAGCATGTCACCACCCACGCCCGAAGCCGTGAATCCCTTCCTCGTGCCCGGTGAGACCGCCGTGCTCC
CCGCGCACTACACGGAACTCGTCGCGCGCGTGGAGACCTTCACCACCATGCCGCGTCCCGGCACCGTCACGTTGGTGGCG
GGCGGCTGGGAGGTACGCGACGGCCGTCGTGTGCGCCGCATCGCTCCGGTGGAACTGGAGCTCCCCGTGCTGGAGACCTT
CCGCGCGCTGCGCGGCGTGGGGACGGACCTGACCTTTTTCCCCACCGCCGAGGGCTGTGGCACGCCGACGCTCGTCTTCC
CGCCCCTGCTGTCGGGTGCCCAGGGAGGGCAGGCGGCCAGGTGA

Upstream 100 bases:

>100_bases
GCACGGACGGACGGTTGAACCACCGATACGGAATCCGCGCGACAACGCGGAGCGTCCCCACGCGAGGACGGAGACCGGTA
TCCTCACGAGCAGTCCCAGC

Downstream 100 bases:

>100_bases
AGTCCACGTCCCTTGGGGCGGCGCGGGGCCAGCCAGGCGACGCGGGCCCGCCTGCCCTGCGAGCAGGACGCGCGCTGTCT
TCGAATCCGGTGCATGCTGC

Product: TldD/PmbA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MCRRRQWMRGGSGSEEDSGVAAYAGLQPREWLTSAGEALEGFTRHHAPSQAELFLAAERRLSFEYDAGTGRSIVNQGETM
DAMARVSWDARQGMLTAPVGETGALPLLLERTARQATSGRASPLPELPAQSDSPSVSSPPPLQPERAARRMKHFIETAVP
PGSVVQAALLTQVSTWRALVRASGARRARTEWREELFVRCETPRGAVVDAVAFPETAADDTVIIPLRHRLAEAVAALTGP
AESLDRDLPLVLRPAVAAPLAAGLIWLLRGDVAAATPALARAVGRKLFPSVLSVVDDPNHPTGTRRVSMDDEGLSTDTLS
LVDAGVLRGFLHASDTASRLGAPLNGRGFRTSMSPPTPEAVNPFLVPGETAVLPAHYTELVARVETFTTMPRPGTVTLVA
GGWEVRDGRRVRRIAPVELELPVLETFRALRGVGTDLTFFPTAEGCGTPTLVFPPLLSGAQGGQAAR

Sequences:

>Translated_467_residues
MCRRRQWMRGGSGSEEDSGVAAYAGLQPREWLTSAGEALEGFTRHHAPSQAELFLAAERRLSFEYDAGTGRSIVNQGETM
DAMARVSWDARQGMLTAPVGETGALPLLLERTARQATSGRASPLPELPAQSDSPSVSSPPPLQPERAARRMKHFIETAVP
PGSVVQAALLTQVSTWRALVRASGARRARTEWREELFVRCETPRGAVVDAVAFPETAADDTVIIPLRHRLAEAVAALTGP
AESLDRDLPLVLRPAVAAPLAAGLIWLLRGDVAAATPALARAVGRKLFPSVLSVVDDPNHPTGTRRVSMDDEGLSTDTLS
LVDAGVLRGFLHASDTASRLGAPLNGRGFRTSMSPPTPEAVNPFLVPGETAVLPAHYTELVARVETFTTMPRPGTVTLVA
GGWEVRDGRRVRRIAPVELELPVLETFRALRGVGTDLTFFPTAEGCGTPTLVFPPLLSGAQGGQAAR
>Mature_467_residues
MCRRRQWMRGGSGSEEDSGVAAYAGLQPREWLTSAGEALEGFTRHHAPSQAELFLAAERRLSFEYDAGTGRSIVNQGETM
DAMARVSWDARQGMLTAPVGETGALPLLLERTARQATSGRASPLPELPAQSDSPSVSSPPPLQPERAARRMKHFIETAVP
PGSVVQAALLTQVSTWRALVRASGARRARTEWREELFVRCETPRGAVVDAVAFPETAADDTVIIPLRHRLAEAVAALTGP
AESLDRDLPLVLRPAVAAPLAAGLIWLLRGDVAAATPALARAVGRKLFPSVLSVVDDPNHPTGTRRVSMDDEGLSTDTLS
LVDAGVLRGFLHASDTASRLGAPLNGRGFRTSMSPPTPEAVNPFLVPGETAVLPAHYTELVARVETFTTMPRPGTVTLVA
GGWEVRDGRRVRRIAPVELELPVLETFRALRGVGTDLTFFPTAEGCGTPTLVFPPLLSGAQGGQAAR

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49819; Mature: 49819

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRRRQWMRGGSGSEEDSGVAAYAGLQPREWLTSAGEALEGFTRHHAPSQAELFLAAERR
CCCCHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHC
LSFEYDAGTGRSIVNQGETMDAMARVSWDARQGMLTAPVGETGALPLLLERTARQATSGR
CEEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHCCC
ASPLPELPAQSDSPSVSSPPPLQPERAARRMKHFIETAVPPGSVVQAALLTQVSTWRALV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RASGARRARTEWREELFVRCETPRGAVVDAVAFPETAADDTVIIPLRHRLAEAVAALTGP
HHCCCHHHHHHHHHHHEEEECCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCC
AESLDRDLPLVLRPAVAAPLAAGLIWLLRGDVAAATPALARAVGRKLFPSVLSVVDDPNH
HHHHCCCCCEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PTGTRRVSMDDEGLSTDTLSLVDAGVLRGFLHASDTASRLGAPLNGRGFRTSMSPPTPEA
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHH
VNPFLVPGETAVLPAHYTELVARVETFTTMPRPGTVTLVAGGWEVRDGRRVRRIAPVELE
CCCEECCCCCEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCEECCCEEE
LPVLETFRALRGVGTDLTFFPTAEGCGTPTLVFPPLLSGAQGGQAAR
CHHHHHHHHHHCCCCCEEEEECCCCCCCCCEECCHHHCCCCCCCCCC
>Mature Secondary Structure
MCRRRQWMRGGSGSEEDSGVAAYAGLQPREWLTSAGEALEGFTRHHAPSQAELFLAAERR
CCCCHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHC
LSFEYDAGTGRSIVNQGETMDAMARVSWDARQGMLTAPVGETGALPLLLERTARQATSGR
CEEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHCCC
ASPLPELPAQSDSPSVSSPPPLQPERAARRMKHFIETAVPPGSVVQAALLTQVSTWRALV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RASGARRARTEWREELFVRCETPRGAVVDAVAFPETAADDTVIIPLRHRLAEAVAALTGP
HHCCCHHHHHHHHHHHEEEECCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCC
AESLDRDLPLVLRPAVAAPLAAGLIWLLRGDVAAATPALARAVGRKLFPSVLSVVDDPNH
HHHHCCCCCEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PTGTRRVSMDDEGLSTDTLSLVDAGVLRGFLHASDTASRLGAPLNGRGFRTSMSPPTPEA
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHH
VNPFLVPGETAVLPAHYTELVARVETFTTMPRPGTVTLVAGGWEVRDGRRVRRIAPVELE
CCCEECCCCCEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCEECCCEEE
LPVLETFRALRGVGTDLTFFPTAEGCGTPTLVFPPLLSGAQGGQAAR
CHHHHHHHHHHCCCCCEEEEECCCCCCCCCEECCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA