| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759504
Identifier: 108759504
GI number: 108759504
Start: 6514981
End: 6516483
Strand: Reverse
Name: 108759504
Synonym: MXAN_5218
Alternate gene names: NA
Gene position: 6516483-6514981 (Counterclockwise)
Preceding gene: 108761935
Following gene: 108757513
Centisome position: 71.3
GC content: 66.73
Gene sequence:
>1503_bases GTGCGTTCTTCGAATCTCTCCACGCCCCGTCTCCACCTGTCCTGGTGGCCCCTGGTGCTCATCGCTTCAGGTGCATGGCT GCTGCGCATCGCGGGCTTCTTCCACCGGGGAGGCGCTTTCGGGCATGCCGTGGACTACGACGAGGGCGTCTATTTCAGTG CCGCCGCACTTCTTTCCCATGGTGTATTGCCCTACCGTGACTACTTCTTCGTCCACCCTCCTGGGATTGCCATGTTGCTG GCGCCGGTGGCCGCGCTCGCACGTGGCTTCGACGCAGCGCTGGCATTCGCAGTGGTCCGTTGGCTCGTCCCCGGGATCGG GGCACTGAGCACGCTCCTGTGCGGACGCATTGCTCAGGAGCAATGGGGAGTCAGGGCAGGCGTCGTGGCCGCGCTCGCCT ATGCCGTCTTCCCAGAAGCGGCCGCCACCGAGCGTGGGCCCTTCCTGGAGCCACTGCTCAACCTCGCCTGTCTTGGCATG GCATGGGTTTGGCTGCGGCATGGGGCTGATGTCTCACGGTGGAAGGGGGATCTGCTGGCCGGAGCCCTTCTTGCCACCGC GTGCGCCATCAAACTGACAGCCGGCGCTTGGGTCATCGCCGCGGTGTGGGCTCGCGGCATGGAGGGCCAGGGACGGCGTG CCCTACGGGTCGTGCTTGTCGCGGCAGCCGTGGGGCTGGTCTGGCTGGGCCCCTTCTTCGCGCTCGCCCCCGCCGCGATG CTCGATGGCCTTCTTCGGTTCCAGTTGCTCCGCCCTCCCGATGGCGAGTCAGATGTCTGGCGCCGGCTTCTCATGGTTCT GGGAGACGGGCGCATGGGCTTCTCCGTCCTCTGTGTATGGGGCTTGGTCGTGGCCCTGGCCCGAACTCGTCGAAGGGAGG CCGTCGCCGAGCGACTCTTCGCGGCCGCCTGGGTTCTGACGCTCGTGACCTTCTTGTCGTCGAAGAGCTATTGGGCCCAG TACAACGCCAACCTGGCGCCTACCATGGCGGTCCTCGCGGGGTTGGGGGCCTCCGTCGTGTTGAGCTGGGCGGACACGCG CTCGCGCACGCAAGCCGCGCTCGTCACCGCCACGGTGATGCTCATCGCACTCTCACCGCTGCCGGCGGCTATCCGCTCTG CGAATCAGCGAGACCGTTTCCTGCTCACGCTCGGGAGCTCACTCCGGGCCTCCGTCCCCCCGGATTCAGCCCTTTGCACC TTCGAACCGGCGTGGGCAATCGCCGCCGGGCGGCTTCCCGGAATCCCAGAGGGGACTCCCATCCTCGTCGACCCCTATGG CCTCATGCTGAATGATGCACTGGGCACCCCCGGGCGCTTCGCTCACGCAGGAGCCGCTTTCGAGGATGAGCGCTCGCAGC GGACGATGCTCCCCATGCTTGCGCGCTGTGACATCCTGGTCCTTGAGGGACGTGGCGAATGGCAGCTGTCCTCCGCCAGC GAGCGCTGGGTCCATGAGCACTTCGTGCGAGAAGGGCTCTTCTGGCGGCGTGCTTCTGAGTGA
Upstream 100 bases:
>100_bases ATTCAGTGAGTCAAGTCAGGAGTTCGACTGGCGATGTGCGCTGCATGAACTGACTTGTGCCTTCTCGACACACCGGGATG CCTTTAGTACGCGTGTCCGG
Downstream 100 bases:
>100_bases AGTCTCGGAAGCTGGAGGGGGCGAGCGACTCTGGAGCACCGGGACTGTCCACTGCGCGTGCAAGGCTGGCCACGGCGCGA GGGACTCCAGGCTGCGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MRSSNLSTPRLHLSWWPLVLIASGAWLLRIAGFFHRGGAFGHAVDYDEGVYFSAAALLSHGVLPYRDYFFVHPPGIAMLL APVAALARGFDAALAFAVVRWLVPGIGALSTLLCGRIAQEQWGVRAGVVAALAYAVFPEAAATERGPFLEPLLNLACLGM AWVWLRHGADVSRWKGDLLAGALLATACAIKLTAGAWVIAAVWARGMEGQGRRALRVVLVAAAVGLVWLGPFFALAPAAM LDGLLRFQLLRPPDGESDVWRRLLMVLGDGRMGFSVLCVWGLVVALARTRRREAVAERLFAAAWVLTLVTFLSSKSYWAQ YNANLAPTMAVLAGLGASVVLSWADTRSRTQAALVTATVMLIALSPLPAAIRSANQRDRFLLTLGSSLRASVPPDSALCT FEPAWAIAAGRLPGIPEGTPILVDPYGLMLNDALGTPGRFAHAGAAFEDERSQRTMLPMLARCDILVLEGRGEWQLSSAS ERWVHEHFVREGLFWRRASE
Sequences:
>Translated_500_residues MRSSNLSTPRLHLSWWPLVLIASGAWLLRIAGFFHRGGAFGHAVDYDEGVYFSAAALLSHGVLPYRDYFFVHPPGIAMLL APVAALARGFDAALAFAVVRWLVPGIGALSTLLCGRIAQEQWGVRAGVVAALAYAVFPEAAATERGPFLEPLLNLACLGM AWVWLRHGADVSRWKGDLLAGALLATACAIKLTAGAWVIAAVWARGMEGQGRRALRVVLVAAAVGLVWLGPFFALAPAAM LDGLLRFQLLRPPDGESDVWRRLLMVLGDGRMGFSVLCVWGLVVALARTRRREAVAERLFAAAWVLTLVTFLSSKSYWAQ YNANLAPTMAVLAGLGASVVLSWADTRSRTQAALVTATVMLIALSPLPAAIRSANQRDRFLLTLGSSLRASVPPDSALCT FEPAWAIAAGRLPGIPEGTPILVDPYGLMLNDALGTPGRFAHAGAAFEDERSQRTMLPMLARCDILVLEGRGEWQLSSAS ERWVHEHFVREGLFWRRASE >Mature_500_residues MRSSNLSTPRLHLSWWPLVLIASGAWLLRIAGFFHRGGAFGHAVDYDEGVYFSAAALLSHGVLPYRDYFFVHPPGIAMLL APVAALARGFDAALAFAVVRWLVPGIGALSTLLCGRIAQEQWGVRAGVVAALAYAVFPEAAATERGPFLEPLLNLACLGM AWVWLRHGADVSRWKGDLLAGALLATACAIKLTAGAWVIAAVWARGMEGQGRRALRVVLVAAAVGLVWLGPFFALAPAAM LDGLLRFQLLRPPDGESDVWRRLLMVLGDGRMGFSVLCVWGLVVALARTRRREAVAERLFAAAWVLTLVTFLSSKSYWAQ YNANLAPTMAVLAGLGASVVLSWADTRSRTQAALVTATVMLIALSPLPAAIRSANQRDRFLLTLGSSLRASVPPDSALCT FEPAWAIAAGRLPGIPEGTPILVDPYGLMLNDALGTPGRFAHAGAAFEDERSQRTMLPMLARCDILVLEGRGEWQLSSAS ERWVHEHFVREGLFWRRASE
Specific function: Unknown
COG id: COG5305
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54008; Mature: 54008
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSNLSTPRLHLSWWPLVLIASGAWLLRIAGFFHRGGAFGHAVDYDEGVYFSAAALLSH CCCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHC GVLPYRDYFFVHPPGIAMLLAPVAALARGFDAALAFAVVRWLVPGIGALSTLLCGRIAQE CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QWGVRAGVVAALAYAVFPEAAATERGPFLEPLLNLACLGMAWVWLRHGADVSRWKGDLLA HHCHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GALLATACAIKLTAGAWVIAAVWARGMEGQGRRALRVVLVAAAVGLVWLGPFFALAPAAM HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDGLLRFQLLRPPDGESDVWRRLLMVLGDGRMGFSVLCVWGLVVALARTRRREAVAERLF HHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAWVLTLVTFLSSKSYWAQYNANLAPTMAVLAGLGASVVLSWADTRSRTQAALVTATVM HHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCCHHHEEEEHHHHHHHHHHHHHHHHH LIALSPLPAAIRSANQRDRFLLTLGSSLRASVPPDSALCTFEPAWAIAAGRLPGIPEGTP HHHHCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCC ILVDPYGLMLNDALGTPGRFAHAGAAFEDERSQRTMLPMLARCDILVLEGRGEWQLSSAS EEECCCHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEECCHH ERWVHEHFVREGLFWRRASE HHHHHHHHHHHCHHHHCCCC >Mature Secondary Structure MRSSNLSTPRLHLSWWPLVLIASGAWLLRIAGFFHRGGAFGHAVDYDEGVYFSAAALLSH CCCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHC GVLPYRDYFFVHPPGIAMLLAPVAALARGFDAALAFAVVRWLVPGIGALSTLLCGRIAQE CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QWGVRAGVVAALAYAVFPEAAATERGPFLEPLLNLACLGMAWVWLRHGADVSRWKGDLLA HHCHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GALLATACAIKLTAGAWVIAAVWARGMEGQGRRALRVVLVAAAVGLVWLGPFFALAPAAM HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDGLLRFQLLRPPDGESDVWRRLLMVLGDGRMGFSVLCVWGLVVALARTRRREAVAERLF HHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAWVLTLVTFLSSKSYWAQYNANLAPTMAVLAGLGASVVLSWADTRSRTQAALVTATVM HHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCCHHHEEEEHHHHHHHHHHHHHHHHH LIALSPLPAAIRSANQRDRFLLTLGSSLRASVPPDSALCTFEPAWAIAAGRLPGIPEGTP HHHHCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCC ILVDPYGLMLNDALGTPGRFAHAGAAFEDERSQRTMLPMLARCDILVLEGRGEWQLSSAS EEECCCHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEECCHH ERWVHEHFVREGLFWRRASE HHHHHHHHHHHCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA