| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761947
Identifier: 108761947
GI number: 108761947
Start: 2936328
End: 2937908
Strand: Reverse
Name: 108761947
Synonym: MXAN_2523
Alternate gene names: NA
Gene position: 2937908-2936328 (Counterclockwise)
Preceding gene: 108764034
Following gene: 108757909
Centisome position: 32.14
GC content: 74.13
Gene sequence:
>1581_bases ATGGGCACCGAAGGGCGCAAGGACTGGCAGCGGCGCGAAAGCCTCACCAGCGCGCTGGTTCAGGTGGGCGTGGTGGCGGT GCTGCTCGCGGGCGCGGTGGTTTTCTTCGTCCACCGAGGCACCGTCCGCAAGCAGACGGAGGAACACCTGCGCGCGGCCC GCACGGCCGCCATGCGTGGCAACCCCGCTGACCTCGCCCGCGCGATGACGGAGCTGGACGCCCTGTTCCAGCTCGACGCC GAGGCCCGTGACGCCCAGGCCCTGGCTGCCGACATCCAGACGGTGCTGTGGCTGGAGCACCGGCAGCCCGGCGCGGACGC CAAGGCCCGCGAGCACCTCTCCCGCGCCGCGCAGTTGGAGTCGCAGTCCGGCGAGCGCTACGGCGCCCACGCACTGCATC TGCTGGCCGCGGGCAAGTCCGCCGAGGCGGAGCAGTACCTGGCCGGGCTCGAGGCCCGCGGCGCCAACAACGCCCGGCTG ACGCTGGCCCGGGCCCTGGCGCTCCAGGCGCGCGGCGACCTTCCCGGAGCGAGGCAGGCCTTCGCTCGCGCGGCGGAAGC GTCCTGGCGCGATCCACGCTTCACCACCGCGTACGGCGAAGCCCTGATGGACGAAGGCCAGTACCCGCAGGCGGTGGAGG CCTTCGCCAAGGCCACCAGTGTCAACCCGGACCACCTGCTGGCCCGCGTGTCCACCGCGCTGGCCCACACCTACCAGGGG CGCAAGATGGAGGAAGCGCAGCAGGTGCTCTCCGGCGTGGAGGCCCGGGGCGCGGAGCTGACGCCCGGACTGAAGGCCCG CGCGGGCGCGCTGAAGGCAGAGCTGGCGCTGGCTCGCGGCGCGCCCGACGAGGCCCTCTCCGCCGCGGACGAAGCGCTGA AGGCCGTTCCCGATGAGCACTACGCCCTCTTCGCCCGGGCCCGGGCCCTGGCGGTGAAGCATGACGTCCAGGCCCGCGCG GCCTTCGAGGCGGCCGTGGCCCGGCGCCGCAATGCCCCCCTGCTCTACCTGGACGGCGCGCGGGCGCTGCAGACCGCTGG TGACACCGACGGCGCGGTGGCCCTGCTGGACGCGTACGAGGCCACCTTCGGTCCGGTGCAGACCACCACCCCGGACGGCA AGAAGGCTGGCCTCTTGGAGAAGGACAGCCGCTACTGGCTGGCGCGCGGCGGCGTGCTGGAGGCCGCCTCCCGTCAGGAC GATGCCCTGGTCGCCTACGACAAGGCCCTGGCGGCGCGCGGCGTGGAGCTGGCCCAGGCGCAGTACGCCAAGGGCGCGCT GCTGCTGGCGCGCAAGGACTACGAGGGAGCCCGCCCGCTGCTGGCCGCCGTGGCACCCGACAGCGGCGCGGGCACGATGG CGGAGGCCTACACCGCCATGGGGGACCTGCTCTTCGCGCAGGGCGAGCACGCCGCCGGCTGCCAGCACTACTTCTTCGGC CTCGCGCGAGAGCGGGCGCAGGGCACGCCCCGCGAGGCGCTGGCGGAGCGCGTGGAGGACATCCGGAAGCGGCTGGAGTC CGCCGGCCAGGCCAGCATGGCCAAGGCCTGGAAGGCGGAGTCGAGCTCGCTCCTAGAGTAG
Upstream 100 bases:
>100_bases CCCCCGTTGACAGTCGAGGGGACCGTTCCTATCTGAGCGCGGCTTCTATACCCGGCACAACGGCCGGCGCACATCCAACT CCAGCGCAGGGGACAGGTCC
Downstream 100 bases:
>100_bases GTCGGTGGGGCTGATGGACTCCGGCCGGGCGCGCACCACGCGCCACTCGCCGTCCTCTTCCTTCTCGAAGGCGCCTTCGA TGAGGTAGGCGTTCAGCACG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MGTEGRKDWQRRESLTSALVQVGVVAVLLAGAVVFFVHRGTVRKQTEEHLRAARTAAMRGNPADLARAMTELDALFQLDA EARDAQALAADIQTVLWLEHRQPGADAKAREHLSRAAQLESQSGERYGAHALHLLAAGKSAEAEQYLAGLEARGANNARL TLARALALQARGDLPGARQAFARAAEASWRDPRFTTAYGEALMDEGQYPQAVEAFAKATSVNPDHLLARVSTALAHTYQG RKMEEAQQVLSGVEARGAELTPGLKARAGALKAELALARGAPDEALSAADEALKAVPDEHYALFARARALAVKHDVQARA AFEAAVARRRNAPLLYLDGARALQTAGDTDGAVALLDAYEATFGPVQTTTPDGKKAGLLEKDSRYWLARGGVLEAASRQD DALVAYDKALAARGVELAQAQYAKGALLLARKDYEGARPLLAAVAPDSGAGTMAEAYTAMGDLLFAQGEHAAGCQHYFFG LARERAQGTPREALAERVEDIRKRLESAGQASMAKAWKAESSSLLE
Sequences:
>Translated_526_residues MGTEGRKDWQRRESLTSALVQVGVVAVLLAGAVVFFVHRGTVRKQTEEHLRAARTAAMRGNPADLARAMTELDALFQLDA EARDAQALAADIQTVLWLEHRQPGADAKAREHLSRAAQLESQSGERYGAHALHLLAAGKSAEAEQYLAGLEARGANNARL TLARALALQARGDLPGARQAFARAAEASWRDPRFTTAYGEALMDEGQYPQAVEAFAKATSVNPDHLLARVSTALAHTYQG RKMEEAQQVLSGVEARGAELTPGLKARAGALKAELALARGAPDEALSAADEALKAVPDEHYALFARARALAVKHDVQARA AFEAAVARRRNAPLLYLDGARALQTAGDTDGAVALLDAYEATFGPVQTTTPDGKKAGLLEKDSRYWLARGGVLEAASRQD DALVAYDKALAARGVELAQAQYAKGALLLARKDYEGARPLLAAVAPDSGAGTMAEAYTAMGDLLFAQGEHAAGCQHYFFG LARERAQGTPREALAERVEDIRKRLESAGQASMAKAWKAESSSLLE >Mature_525_residues GTEGRKDWQRRESLTSALVQVGVVAVLLAGAVVFFVHRGTVRKQTEEHLRAARTAAMRGNPADLARAMTELDALFQLDAE ARDAQALAADIQTVLWLEHRQPGADAKAREHLSRAAQLESQSGERYGAHALHLLAAGKSAEAEQYLAGLEARGANNARLT LARALALQARGDLPGARQAFARAAEASWRDPRFTTAYGEALMDEGQYPQAVEAFAKATSVNPDHLLARVSTALAHTYQGR KMEEAQQVLSGVEARGAELTPGLKARAGALKAELALARGAPDEALSAADEALKAVPDEHYALFARARALAVKHDVQARAA FEAAVARRRNAPLLYLDGARALQTAGDTDGAVALLDAYEATFGPVQTTTPDGKKAGLLEKDSRYWLARGGVLEAASRQDD ALVAYDKALAARGVELAQAQYAKGALLLARKDYEGARPLLAAVAPDSGAGTMAEAYTAMGDLLFAQGEHAAGCQHYFFGL ARERAQGTPREALAERVEDIRKRLESAGQASMAKAWKAESSSLLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56074; Mature: 55942
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTEGRKDWQRRESLTSALVQVGVVAVLLAGAVVFFVHRGTVRKQTEEHLRAARTAAMRG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC NPADLARAMTELDALFQLDAEARDAQALAADIQTVLWLEHRQPGADAKAREHLSRAAQLE CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SQSGERYGAHALHLLAAGKSAEAEQYLAGLEARGANNARLTLARALALQARGDLPGARQA HHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHH FARAAEASWRDPRFTTAYGEALMDEGQYPQAVEAFAKATSVNPDHLLARVSTALAHTYQG HHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC RKMEEAQQVLSGVEARGAELTPGLKARAGALKAELALARGAPDEALSAADEALKAVPDEH CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHH YALFARARALAVKHDVQARAAFEAAVARRRNAPLLYLDGARALQTAGDTDGAVALLDAYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCEEHHHHHH ATFGPVQTTTPDGKKAGLLEKDSRYWLARGGVLEAASRQDDALVAYDKALAARGVELAQA HCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHCCHHHHHH QYAKGALLLARKDYEGARPLLAAVAPDSGAGTMAEAYTAMGDLLFAQGEHAAGCQHYFFG HHHCCEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LARERAQGTPREALAERVEDIRKRLESAGQASMAKAWKAESSSLLE HHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure GTEGRKDWQRRESLTSALVQVGVVAVLLAGAVVFFVHRGTVRKQTEEHLRAARTAAMRG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC NPADLARAMTELDALFQLDAEARDAQALAADIQTVLWLEHRQPGADAKAREHLSRAAQLE CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SQSGERYGAHALHLLAAGKSAEAEQYLAGLEARGANNARLTLARALALQARGDLPGARQA HHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHH FARAAEASWRDPRFTTAYGEALMDEGQYPQAVEAFAKATSVNPDHLLARVSTALAHTYQG HHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC RKMEEAQQVLSGVEARGAELTPGLKARAGALKAELALARGAPDEALSAADEALKAVPDEH CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHH YALFARARALAVKHDVQARAAFEAAVARRRNAPLLYLDGARALQTAGDTDGAVALLDAYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCEEHHHHHH ATFGPVQTTTPDGKKAGLLEKDSRYWLARGGVLEAASRQDDALVAYDKALAARGVELAQA HCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHCCHHHHHH QYAKGALLLARKDYEGARPLLAAVAPDSGAGTMAEAYTAMGDLLFAQGEHAAGCQHYFFG HHHCCEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LARERAQGTPREALAERVEDIRKRLESAGQASMAKAWKAESSSLLE HHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA