Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is yedY [H]

Identifier: 108761935

GI number: 108761935

Start: 6517067

End: 6518857

Strand: Reverse

Name: yedY [H]

Synonym: MXAN_5219

Alternate gene names: 108761935

Gene position: 6518857-6517067 (Counterclockwise)

Preceding gene: 108763302

Following gene: 108759504

Centisome position: 71.32

GC content: 64.66

Gene sequence:

>1791_bases
ATGGCAGACCCACCGAAACCGACCGCCACGCCACCGCCGCCCTCTGGAGCCGACCGCGTCTCACCGGAGCTGGTGAAGGA
GCTGCGAGAGCGCCTCACCAAGGGCGAGGACGTCGTCGATCCGAAGACCTGGGCCGGCTCCATTCCGGCCGCCTTCGGTA
TCGCCCCTCGCCTGCGAATCGGCGCGAACCGTTGGTTCAACCTGGTCTGGCTGCTCCCGATCGGTTGGGGGCTTCTCCTG
TTCGGGGTCGCCGTAGCGCAGTATCTGCGCGGGCTCCCCGCGGTCGAAGGGTTCATCCACCGGCATCCCGGGACCGGGTT
CGCAACCGCGTTTGCCACGCCGATGCCGGTCTGGTTGCGCGCCCAGCATTTTCTGAACTTGTTCTTCCTCATCTTCATCA
TTCGCGCGGGCCTCCAGATCCTCGCCGACCATCCCCGGCTGTACTGGACCCGGCACTCGACGCCGGGAAAAGAGTGGCTC
CGGATGCAGAAGCAGGTGCCGGACCTGCCGCTCTGGACCGCCAAGCAGGACTCCCTCACGCTGCCCAAACATCTTGGGCT
TCCGGGCATCCGCCACTCAATCGGGCTGGCCCGCTGGTGGCACCTCGGGATCGATATGTTGTGGCTGGCGAACGGACTCG
TCTTCTACGTGCTGCTCTTCGCGACCGGAGAGTGGCGCCGCATCGTCCCGACGAACTGGCAGGTGTTCCCCGACGCCGCG
TCTGCTCTGCTCCAGTACCTCTCCCTGCGCTGGCCTCAGAACGATGGCTGGGTCGCGTACAACGGCCTCCAGATCATCGC
CTACTTCATCACGGTCTTCATCGCGGCGCCGCTCGCGCTCATGACCGGGCTCGGCATGTCGCCAGCGCTTTCGACCCGGT
TCCACGGCATCAGCAAGCGGCTCAGCATCCAGACCGCGCGCTCCCTGCACTTTCTCGTCCTGTGCTGGTTCATCCTCTTC
ACCTTCATCCATGTCACCATGGTCTTCGCGACCGGCCTGCTGCGAAACTTGAACCACGTGTACGCGGGGACCGACGCCAA
CGATTGGGTCGGGTTTGGCATCTTCGCTGTCTCCATGGCGGTCGTCGTGATCGCGTGGGTGGCGGCCACGCCGTTCACGC
TGCGACATCCGCGGGTCGTGCAACGCGTCGGGTATTCGCTGATCGGCCCGGCCCAGCGGCTCTTCGAGCACCTCGACGCC
AAGCCAGGGACCTACACGGACAAGGACATCTCGCCGTACTTCTGGCACAACGGCAAGTACCCCGAGACGCCGGAGTACCG
CGCGCTCTTCGACAACCACTTCGCCGATTACCGGCTACGAATTCACGGGCTCGTCGAGAATCCGGTCGAGCTGAGCCTCG
ACGAGCTGCGCGCCATGCCGCGCCACGAGCAGATCACGCAGCACTTCTGCATCCAGGGCTGGTCCGGTGTCGCCAAGTGG
GGCGGCGTCTCGATGCAGACCCTCCTCGAGCTGGTCAGGCCGAAGCCCGACGCGAAATGGGTCGTGTTCTACTCGCTCGG
CGACGGTTCCGACGGCGGCCGCTACTACGACGCGCATCCCATCGCGCAGATGCACTATCAGCTCACGATGCTCGCCTATG
ACATGAACGGCGAGCCGCTTTCTTACGGCCACGGGGCGCCGCTTCGCCTGCGCAACGAGGTCCAGCTCGGCTTCAAGCAA
GTGAAGTGGATTGCCGGCATCGAGTTCGTCGCTGACTTCTTCGAAGTGGGAGGCGGCTACGGCGGCTACGATGAAGATCA
CGAGTTCTTCGGGTATCGTCAGTCGATCTGA

Upstream 100 bases:

>100_bases
GCAGCGATGCCTGCCGATGTGCAACTCATGCAGAGGAGGCGGTTCGCTCTCGCTCTAGGGGAGCCGCGCGAAGCCGAGTC
GCCGCTCAGGAGCCCGTGAA

Downstream 100 bases:

>100_bases
GTCGGGTGCGAAGGAATGGGCGCGCTCCTCGATGGTTTGCTCCCCCCATTTTCGGACCCGTTGAAGCGTGAGAGCGTCCT
CGCGGCGAGGAGGCCGGTCG

Product: molybdopterin-binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MADPPKPTATPPPPSGADRVSPELVKELRERLTKGEDVVDPKTWAGSIPAAFGIAPRLRIGANRWFNLVWLLPIGWGLLL
FGVAVAQYLRGLPAVEGFIHRHPGTGFATAFATPMPVWLRAQHFLNLFFLIFIIRAGLQILADHPRLYWTRHSTPGKEWL
RMQKQVPDLPLWTAKQDSLTLPKHLGLPGIRHSIGLARWWHLGIDMLWLANGLVFYVLLFATGEWRRIVPTNWQVFPDAA
SALLQYLSLRWPQNDGWVAYNGLQIIAYFITVFIAAPLALMTGLGMSPALSTRFHGISKRLSIQTARSLHFLVLCWFILF
TFIHVTMVFATGLLRNLNHVYAGTDANDWVGFGIFAVSMAVVVIAWVAATPFTLRHPRVVQRVGYSLIGPAQRLFEHLDA
KPGTYTDKDISPYFWHNGKYPETPEYRALFDNHFADYRLRIHGLVENPVELSLDELRAMPRHEQITQHFCIQGWSGVAKW
GGVSMQTLLELVRPKPDAKWVVFYSLGDGSDGGRYYDAHPIAQMHYQLTMLAYDMNGEPLSYGHGAPLRLRNEVQLGFKQ
VKWIAGIEFVADFFEVGGGYGGYDEDHEFFGYRQSI

Sequences:

>Translated_596_residues
MADPPKPTATPPPPSGADRVSPELVKELRERLTKGEDVVDPKTWAGSIPAAFGIAPRLRIGANRWFNLVWLLPIGWGLLL
FGVAVAQYLRGLPAVEGFIHRHPGTGFATAFATPMPVWLRAQHFLNLFFLIFIIRAGLQILADHPRLYWTRHSTPGKEWL
RMQKQVPDLPLWTAKQDSLTLPKHLGLPGIRHSIGLARWWHLGIDMLWLANGLVFYVLLFATGEWRRIVPTNWQVFPDAA
SALLQYLSLRWPQNDGWVAYNGLQIIAYFITVFIAAPLALMTGLGMSPALSTRFHGISKRLSIQTARSLHFLVLCWFILF
TFIHVTMVFATGLLRNLNHVYAGTDANDWVGFGIFAVSMAVVVIAWVAATPFTLRHPRVVQRVGYSLIGPAQRLFEHLDA
KPGTYTDKDISPYFWHNGKYPETPEYRALFDNHFADYRLRIHGLVENPVELSLDELRAMPRHEQITQHFCIQGWSGVAKW
GGVSMQTLLELVRPKPDAKWVVFYSLGDGSDGGRYYDAHPIAQMHYQLTMLAYDMNGEPLSYGHGAPLRLRNEVQLGFKQ
VKWIAGIEFVADFFEVGGGYGGYDEDHEFFGYRQSI
>Mature_595_residues
ADPPKPTATPPPPSGADRVSPELVKELRERLTKGEDVVDPKTWAGSIPAAFGIAPRLRIGANRWFNLVWLLPIGWGLLLF
GVAVAQYLRGLPAVEGFIHRHPGTGFATAFATPMPVWLRAQHFLNLFFLIFIIRAGLQILADHPRLYWTRHSTPGKEWLR
MQKQVPDLPLWTAKQDSLTLPKHLGLPGIRHSIGLARWWHLGIDMLWLANGLVFYVLLFATGEWRRIVPTNWQVFPDAAS
ALLQYLSLRWPQNDGWVAYNGLQIIAYFITVFIAAPLALMTGLGMSPALSTRFHGISKRLSIQTARSLHFLVLCWFILFT
FIHVTMVFATGLLRNLNHVYAGTDANDWVGFGIFAVSMAVVVIAWVAATPFTLRHPRVVQRVGYSLIGPAQRLFEHLDAK
PGTYTDKDISPYFWHNGKYPETPEYRALFDNHFADYRLRIHGLVENPVELSLDELRAMPRHEQITQHFCIQGWSGVAKWG
GVSMQTLLELVRPKPDAKWVVFYSLGDGSDGGRYYDAHPIAQMHYQLTMLAYDMNGEPLSYGHGAPLRLRNEVQLGFKQV
KWIAGIEFVADFFEVGGGYGGYDEDHEFFGYRQSI

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=148, Percent_Identity=30.4054054054054, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 67436; Mature: 67305

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPPKPTATPPPPSGADRVSPELVKELRERLTKGEDVVDPKTWAGSIPAAFGIAPRLRI
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEE
GANRWFNLVWLLPIGWGLLLFGVAVAQYLRGLPAVEGFIHRHPGTGFATAFATPMPVWLR
CCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHCCCCHHHHH
AQHFLNLFFLIFIIRAGLQILADHPRLYWTRHSTPGKEWLRMQKQVPDLPLWTAKQDSLT
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCC
LPKHLGLPGIRHSIGLARWWHLGIDMLWLANGLVFYVLLFATGEWRRIVPTNWQVFPDAA
CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEECHHHH
SALLQYLSLRWPQNDGWVAYNGLQIIAYFITVFIAAPLALMTGLGMSPALSTRFHGISKR
HHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LSIQTARSLHFLVLCWFILFTFIHVTMVFATGLLRNLNHVYAGTDANDWVGFGIFAVSMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHH
VVVIAWVAATPFTLRHPRVVQRVGYSLIGPAQRLFEHLDAKPGTYTDKDISPYFWHNGKY
HHHHHHHHCCCCCCCCHHHHHHCCCHHCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCC
PETPEYRALFDNHFADYRLRIHGLVENPVELSLDELRAMPRHEQITQHFCIQGWSGVAKW
CCCCCHHHHHHCCCCCEEEEEEEECCCCHHCCHHHHHCCCCHHHHHHHHHHCCCCCHHHC
GGVSMQTLLELVRPKPDAKWVVFYSLGDGSDGGRYYDAHPIAQMHYQLTMLAYDMNGEPL
CCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEECCCCHHHHHEEEEEEEEECCCCCC
SYGHGAPLRLRNEVQLGFKQVKWIAGIEFVADFFEVGGGYGGYDEDHEFFGYRQSI
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHCCC
>Mature Secondary Structure 
ADPPKPTATPPPPSGADRVSPELVKELRERLTKGEDVVDPKTWAGSIPAAFGIAPRLRI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEE
GANRWFNLVWLLPIGWGLLLFGVAVAQYLRGLPAVEGFIHRHPGTGFATAFATPMPVWLR
CCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHCCCCHHHHH
AQHFLNLFFLIFIIRAGLQILADHPRLYWTRHSTPGKEWLRMQKQVPDLPLWTAKQDSLT
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCC
LPKHLGLPGIRHSIGLARWWHLGIDMLWLANGLVFYVLLFATGEWRRIVPTNWQVFPDAA
CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEECHHHH
SALLQYLSLRWPQNDGWVAYNGLQIIAYFITVFIAAPLALMTGLGMSPALSTRFHGISKR
HHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LSIQTARSLHFLVLCWFILFTFIHVTMVFATGLLRNLNHVYAGTDANDWVGFGIFAVSMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHH
VVVIAWVAATPFTLRHPRVVQRVGYSLIGPAQRLFEHLDAKPGTYTDKDISPYFWHNGKY
HHHHHHHHCCCCCCCCHHHHHHCCCHHCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCC
PETPEYRALFDNHFADYRLRIHGLVENPVELSLDELRAMPRHEQITQHFCIQGWSGVAKW
CCCCCHHHHHHCCCCCEEEEEEEECCCCHHCCHHHHHCCCCHHHHHHHHHHCCCCCHHHC
GGVSMQTLLELVRPKPDAKWVVFYSLGDGSDGGRYYDAHPIAQMHYQLTMLAYDMNGEPL
CCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEECCCCHHHHHEEEEEEEEECCCCCC
SYGHGAPLRLRNEVQLGFKQVKWIAGIEFVADFFEVGGGYGGYDEDHEFFGYRQSI
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14500908 [H]